RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 SPRR2EP22531 72 aa6.34□□□□□ -1.39
POLR2E-201ENST00000215587 SPRR2BP35325 72 aa6.34□□□□□ -1.39
POLR2E-201ENST00000215587 SPRR2AP35326 72 aa6.34□□□□□ -1.39
POLR2E-201ENST00000215587 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
POLR2E-201ENST00000215587 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
POLR2E-201ENST00000215587 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
POLR2E-201ENST00000215587 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
POLR2E-201ENST00000215587 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
POLR2E-201ENST00000215587 SPRR2DP22532 72 aa6.14□□□□□ -1.43
POLR2E-201ENST00000215587 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
POLR2E-201ENST00000215587 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
POLR2E-201ENST00000215587 MT1EP04732 61 aa6.07□□□□□ -1.44
POLR2E-201ENST00000215587 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
POLR2E-201ENST00000215587 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
POLR2E-201ENST00000215587 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
POLR2E-201ENST00000215587 MT1LQ93083 61 aa5.93□□□□□ -1.46
POLR2E-201ENST00000215587 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.46
POLR2E-201ENST00000215587 MT1GP13640 62 aa5.82□□□□□ -1.48
POLR2E-201ENST00000215587 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
POLR2E-201ENST00000215587 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
POLR2E-201ENST00000215587 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
POLR2E-201ENST00000215587 MT1MQ8N339 61 aa5.74□□□□□ -1.49
POLR2E-201ENST00000215587 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
POLR2E-201ENST00000215587 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
POLR2E-201ENST00000215587 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.51
POLR2E-201ENST00000215587 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
POLR2E-201ENST00000215587 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
POLR2E-201ENST00000215587 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
POLR2E-201ENST00000215587 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
POLR2E-201ENST00000215587 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
POLR2E-201ENST00000215587 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
POLR2E-201ENST00000215587 MT4P47944 62 aa5.42□□□□□ -1.54
POLR2E-201ENST00000215587 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
POLR2E-201ENST00000215587 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
POLR2E-201ENST00000215587 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
POLR2E-201ENST00000215587 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
POLR2E-201ENST00000215587 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
POLR2E-201ENST00000215587 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
POLR2E-201ENST00000215587 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
POLR2E-201ENST00000215587 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
POLR2E-201ENST00000215587 MT1AP04731 61 aa5.06□□□□□ -1.6
POLR2E-201ENST00000215587 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
POLR2E-201ENST00000215587 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
POLR2E-201ENST00000215587 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
POLR2E-201ENST00000215587 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
POLR2E-201ENST00000215587 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
POLR2E-201ENST00000215587 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
POLR2E-201ENST00000215587 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
POLR2E-201ENST00000215587 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
POLR2E-201ENST00000215587 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
POLR2E-201ENST00000215587 H3BS24 57 aa4.67□□□□□ -1.66
POLR2E-201ENST00000215587 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
POLR2E-201ENST00000215587 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
POLR2E-201ENST00000215587 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
POLR2E-201ENST00000215587 MT3P25713 68 aa4.61□□□□□ -1.67
POLR2E-201ENST00000215587 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
POLR2E-201ENST00000215587 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
POLR2E-201ENST00000215587 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
POLR2E-201ENST00000215587 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
POLR2E-201ENST00000215587 INE1O15225 51 aa4.28□□□□□ -1.72
POLR2E-201ENST00000215587 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
POLR2E-201ENST00000215587 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
POLR2E-201ENST00000215587 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
POLR2E-201ENST00000215587 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
POLR2E-201ENST00000215587 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
POLR2E-201ENST00000215587 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
POLR2E-201ENST00000215587 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
POLR2E-201ENST00000215587 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
POLR2E-201ENST00000215587 PRM1P04553 51 aa3.47□□□□□ -1.85
POLR2E-201ENST00000215587 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
POLR2E-201ENST00000215587 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
POLR2E-201ENST00000215587 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
POLR2E-201ENST00000215587 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
POLR2E-201ENST00000215587 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
POLR2E-201ENST00000215587 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
POLR2E-201ENST00000215587 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
POLR2E-201ENST00000215587 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
POLR2E-201ENST00000215587 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 83.9 ms