RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
GABRB3-219ENST00000636466 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
GABRB3-219ENST00000636466 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
GABRB3-219ENST00000636466 FAT1Q14517 4588 aa6.7□□□□□ -1.34
GABRB3-219ENST00000636466 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
GABRB3-219ENST00000636466 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.34
GABRB3-219ENST00000636466 DNAH7Q8WXX0 4024 aa6.65□□□□□ -1.34
GABRB3-219ENST00000636466 DNAH3Q8TD57 4116 aa6.62□□□□□ -1.35
GABRB3-219ENST00000636466 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
GABRB3-219ENST00000636466 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
GABRB3-219ENST00000636466 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
GABRB3-219ENST00000636466 RYR1P21817 5038 aa6.53□□□□□ -1.36
GABRB3-219ENST00000636466 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
GABRB3-219ENST00000636466 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
GABRB3-219ENST00000636466 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
GABRB3-219ENST00000636466 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
GABRB3-219ENST00000636466 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
GABRB3-219ENST00000636466 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
GABRB3-219ENST00000636466 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
GABRB3-219ENST00000636466 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
GABRB3-219ENST00000636466 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
GABRB3-219ENST00000636466 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
GABRB3-219ENST00000636466 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
GABRB3-219ENST00000636466 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
GABRB3-219ENST00000636466 FAT3Q8TDW7 4589 aa6.32□□□□□ -1.4
GABRB3-219ENST00000636466 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
GABRB3-219ENST00000636466 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
GABRB3-219ENST00000636466 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
GABRB3-219ENST00000636466 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
GABRB3-219ENST00000636466 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
GABRB3-219ENST00000636466 RYR3Q15413 4870 aa6.26□□□□□ -1.41
GABRB3-219ENST00000636466 DYNC2H1Q8NCM8 4307 aaKnown RBP6.25□□□□□ -1.41
GABRB3-219ENST00000636466 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
GABRB3-219ENST00000636466 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
GABRB3-219ENST00000636466 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.42
GABRB3-219ENST00000636466 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
GABRB3-219ENST00000636466 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
GABRB3-219ENST00000636466 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
GABRB3-219ENST00000636466 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
GABRB3-219ENST00000636466 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.44
GABRB3-219ENST00000636466 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
GABRB3-219ENST00000636466 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
GABRB3-219ENST00000636466 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
GABRB3-219ENST00000636466 LRP2P98164 4655 aa5.99□□□□□ -1.45
GABRB3-219ENST00000636466 PKD1P98161 4303 aa5.97□□□□□ -1.45
GABRB3-219ENST00000636466 HERC2O95714 4834 aa5.94□□□□□ -1.46
GABRB3-219ENST00000636466 RYR2Q92736 4967 aa5.94□□□□□ -1.46
GABRB3-219ENST00000636466 MT1HP80294 61 aa5.87□□□□□ -1.47
GABRB3-219ENST00000636466 MT2AP02795 61 aa5.81□□□□□ -1.48
GABRB3-219ENST00000636466 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
GABRB3-219ENST00000636466 MT1FP04733 61 aa5.76□□□□□ -1.49
GABRB3-219ENST00000636466 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
GABRB3-219ENST00000636466 HSPG2P98160 4391 aa5.72□□□□□ -1.49
GABRB3-219ENST00000636466 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
GABRB3-219ENST00000636466 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
GABRB3-219ENST00000636466 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
GABRB3-219ENST00000636466 LPAP08519 4548 aa5.64□□□□□ -1.51
GABRB3-219ENST00000636466 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
GABRB3-219ENST00000636466 INE1O15225 51 aa5.6□□□□□ -1.51
GABRB3-219ENST00000636466 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
GABRB3-219ENST00000636466 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
GABRB3-219ENST00000636466 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
GABRB3-219ENST00000636466 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
GABRB3-219ENST00000636466 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
GABRB3-219ENST00000636466 TNXBP22105 4242 aa5.48□□□□□ -1.53
GABRB3-219ENST00000636466 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
GABRB3-219ENST00000636466 HERC1Q15751 4861 aa5.43□□□□□ -1.54
GABRB3-219ENST00000636466 MUC2Q02817 5179 aa5.42□□□□□ -1.54
GABRB3-219ENST00000636466 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
GABRB3-219ENST00000636466 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
GABRB3-219ENST00000636466 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
GABRB3-219ENST00000636466 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
GABRB3-219ENST00000636466 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
GABRB3-219ENST00000636466 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
GABRB3-219ENST00000636466 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
GABRB3-219ENST00000636466 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
GABRB3-219ENST00000636466 MT1BP07438 61 aa5.27□□□□□ -1.57
GABRB3-219ENST00000636466 MT1XP80297 61 aa5.27□□□□□ -1.57
GABRB3-219ENST00000636466 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
GABRB3-219ENST00000636466 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
GABRB3-219ENST00000636466 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
GABRB3-219ENST00000636466 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
GABRB3-219ENST00000636466 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
GABRB3-219ENST00000636466 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
GABRB3-219ENST00000636466 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
GABRB3-219ENST00000636466 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
GABRB3-219ENST00000636466 LCE2BO14633 110 aa5.04□□□□□ -1.6
GABRB3-219ENST00000636466 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
GABRB3-219ENST00000636466 MT1GP13640 62 aa4.99□□□□□ -1.61
GABRB3-219ENST00000636466 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
GABRB3-219ENST00000636466 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
GABRB3-219ENST00000636466 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
GABRB3-219ENST00000636466 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
GABRB3-219ENST00000636466 SPRR2EP22531 72 aa4.9□□□□□ -1.63
GABRB3-219ENST00000636466 SPRR2BP35325 72 aa4.9□□□□□ -1.63
GABRB3-219ENST00000636466 SPRR2AP35326 72 aa4.9□□□□□ -1.63
GABRB3-219ENST00000636466 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
GABRB3-219ENST00000636466 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
GABRB3-219ENST00000636466 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
GABRB3-219ENST00000636466 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms