RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Anapc1P53995 1944 aaKnown RBP13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Ncor1Q60974 2453 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Igkv4-70A0A0B4J1I5 116 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Cfc1P97766 202 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Ndufa4Q62425 82 aaKnown RBP13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Pou2af1Q64693 256 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Pip4p2Q9CZX7 257 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Trav9d-1A0A075B699 112 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Pde6hP61249 83 aa13.36□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Trav4d-3A0A075B625 110 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Myo7bQ99MZ6 2113 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 MyofQ69ZN7 2048 aaKnown RBP13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Igkv13-84A0A140T8N3 115 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Rnf125Q9D9R0 233 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Tnfrsf13bQ9ET35 249 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Ighv3-8A0A075B5T0 131 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 MsmpB1AWI6 139 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 BC107364E9Q5A2 140 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Ccl6P27784 116 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Ang5Q5GAN1 145 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 RtbdnQ8QZY4 247 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Klf13Q9JJZ6 289 aa13.35□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Lynx1P0DP60 116 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Q4KKZ1 196 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 MgamB5THE2 1827 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Trdv5A0A075B661 115 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Gm33815A0A087WNV3 176 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 EpopQ7TNS8 369 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Tcl1b4P56844 120 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Igkv4-62A0A0G2JDW9 117 aa13.34□□□□□ -0.27
Col17a1-201ENSMUST00000026045 Igsf23B2RTN2 239 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Rnf166Q3U9F6 237 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 A0A286YE02 88 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Tctex1d4Q8CDY7 219 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gata1P17679 413 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Lypd8Q9D7S0 255 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gata3P23772 443 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Tmem210Q9D2F0 147 aa13.33□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Sptbn1Q62261 2363 aaKnown RBP13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 4930442H23RikQ9D5G7 103 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Ccl24Q9JKC0 119 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Frem1Q684R7 2191 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Spink1P09036 80 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Prdm6Q3UZD5 596 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Med12A2AGH6 2190 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Cox8cA6H666 72 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Ly6lH3BJG9 140 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Akap6E9Q9K8 2307 aa13.32□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Cd24P24807 76 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Armcx4E9PWM3 2356 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm17660B9UIU9 90 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm28038F7BCN9 126 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Ly6c1P0CW02 131 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 4930415O20RikQ8CDT5 131 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 RhohQ9D3G9 191 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Igkv19-93A0A0G2JFZ3 115 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm17455G3UW87 128 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Atp5g3P56384 141 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Atp5g1Q9CR84 136 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 TncQ80YX1 2110 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Igkv2-137A0A0B4J1H6 120 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Abca1P41233 2261 aa13.31□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Znrd1Q791N7 123 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Fam24aQ8CF27 98 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Igkv5-37A0A140T8N4 115 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 P0C1Z5 52 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Fstl3Q9EQC7 256 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 PoleQ9WVF7 2283 aa13.3□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Trav7-6A0A075B640 112 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm15294V9GXA7 121 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Smim10l1A0A087WNQ7 89 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Sdhaf1Q3U276 118 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 IappP12968 93 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Shisal2aA2A9G7 189 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Vpreb1P13372 142 aa13.29□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Olfr313Q5NC55 308 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 CtrlQ9ER05 264 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 BtcQ05928 177 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm17334Q8C6U3 126 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Fam241bQ9D882 120 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm29666A0A087WQ99 126 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 P01726 129 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Cd27P41272 250 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Chchd5Q9CQP3 110 aa13.28□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Gm9936Q8C864 160 aa13.27□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Ahctf1Q8CJF7 2243 aaKnown RBP13.27□□□□□ -0.28
Col17a1-201ENSMUST00000026045 UrahQ9CRB3 118 aa13.27□□□□□ -0.28
Col17a1-201ENSMUST00000026045 Ptprz1B9EKR1 2312 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Ighv1-19A0A0A6YWX0 117 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Nxph4G3X9N5 304 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Rnf183Q8QZS5 190 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Igkv14-130A0A0G2JF45 117 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Ovol1Q9WTJ2 267 aa13.27□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Tex26Q0VB26 296 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Lyg1Q9D7Q0 197 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Spry4Q9WTP2 300 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Ighv1-81A0A075B5Y4 117 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Med12lQ8BQM9 2157 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Alms1Q8K4E0 3251 aa13.26□□□□□ -0.29
Col17a1-201ENSMUST00000026045 5730522E02RikQ5SP45 163 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 80.8 ms