RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
TMED1-201ENST00000214869 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
TMED1-201ENST00000214869 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
TMED1-201ENST00000214869 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
TMED1-201ENST00000214869 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
TMED1-201ENST00000214869 MT1LQ93083 61 aa5.62□□□□□ -1.51
TMED1-201ENST00000214869 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
TMED1-201ENST00000214869 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
TMED1-201ENST00000214869 SPRR2EP22531 72 aa5.54□□□□□ -1.52
TMED1-201ENST00000214869 SPRR2BP35325 72 aa5.54□□□□□ -1.52
TMED1-201ENST00000214869 SPRR2AP35326 72 aa5.54□□□□□ -1.52
TMED1-201ENST00000214869 MT1GP13640 62 aa5.52□□□□□ -1.53
TMED1-201ENST00000214869 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
TMED1-201ENST00000214869 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
TMED1-201ENST00000214869 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
TMED1-201ENST00000214869 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
TMED1-201ENST00000214869 MT1MQ8N339 61 aa5.44□□□□□ -1.54
TMED1-201ENST00000214869 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
TMED1-201ENST00000214869 SPRR2DP22532 72 aa5.35□□□□□ -1.55
TMED1-201ENST00000214869 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
TMED1-201ENST00000214869 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
TMED1-201ENST00000214869 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
TMED1-201ENST00000214869 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
TMED1-201ENST00000214869 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.58
TMED1-201ENST00000214869 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
TMED1-201ENST00000214869 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
TMED1-201ENST00000214869 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
TMED1-201ENST00000214869 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
TMED1-201ENST00000214869 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
TMED1-201ENST00000214869 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
TMED1-201ENST00000214869 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
TMED1-201ENST00000214869 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
TMED1-201ENST00000214869 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
TMED1-201ENST00000214869 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
TMED1-201ENST00000214869 H3BS24 57 aa4.79□□□□□ -1.64
TMED1-201ENST00000214869 MT1AP04731 61 aa4.79□□□□□ -1.64
TMED1-201ENST00000214869 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
TMED1-201ENST00000214869 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
TMED1-201ENST00000214869 MT4P47944 62 aa4.71□□□□□ -1.66
TMED1-201ENST00000214869 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
TMED1-201ENST00000214869 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
TMED1-201ENST00000214869 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
TMED1-201ENST00000214869 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
TMED1-201ENST00000214869 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
TMED1-201ENST00000214869 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
TMED1-201ENST00000214869 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
TMED1-201ENST00000214869 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
TMED1-201ENST00000214869 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.69
TMED1-201ENST00000214869 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
TMED1-201ENST00000214869 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
TMED1-201ENST00000214869 MT3P25713 68 aa4.34□□□□□ -1.71
TMED1-201ENST00000214869 INE1O15225 51 aa4.28□□□□□ -1.72
TMED1-201ENST00000214869 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
TMED1-201ENST00000214869 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
TMED1-201ENST00000214869 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
TMED1-201ENST00000214869 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
TMED1-201ENST00000214869 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
TMED1-201ENST00000214869 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
TMED1-201ENST00000214869 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
TMED1-201ENST00000214869 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
TMED1-201ENST00000214869 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
TMED1-201ENST00000214869 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
TMED1-201ENST00000214869 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TMED1-201ENST00000214869 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
TMED1-201ENST00000214869 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
TMED1-201ENST00000214869 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
TMED1-201ENST00000214869 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
TMED1-201ENST00000214869 PRM1P04553 51 aa3.33□□□□□ -1.88
TMED1-201ENST00000214869 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
TMED1-201ENST00000214869 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
TMED1-201ENST00000214869 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
TMED1-201ENST00000214869 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
TMED1-201ENST00000214869 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
TMED1-201ENST00000214869 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
TMED1-201ENST00000214869 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
TMED1-201ENST00000214869 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TMED1-201ENST00000214869 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms