RNA–Protein interactions for RNA: ENST00000639601.1

KCNMA1-266, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 11,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-266ENST00000639601 CMYA5Q8N3K9 4069 aa3.46□□□□□ -1.86
KCNMA1-266ENST00000639601 DNAH1Q9P2D7 4330 aa3.46□□□□□ -1.86
KCNMA1-266ENST00000639601 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
KCNMA1-266ENST00000639601 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
KCNMA1-266ENST00000639601 MT1HL1P0DM35 61 aa3.44□□□□□ -1.86
KCNMA1-266ENST00000639601 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
KCNMA1-266ENST00000639601 DNAH2Q9P225 4427 aa3.42□□□□□ -1.86
KCNMA1-266ENST00000639601 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
KCNMA1-266ENST00000639601 DNHD1Q96M86 4753 aa3.37□□□□□ -1.87
KCNMA1-266ENST00000639601 PLECQ15149 4684 aaKnown RBP3.36□□□□□ -1.87
KCNMA1-266ENST00000639601 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
KCNMA1-266ENST00000639601 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
KCNMA1-266ENST00000639601 DNAH8Q96JB1 4490 aa3.31□□□□□ -1.88
KCNMA1-266ENST00000639601 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
KCNMA1-266ENST00000639601 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
KCNMA1-266ENST00000639601 VPS13DQ5THJ4 4388 aa3.27□□□□□ -1.89
KCNMA1-266ENST00000639601 PRKDCP78527 4128 aaKnown RBP3.26□□□□□ -1.89
KCNMA1-266ENST00000639601 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
KCNMA1-266ENST00000639601 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
KCNMA1-266ENST00000639601 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
KCNMA1-266ENST00000639601 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
KCNMA1-266ENST00000639601 LORP23490 312 aaPredicted RBP3.2□□□□□ -1.9
KCNMA1-266ENST00000639601 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
KCNMA1-266ENST00000639601 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
KCNMA1-266ENST00000639601 SACSQ9NZJ4 4579 aa3.18□□□□□ -1.9
KCNMA1-266ENST00000639601 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
KCNMA1-266ENST00000639601 MT3P25713 68 aa3.17□□□□□ -1.9
KCNMA1-266ENST00000639601 STARD9Q9P2P6 4700 aa3.17□□□□□ -1.9
KCNMA1-266ENST00000639601 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
KCNMA1-266ENST00000639601 KIAA1109Q2LD37 5005 aa3.16□□□□□ -1.9
KCNMA1-266ENST00000639601 KMT2AQ03164 3969 aa3.15□□□□□ -1.91
KCNMA1-266ENST00000639601 MYCBP2O75592 4640 aa3.15□□□□□ -1.91
KCNMA1-266ENST00000639601 RYR3Q15413 4870 aa3.14□□□□□ -1.91
KCNMA1-266ENST00000639601 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
KCNMA1-266ENST00000639601 DYNC2H1Q8NCM8 4307 aaKnown RBP3.13□□□□□ -1.91
KCNMA1-266ENST00000639601 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
KCNMA1-266ENST00000639601 HYDINQ4G0P3 5121 aa3.12□□□□□ -1.91
KCNMA1-266ENST00000639601 FRAS1Q86XX4 4008 aa3.11□□□□□ -1.91
KCNMA1-266ENST00000639601 FAT1Q14517 4588 aa3.1□□□□□ -1.91
KCNMA1-266ENST00000639601 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
KCNMA1-266ENST00000639601 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
KCNMA1-266ENST00000639601 FAT2Q9NYQ8 4349 aa3.05□□□□□ -1.92
KCNMA1-266ENST00000639601 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
KCNMA1-266ENST00000639601 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
KCNMA1-266ENST00000639601 RYR2Q92736 4967 aa3□□□□□ -1.93
KCNMA1-266ENST00000639601 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
KCNMA1-266ENST00000639601 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
KCNMA1-266ENST00000639601 PKD1P98161 4303 aa2.97□□□□□ -1.93
KCNMA1-266ENST00000639601 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
KCNMA1-266ENST00000639601 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
KCNMA1-266ENST00000639601 MT2AP02795 61 aa2.94□□□□□ -1.94
KCNMA1-266ENST00000639601 EPPK1P58107 5090 aaKnown RBP2.92□□□□□ -1.94
KCNMA1-266ENST00000639601 MT1FP04733 61 aa2.9□□□□□ -1.95
KCNMA1-266ENST00000639601 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
KCNMA1-266ENST00000639601 MT1HP80294 61 aa2.89□□□□□ -1.95
KCNMA1-266ENST00000639601 FAT3Q8TDW7 4589 aa2.88□□□□□ -1.95
KCNMA1-266ENST00000639601 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
KCNMA1-266ENST00000639601 LRP2P98164 4655 aa2.87□□□□□ -1.95
KCNMA1-266ENST00000639601 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
KCNMA1-266ENST00000639601 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.96
KCNMA1-266ENST00000639601 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.96
KCNMA1-266ENST00000639601 HERC2O95714 4834 aa2.83□□□□□ -1.96
KCNMA1-266ENST00000639601 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
KCNMA1-266ENST00000639601 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
KCNMA1-266ENST00000639601 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
KCNMA1-266ENST00000639601 HSPG2P98160 4391 aa2.81□□□□□ -1.96
KCNMA1-266ENST00000639601 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
KCNMA1-266ENST00000639601 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
KCNMA1-266ENST00000639601 KMT2CQ8NEZ4 4911 aaKnown RBP2.8□□□□□ -1.96
KCNMA1-266ENST00000639601 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
KCNMA1-266ENST00000639601 KRTAP17-1Q9BYP8 105 aa2.78□□□□□ -1.96
KCNMA1-266ENST00000639601 HERC1Q15751 4861 aa2.77□□□□□ -1.97
KCNMA1-266ENST00000639601 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
KCNMA1-266ENST00000639601 MT1XP80297 61 aa2.75□□□□□ -1.97
KCNMA1-266ENST00000639601 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
KCNMA1-266ENST00000639601 MT1BP07438 61 aa2.68□□□□□ -1.98
KCNMA1-266ENST00000639601 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
KCNMA1-266ENST00000639601 TNXBP22105 4242 aa2.64□□□□□ -1.99
KCNMA1-266ENST00000639601 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
KCNMA1-266ENST00000639601 KRTAP9-8Q9BYQ0 159 aa2.62□□□□□ -1.99
KCNMA1-266ENST00000639601 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
KCNMA1-266ENST00000639601 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
KCNMA1-266ENST00000639601 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
KCNMA1-266ENST00000639601 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
KCNMA1-266ENST00000639601 KRTAP12-4P60329 112 aa2.57□□□□□ -2
KCNMA1-266ENST00000639601 LCE3BQ5TA77 95 aa2.53□□□□□ -2
KCNMA1-266ENST00000639601 HMCN2Q8NDA2 5059 aa2.52□□□□□ -2.01
KCNMA1-266ENST00000639601 MT1GP13640 62 aa2.51□□□□□ -2.01
KCNMA1-266ENST00000639601 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
KCNMA1-266ENST00000639601 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
KCNMA1-266ENST00000639601 MT1LQ93083 61 aa2.49□□□□□ -2.01
KCNMA1-266ENST00000639601 MUC2Q02817 5179 aa2.46□□□□□ -2.02
KCNMA1-266ENST00000639601 USH2AO75445 5202 aa2.45□□□□□ -2.02
KCNMA1-266ENST00000639601 MT1EP04732 61 aa2.45□□□□□ -2.02
KCNMA1-266ENST00000639601 LCE2BO14633 110 aa2.44□□□□□ -2.02
KCNMA1-266ENST00000639601 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
KCNMA1-266ENST00000639601 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
KCNMA1-266ENST00000639601 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
KCNMA1-266ENST00000639601 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.02
KCNMA1-266ENST00000639601 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms