RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
MRPL28-201ENST00000199706 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
MRPL28-201ENST00000199706 K7ERS5 55 aa6.32□□□□□ -1.4
MRPL28-201ENST00000199706 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
MRPL28-201ENST00000199706 MT1GP13640 62 aa6.29□□□□□ -1.4
MRPL28-201ENST00000199706 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
MRPL28-201ENST00000199706 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
MRPL28-201ENST00000199706 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
MRPL28-201ENST00000199706 MT1LQ93083 61 aa6.22□□□□□ -1.41
MRPL28-201ENST00000199706 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
MRPL28-201ENST00000199706 MT1MQ8N339 61 aa6.16□□□□□ -1.42
MRPL28-201ENST00000199706 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
MRPL28-201ENST00000199706 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
MRPL28-201ENST00000199706 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
MRPL28-201ENST00000199706 H3BS24 57 aa5.99□□□□□ -1.45
MRPL28-201ENST00000199706 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
MRPL28-201ENST00000199706 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
MRPL28-201ENST00000199706 ROMO1P60602 79 aa5.9□□□□□ -1.46
MRPL28-201ENST00000199706 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
MRPL28-201ENST00000199706 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
MRPL28-201ENST00000199706 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
MRPL28-201ENST00000199706 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
MRPL28-201ENST00000199706 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
MRPL28-201ENST00000199706 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
MRPL28-201ENST00000199706 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
MRPL28-201ENST00000199706 HMCN1Q96RW7 5635 aa5.75□□□□□ -1.49
MRPL28-201ENST00000199706 GPR98Q8WXG9 6306 aa5.67□□□□□ -1.5
MRPL28-201ENST00000199706 MT4P47944 62 aa5.67□□□□□ -1.5
MRPL28-201ENST00000199706 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
MRPL28-201ENST00000199706 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
MRPL28-201ENST00000199706 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
MRPL28-201ENST00000199706 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
MRPL28-201ENST00000199706 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
MRPL28-201ENST00000199706 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
MRPL28-201ENST00000199706 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
MRPL28-201ENST00000199706 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
MRPL28-201ENST00000199706 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
MRPL28-201ENST00000199706 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
MRPL28-201ENST00000199706 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
MRPL28-201ENST00000199706 MT1AP04731 61 aa5.32□□□□□ -1.56
MRPL28-201ENST00000199706 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
MRPL28-201ENST00000199706 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
MRPL28-201ENST00000199706 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
MRPL28-201ENST00000199706 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
MRPL28-201ENST00000199706 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
MRPL28-201ENST00000199706 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
MRPL28-201ENST00000199706 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
MRPL28-201ENST00000199706 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
MRPL28-201ENST00000199706 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
MRPL28-201ENST00000199706 MT3P25713 68 aa4.85□□□□□ -1.63
MRPL28-201ENST00000199706 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
MRPL28-201ENST00000199706 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
MRPL28-201ENST00000199706 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
MRPL28-201ENST00000199706 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
MRPL28-201ENST00000199706 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
MRPL28-201ENST00000199706 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
MRPL28-201ENST00000199706 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
MRPL28-201ENST00000199706 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
MRPL28-201ENST00000199706 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
MRPL28-201ENST00000199706 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
MRPL28-201ENST00000199706 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
MRPL28-201ENST00000199706 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
MRPL28-201ENST00000199706 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
MRPL28-201ENST00000199706 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
MRPL28-201ENST00000199706 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
MRPL28-201ENST00000199706 INE1O15225 51 aa3.93□□□□□ -1.78
MRPL28-201ENST00000199706 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
MRPL28-201ENST00000199706 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
MRPL28-201ENST00000199706 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
MRPL28-201ENST00000199706 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
MRPL28-201ENST00000199706 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
MRPL28-201ENST00000199706 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
MRPL28-201ENST00000199706 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
MRPL28-201ENST00000199706 PRM1P04553 51 aa2.99□□□□□ -1.93
MRPL28-201ENST00000199706 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
MRPL28-201ENST00000199706 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
MRPL28-201ENST00000199706 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms