RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 TNP1P09430 55 aa4.1□□□□□ -1.75
HNRNPU-222ENST00000639880 DNAH8Q96JB1 4490 aa4.1□□□□□ -1.75
HNRNPU-222ENST00000639880 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
HNRNPU-222ENST00000639880 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.75
HNRNPU-222ENST00000639880 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
HNRNPU-222ENST00000639880 FAT1Q14517 4588 aa4.08□□□□□ -1.76
HNRNPU-222ENST00000639880 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
HNRNPU-222ENST00000639880 DNAH2Q9P225 4427 aa4.05□□□□□ -1.76
HNRNPU-222ENST00000639880 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
HNRNPU-222ENST00000639880 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
HNRNPU-222ENST00000639880 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
HNRNPU-222ENST00000639880 FRAS1Q86XX4 4008 aa4.01□□□□□ -1.77
HNRNPU-222ENST00000639880 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
HNRNPU-222ENST00000639880 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
HNRNPU-222ENST00000639880 DNAH3Q8TD57 4116 aa4□□□□□ -1.77
HNRNPU-222ENST00000639880 DYNC1H1Q14204 4646 aaKnown RBP3.98□□□□□ -1.77
HNRNPU-222ENST00000639880 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
HNRNPU-222ENST00000639880 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
HNRNPU-222ENST00000639880 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
HNRNPU-222ENST00000639880 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
HNRNPU-222ENST00000639880 ALMS1Q8TCU4 4167 aa3.94□□□□□ -1.78
HNRNPU-222ENST00000639880 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
HNRNPU-222ENST00000639880 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
HNRNPU-222ENST00000639880 HECTD4Q9Y4D8 3996 aa3.91□□□□□ -1.78
HNRNPU-222ENST00000639880 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
HNRNPU-222ENST00000639880 RYR1P21817 5038 aa3.86□□□□□ -1.79
HNRNPU-222ENST00000639880 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.8
HNRNPU-222ENST00000639880 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.8
HNRNPU-222ENST00000639880 HYDINQ4G0P3 5121 aa3.83□□□□□ -1.8
HNRNPU-222ENST00000639880 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
HNRNPU-222ENST00000639880 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
HNRNPU-222ENST00000639880 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
HNRNPU-222ENST00000639880 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
HNRNPU-222ENST00000639880 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
HNRNPU-222ENST00000639880 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
HNRNPU-222ENST00000639880 RYR3Q15413 4870 aa3.75□□□□□ -1.81
HNRNPU-222ENST00000639880 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
HNRNPU-222ENST00000639880 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
HNRNPU-222ENST00000639880 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
HNRNPU-222ENST00000639880 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
HNRNPU-222ENST00000639880 LRP2P98164 4655 aa3.67□□□□□ -1.82
HNRNPU-222ENST00000639880 PKD1P98161 4303 aa3.64□□□□□ -1.83
HNRNPU-222ENST00000639880 RYR2Q92736 4967 aa3.63□□□□□ -1.83
HNRNPU-222ENST00000639880 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
HNRNPU-222ENST00000639880 HSPG2P98160 4391 aa3.55□□□□□ -1.84
HNRNPU-222ENST00000639880 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
HNRNPU-222ENST00000639880 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
HNRNPU-222ENST00000639880 LPAP08519 4548 aa3.52□□□□□ -1.85
HNRNPU-222ENST00000639880 HERC2O95714 4834 aa3.51□□□□□ -1.85
HNRNPU-222ENST00000639880 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
HNRNPU-222ENST00000639880 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
HNRNPU-222ENST00000639880 MT1HP80294 61 aa3.44□□□□□ -1.86
HNRNPU-222ENST00000639880 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
HNRNPU-222ENST00000639880 TNXBP22105 4242 aa3.42□□□□□ -1.86
HNRNPU-222ENST00000639880 MT2AP02795 61 aa3.42□□□□□ -1.86
HNRNPU-222ENST00000639880 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
HNRNPU-222ENST00000639880 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
HNRNPU-222ENST00000639880 MT1FP04733 61 aa3.39□□□□□ -1.87
HNRNPU-222ENST00000639880 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
HNRNPU-222ENST00000639880 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
HNRNPU-222ENST00000639880 INE1O15225 51 aa3.3□□□□□ -1.88
HNRNPU-222ENST00000639880 MUC2Q02817 5179 aa3.3□□□□□ -1.88
HNRNPU-222ENST00000639880 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
HNRNPU-222ENST00000639880 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.89
HNRNPU-222ENST00000639880 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
HNRNPU-222ENST00000639880 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
HNRNPU-222ENST00000639880 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
HNRNPU-222ENST00000639880 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
HNRNPU-222ENST00000639880 HERC1Q15751 4861 aa3.24□□□□□ -1.89
HNRNPU-222ENST00000639880 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
HNRNPU-222ENST00000639880 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
HNRNPU-222ENST00000639880 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
HNRNPU-222ENST00000639880 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
HNRNPU-222ENST00000639880 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
HNRNPU-222ENST00000639880 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
HNRNPU-222ENST00000639880 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
HNRNPU-222ENST00000639880 RNF213Q63HN8 5207 aa3.19□□□□□ -1.9
HNRNPU-222ENST00000639880 MT1XP80297 61 aa3.18□□□□□ -1.9
HNRNPU-222ENST00000639880 MT1BP07438 61 aa3.17□□□□□ -1.9
HNRNPU-222ENST00000639880 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
HNRNPU-222ENST00000639880 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
HNRNPU-222ENST00000639880 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
HNRNPU-222ENST00000639880 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
HNRNPU-222ENST00000639880 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
HNRNPU-222ENST00000639880 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
HNRNPU-222ENST00000639880 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
HNRNPU-222ENST00000639880 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
HNRNPU-222ENST00000639880 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
HNRNPU-222ENST00000639880 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
HNRNPU-222ENST00000639880 KRTAP4-8Q9BYQ9 185 aa3.07□□□□□ -1.92
HNRNPU-222ENST00000639880 LCE2BO14633 110 aa2.98□□□□□ -1.93
HNRNPU-222ENST00000639880 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
HNRNPU-222ENST00000639880 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
HNRNPU-222ENST00000639880 MT1GP13640 62 aa2.87□□□□□ -1.95
HNRNPU-222ENST00000639880 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
HNRNPU-222ENST00000639880 USH2AO75445 5202 aa2.85□□□□□ -1.95
HNRNPU-222ENST00000639880 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
HNRNPU-222ENST00000639880 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
HNRNPU-222ENST00000639880 MT1LQ93083 61 aa2.82□□□□□ -1.96
HNRNPU-222ENST00000639880 KMT2DO14686 5537 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms