RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
UBE3A-226ENST00000637886 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
UBE3A-226ENST00000637886 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
UBE3A-226ENST00000637886 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
UBE3A-226ENST00000637886 LYSTQ99698 3801 aa5.13□□□□□ -1.59
UBE3A-226ENST00000637886 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
UBE3A-226ENST00000637886 DNAH1Q9P2D7 4330 aa5.11□□□□□ -1.59
UBE3A-226ENST00000637886 DNAH7Q8WXX0 4024 aa5.09□□□□□ -1.59
UBE3A-226ENST00000637886 SPRR2EP22531 72 aa5.06□□□□□ -1.6
UBE3A-226ENST00000637886 SPRR2BP35325 72 aa5.06□□□□□ -1.6
UBE3A-226ENST00000637886 SPRR2AP35326 72 aa5.06□□□□□ -1.6
UBE3A-226ENST00000637886 ZNF469Q96JG9 3925 aaPredicted RBP5.01□□□□□ -1.61
UBE3A-226ENST00000637886 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
UBE3A-226ENST00000637886 ANK2Q01484 3957 aa4.99□□□□□ -1.61
UBE3A-226ENST00000637886 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
UBE3A-226ENST00000637886 KRTAP12-4P60329 112 aa4.96□□□□□ -1.61
UBE3A-226ENST00000637886 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
UBE3A-226ENST00000637886 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
UBE3A-226ENST00000637886 MT1HP80294 61 aa4.94□□□□□ -1.62
UBE3A-226ENST00000637886 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
UBE3A-226ENST00000637886 SPRR2DP22532 72 aa4.93□□□□□ -1.62
UBE3A-226ENST00000637886 DNAH2Q9P225 4427 aa4.89□□□□□ -1.63
UBE3A-226ENST00000637886 LCE2BO14633 110 aa4.88□□□□□ -1.63
UBE3A-226ENST00000637886 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
UBE3A-226ENST00000637886 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
UBE3A-226ENST00000637886 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
UBE3A-226ENST00000637886 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
UBE3A-226ENST00000637886 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
UBE3A-226ENST00000637886 KMT2AQ03164 3969 aa4.83□□□□□ -1.64
UBE3A-226ENST00000637886 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
UBE3A-226ENST00000637886 MT2AP02795 61 aa4.77□□□□□ -1.65
UBE3A-226ENST00000637886 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
UBE3A-226ENST00000637886 HECTD4Q9Y4D8 3996 aa4.69□□□□□ -1.66
UBE3A-226ENST00000637886 LCE2CQ5TA81 110 aa4.65□□□□□ -1.66
UBE3A-226ENST00000637886 MT1FP04733 61 aa4.62□□□□□ -1.67
UBE3A-226ENST00000637886 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
UBE3A-226ENST00000637886 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
UBE3A-226ENST00000637886 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
UBE3A-226ENST00000637886 MT1GP13640 62 aa4.54□□□□□ -1.68
UBE3A-226ENST00000637886 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
UBE3A-226ENST00000637886 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
UBE3A-226ENST00000637886 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
UBE3A-226ENST00000637886 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
UBE3A-226ENST00000637886 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
UBE3A-226ENST00000637886 MT3P25713 68 aa4.41□□□□□ -1.7
UBE3A-226ENST00000637886 MT4P47944 62 aa4.34□□□□□ -1.71
UBE3A-226ENST00000637886 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
UBE3A-226ENST00000637886 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
UBE3A-226ENST00000637886 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
UBE3A-226ENST00000637886 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
UBE3A-226ENST00000637886 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
UBE3A-226ENST00000637886 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
UBE3A-226ENST00000637886 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
UBE3A-226ENST00000637886 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
UBE3A-226ENST00000637886 MT1XP80297 61 aa4.22□□□□□ -1.73
UBE3A-226ENST00000637886 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
UBE3A-226ENST00000637886 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
UBE3A-226ENST00000637886 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
UBE3A-226ENST00000637886 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
UBE3A-226ENST00000637886 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
UBE3A-226ENST00000637886 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
UBE3A-226ENST00000637886 MT1LQ93083 61 aa4.11□□□□□ -1.75
UBE3A-226ENST00000637886 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
UBE3A-226ENST00000637886 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.76
UBE3A-226ENST00000637886 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.76
UBE3A-226ENST00000637886 PRM1P04553 51 aa4.06□□□□□ -1.76
UBE3A-226ENST00000637886 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
UBE3A-226ENST00000637886 DNAH5Q8TE73 4624 aa3.99□□□□□ -1.77
UBE3A-226ENST00000637886 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
UBE3A-226ENST00000637886 MT1BP07438 61 aa3.99□□□□□ -1.77
UBE3A-226ENST00000637886 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
UBE3A-226ENST00000637886 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
UBE3A-226ENST00000637886 STARD9Q9P2P6 4700 aa3.93□□□□□ -1.78
UBE3A-226ENST00000637886 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
UBE3A-226ENST00000637886 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
UBE3A-226ENST00000637886 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
UBE3A-226ENST00000637886 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
UBE3A-226ENST00000637886 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
UBE3A-226ENST00000637886 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
UBE3A-226ENST00000637886 PKD1P98161 4303 aa3.91□□□□□ -1.78
UBE3A-226ENST00000637886 MT1EP04732 61 aa3.9□□□□□ -1.79
UBE3A-226ENST00000637886 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
UBE3A-226ENST00000637886 MT1MQ8N339 61 aa3.85□□□□□ -1.79
UBE3A-226ENST00000637886 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
UBE3A-226ENST00000637886 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
UBE3A-226ENST00000637886 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
UBE3A-226ENST00000637886 FAT1Q14517 4588 aa3.81□□□□□ -1.8
UBE3A-226ENST00000637886 SACSQ9NZJ4 4579 aa3.77□□□□□ -1.81
UBE3A-226ENST00000637886 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
UBE3A-226ENST00000637886 LPAP08519 4548 aa3.75□□□□□ -1.81
UBE3A-226ENST00000637886 HSPG2P98160 4391 aa3.75□□□□□ -1.81
UBE3A-226ENST00000637886 TNXBP22105 4242 aa3.74□□□□□ -1.81
UBE3A-226ENST00000637886 DYNC1H1Q14204 4646 aaKnown RBP3.73□□□□□ -1.81
UBE3A-226ENST00000637886 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
UBE3A-226ENST00000637886 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
UBE3A-226ENST00000637886 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
UBE3A-226ENST00000637886 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
UBE3A-226ENST00000637886 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
UBE3A-226ENST00000637886 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.83
UBE3A-226ENST00000637886 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms