RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
SMARCA2-266ENST00000639760 LRP1BQ9NZR2 4599 aa5.24□□□□□ -1.57
SMARCA2-266ENST00000639760 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
SMARCA2-266ENST00000639760 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
SMARCA2-266ENST00000639760 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
SMARCA2-266ENST00000639760 M0QZ58 72 aa5.21□□□□□ -1.58
SMARCA2-266ENST00000639760 KRTAP10-1P60331 282 aa5.16□□□□□ -1.58
SMARCA2-266ENST00000639760 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
SMARCA2-266ENST00000639760 SACSQ9NZJ4 4579 aa5.12□□□□□ -1.59
SMARCA2-266ENST00000639760 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
SMARCA2-266ENST00000639760 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
SMARCA2-266ENST00000639760 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
SMARCA2-266ENST00000639760 PKHD1L1Q86WI1 4243 aa5.07□□□□□ -1.6
SMARCA2-266ENST00000639760 PKHD1P08F94 4074 aa5.06□□□□□ -1.6
SMARCA2-266ENST00000639760 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
SMARCA2-266ENST00000639760 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
SMARCA2-266ENST00000639760 PKD1P98161 4303 aa5.01□□□□□ -1.61
SMARCA2-266ENST00000639760 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
SMARCA2-266ENST00000639760 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
SMARCA2-266ENST00000639760 R4GN34 69 aa4.95□□□□□ -1.62
SMARCA2-266ENST00000639760 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
SMARCA2-266ENST00000639760 INE1O15225 51 aa4.88□□□□□ -1.63
SMARCA2-266ENST00000639760 HSPG2P98160 4391 aa4.88□□□□□ -1.63
SMARCA2-266ENST00000639760 J3QL48 77 aa4.87□□□□□ -1.63
SMARCA2-266ENST00000639760 TNXBP22105 4242 aa4.86□□□□□ -1.63
SMARCA2-266ENST00000639760 SMR3BP02814 79 aaPredicted RBP4.84□□□□□ -1.63
SMARCA2-266ENST00000639760 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.64
SMARCA2-266ENST00000639760 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
SMARCA2-266ENST00000639760 KRTAP10-4P60372 401 aaPredicted RBP4.77□□□□□ -1.65
SMARCA2-266ENST00000639760 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
SMARCA2-266ENST00000639760 FAT1Q14517 4588 aa4.74□□□□□ -1.65
SMARCA2-266ENST00000639760 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
SMARCA2-266ENST00000639760 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
SMARCA2-266ENST00000639760 TNP1P09430 55 aa4.68□□□□□ -1.66
SMARCA2-266ENST00000639760 LPAP08519 4548 aa4.64□□□□□ -1.67
SMARCA2-266ENST00000639760 Q5VSD8 79 aa4.61□□□□□ -1.67
SMARCA2-266ENST00000639760 DNHD1Q96M86 4753 aa4.59□□□□□ -1.68
SMARCA2-266ENST00000639760 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
SMARCA2-266ENST00000639760 LRP2P98164 4655 aa4.48□□□□□ -1.69
SMARCA2-266ENST00000639760 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
SMARCA2-266ENST00000639760 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
SMARCA2-266ENST00000639760 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
SMARCA2-266ENST00000639760 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
SMARCA2-266ENST00000639760 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
SMARCA2-266ENST00000639760 MUC17Q685J3 4493 aa4.3□□□□□ -1.72
SMARCA2-266ENST00000639760 RYR2Q92736 4967 aa4.29□□□□□ -1.72
SMARCA2-266ENST00000639760 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
SMARCA2-266ENST00000639760 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
SMARCA2-266ENST00000639760 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
SMARCA2-266ENST00000639760 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
SMARCA2-266ENST00000639760 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
SMARCA2-266ENST00000639760 HERC1Q15751 4861 aa4.16□□□□□ -1.74
SMARCA2-266ENST00000639760 RYR1P21817 5038 aa4.15□□□□□ -1.74
SMARCA2-266ENST00000639760 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
SMARCA2-266ENST00000639760 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
SMARCA2-266ENST00000639760 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
SMARCA2-266ENST00000639760 RYR3Q15413 4870 aa4.04□□□□□ -1.76
SMARCA2-266ENST00000639760 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
SMARCA2-266ENST00000639760 ABCA13Q86UQ4 5058 aa4.01□□□□□ -1.77
SMARCA2-266ENST00000639760 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
SMARCA2-266ENST00000639760 KIAA1109Q2LD37 5005 aa3.99□□□□□ -1.77
SMARCA2-266ENST00000639760 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
SMARCA2-266ENST00000639760 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
SMARCA2-266ENST00000639760 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
SMARCA2-266ENST00000639760 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
SMARCA2-266ENST00000639760 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
SMARCA2-266ENST00000639760 KRTAP4-5Q9BYR2 181 aa3.9□□□□□ -1.79
SMARCA2-266ENST00000639760 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
SMARCA2-266ENST00000639760 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
SMARCA2-266ENST00000639760 MT1XP80297 61 aa3.83□□□□□ -1.8
SMARCA2-266ENST00000639760 HERC2O95714 4834 aa3.81□□□□□ -1.8
SMARCA2-266ENST00000639760 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
SMARCA2-266ENST00000639760 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SMARCA2-266ENST00000639760 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
SMARCA2-266ENST00000639760 LCE2BO14633 110 aa3.78□□□□□ -1.8
SMARCA2-266ENST00000639760 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
SMARCA2-266ENST00000639760 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
SMARCA2-266ENST00000639760 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
SMARCA2-266ENST00000639760 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
SMARCA2-266ENST00000639760 M0R2T5 61 aa3.73□□□□□ -1.81
SMARCA2-266ENST00000639760 MT1BP07438 61 aa3.71□□□□□ -1.82
SMARCA2-266ENST00000639760 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
SMARCA2-266ENST00000639760 MT1FP04733 61 aa3.7□□□□□ -1.82
SMARCA2-266ENST00000639760 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
SMARCA2-266ENST00000639760 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
SMARCA2-266ENST00000639760 MT2AP02795 61 aa3.66□□□□□ -1.82
SMARCA2-266ENST00000639760 LCE2AQ5TA79 106 aaPredicted RBP3.65□□□□□ -1.83
SMARCA2-266ENST00000639760 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
SMARCA2-266ENST00000639760 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
SMARCA2-266ENST00000639760 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
SMARCA2-266ENST00000639760 MT1HP80294 61 aa3.55□□□□□ -1.84
SMARCA2-266ENST00000639760 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
SMARCA2-266ENST00000639760 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
SMARCA2-266ENST00000639760 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
SMARCA2-266ENST00000639760 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.86
SMARCA2-266ENST00000639760 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.86
SMARCA2-266ENST00000639760 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.86
SMARCA2-266ENST00000639760 KMT2DO14686 5537 aa3.4□□□□□ -1.86
SMARCA2-266ENST00000639760 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
SMARCA2-266ENST00000639760 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms