RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 TEN1Q86WV5 123 aa3.54□□□□□ -1.84
SCARB2-226ENST00000640916 ZCCHC13Q8WW36 166 aaKnown RBP3.54□□□□□ -1.84
SCARB2-226ENST00000640916 UQCR10Q9UDW1 63 aa3.54□□□□□ -1.84
SCARB2-226ENST00000640916 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
SCARB2-226ENST00000640916 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
SCARB2-226ENST00000640916 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
SCARB2-226ENST00000640916 H0YGX0 51 aa3.52□□□□□ -1.85
SCARB2-226ENST00000640916 TMEM256-PLSCR3K7ERE1 68 aa3.52□□□□□ -1.85
SCARB2-226ENST00000640916 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
SCARB2-226ENST00000640916 SNCGO76070 127 aa3.51□□□□□ -1.85
SCARB2-226ENST00000640916 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
SCARB2-226ENST00000640916 H3BMG7 143 aa3.5□□□□□ -1.85
SCARB2-226ENST00000640916 DNAL4O96015 105 aa3.5□□□□□ -1.85
SCARB2-226ENST00000640916 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
SCARB2-226ENST00000640916 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
SCARB2-226ENST00000640916 FAM236AA0A1B0GUQ0 79 aa3.49□□□□□ -1.85
SCARB2-226ENST00000640916 FAM236BA0A1B0GV22 79 aa3.49□□□□□ -1.85
SCARB2-226ENST00000640916 ADM2Q7Z4H4 148 aa3.49□□□□□ -1.85
SCARB2-226ENST00000640916 PPDPFLQ8WWR9 84 aa3.49□□□□□ -1.85
SCARB2-226ENST00000640916 K7ERS5 55 aa3.48□□□□□ -1.85
SCARB2-226ENST00000640916 COX6CP09669 75 aa3.48□□□□□ -1.85
SCARB2-226ENST00000640916 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
SCARB2-226ENST00000640916 ORMDL1Q9P0S3 153 aa3.48□□□□□ -1.85
SCARB2-226ENST00000640916 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
SCARB2-226ENST00000640916 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
SCARB2-226ENST00000640916 HIST1H4AP62805 103 aaKnown RBP3.45□□□□□ -1.86
SCARB2-226ENST00000640916 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
SCARB2-226ENST00000640916 CCKP06307 115 aa3.44□□□□□ -1.86
SCARB2-226ENST00000640916 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
SCARB2-226ENST00000640916 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
SCARB2-226ENST00000640916 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SCARB2-226ENST00000640916 TRACP01848 142 aa3.43□□□□□ -1.86
SCARB2-226ENST00000640916 BAALC-AS2P0C853 105 aa3.43□□□□□ -1.86
SCARB2-226ENST00000640916 GTF2H5Q6ZYL4 71 aa3.43□□□□□ -1.86
SCARB2-226ENST00000640916 A6NED7 52 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 UQCRQO14949 82 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 ATXN8Q156A1 80 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
SCARB2-226ENST00000640916 TRBV7-4A0A0J9YYF1 115 aa3.4□□□□□ -1.87
SCARB2-226ENST00000640916 TMEM258P61165 79 aa3.4□□□□□ -1.87
SCARB2-226ENST00000640916 MT1XP80297 61 aa3.4□□□□□ -1.87
SCARB2-226ENST00000640916 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
SCARB2-226ENST00000640916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SCARB2-226ENST00000640916 SPANXA2-OT1Q8N9U9 137 aa3.39□□□□□ -1.87
SCARB2-226ENST00000640916 DSCR8Q96T75 97 aa3.39□□□□□ -1.87
SCARB2-226ENST00000640916 H3BQ85 93 aa3.38□□□□□ -1.87
SCARB2-226ENST00000640916 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
SCARB2-226ENST00000640916 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
SCARB2-226ENST00000640916 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
SCARB2-226ENST00000640916 C14orf132Q9NPU4 83 aa3.38□□□□□ -1.87
SCARB2-226ENST00000640916 IGKV3D-7A0A0C4DH55 119 aa3.36□□□□□ -1.87
SCARB2-226ENST00000640916 Q6ZQT0 140 aa3.36□□□□□ -1.87
SCARB2-226ENST00000640916 Q5W150 140 aa3.35□□□□□ -1.87
SCARB2-226ENST00000640916 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
SCARB2-226ENST00000640916 LOC110117498A0A087WWA1 95 aa3.33□□□□□ -1.88
SCARB2-226ENST00000640916 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
SCARB2-226ENST00000640916 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
SCARB2-226ENST00000640916 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
SCARB2-226ENST00000640916 H3BT86 120 aa3.31□□□□□ -1.88
SCARB2-226ENST00000640916 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
SCARB2-226ENST00000640916 C1orf64Q8NEQ6 169 aa3.31□□□□□ -1.88
SCARB2-226ENST00000640916 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
SCARB2-226ENST00000640916 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
SCARB2-226ENST00000640916 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
SCARB2-226ENST00000640916 NDUFB1O75438 58 aa3.29□□□□□ -1.88
SCARB2-226ENST00000640916 NREPQ16612 68 aa3.29□□□□□ -1.88
SCARB2-226ENST00000640916 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
SCARB2-226ENST00000640916 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
SCARB2-226ENST00000640916 PDE6GP18545 87 aa3.28□□□□□ -1.88
SCARB2-226ENST00000640916 K7EP34 96 aa3.27□□□□□ -1.89
SCARB2-226ENST00000640916 K7EQZ3 153 aa3.27□□□□□ -1.89
SCARB2-226ENST00000640916 Q8N9L7 120 aa3.27□□□□□ -1.89
SCARB2-226ENST00000640916 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
SCARB2-226ENST00000640916 H3BPC8 53 aa3.26□□□□□ -1.89
SCARB2-226ENST00000640916 S4R3F8 94 aa3.26□□□□□ -1.89
SCARB2-226ENST00000640916 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
SCARB2-226ENST00000640916 MMP24-AS1A0A0U1RRL7 71 aa3.25□□□□□ -1.89
SCARB2-226ENST00000640916 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
SCARB2-226ENST00000640916 hDV103S1A0JD37 113 aa3.22□□□□□ -1.89
SCARB2-226ENST00000640916 MT4P47944 62 aa3.22□□□□□ -1.89
SCARB2-226ENST00000640916 MRPL34Q9BQ48 92 aaKnown RBP3.22□□□□□ -1.89
SCARB2-226ENST00000640916 A0A1B0GU33 70 aa3.21□□□□□ -1.9
SCARB2-226ENST00000640916 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
SCARB2-226ENST00000640916 ROMO1P60602 79 aa3.21□□□□□ -1.9
SCARB2-226ENST00000640916 TMEM254Q8TBM7 123 aa3.21□□□□□ -1.9
SCARB2-226ENST00000640916 ETDBQ3ZM63 59 aa3.2□□□□□ -1.9
SCARB2-226ENST00000640916 HCG22E2RYF7 251 aa3.19□□□□□ -1.9
SCARB2-226ENST00000640916 CASC2Q6XLA1 102 aa3.19□□□□□ -1.9
SCARB2-226ENST00000640916 UBL5Q9BZL1 73 aa3.18□□□□□ -1.9
SCARB2-226ENST00000640916 F8W1H4 67 aa3.16□□□□□ -1.9
SCARB2-226ENST00000640916 COX7CP15954 63 aa3.16□□□□□ -1.9
SCARB2-226ENST00000640916 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
SCARB2-226ENST00000640916 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
SCARB2-226ENST00000640916 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
SCARB2-226ENST00000640916 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
SCARB2-226ENST00000640916 A0A087WVE0 104 aa3.12□□□□□ -1.91
SCARB2-226ENST00000640916 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
SCARB2-226ENST00000640916 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms