RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
SCN2A-210ENST00000636135 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
SCN2A-210ENST00000636135 KRTAP19-4Q3LI73 84 aa2.24□□□□□ -2.05
SCN2A-210ENST00000636135 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
SCN2A-210ENST00000636135 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
SCN2A-210ENST00000636135 KMT2AQ03164 3969 aa2.24□□□□□ -2.05
SCN2A-210ENST00000636135 VPS13BQ7Z7G8 4022 aa2.24□□□□□ -2.05
SCN2A-210ENST00000636135 XP32Q5T750 250 aa2.23□□□□□ -2.05
SCN2A-210ENST00000636135 DNAH17Q9UFH2 4485 aa2.2□□□□□ -2.06
SCN2A-210ENST00000636135 DNAH8Q96JB1 4490 aa2.19□□□□□ -2.06
SCN2A-210ENST00000636135 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
SCN2A-210ENST00000636135 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
SCN2A-210ENST00000636135 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
SCN2A-210ENST00000636135 LORP23490 312 aaPredicted RBP2.16□□□□□ -2.06
SCN2A-210ENST00000636135 KRTAP15-1Q3LI76 137 aa2.16□□□□□ -2.06
SCN2A-210ENST00000636135 KRTAP12-2P59991 146 aa2.13□□□□□ -2.07
SCN2A-210ENST00000636135 DNAH9Q9NYC9 4486 aa2.12□□□□□ -2.07
SCN2A-210ENST00000636135 DNAH10Q8IVF4 4471 aa2.1□□□□□ -2.07
SCN2A-210ENST00000636135 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
SCN2A-210ENST00000636135 DYNC1H1Q14204 4646 aaKnown RBP2.09□□□□□ -2.07
SCN2A-210ENST00000636135 KRTAP10-4P60372 401 aaPredicted RBP2.09□□□□□ -2.08
SCN2A-210ENST00000636135 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
SCN2A-210ENST00000636135 KRTAP10-6P60371 365 aaPredicted RBP2.08□□□□□ -2.08
SCN2A-210ENST00000636135 TNXBP22105 4242 aa2.06□□□□□ -2.08
SCN2A-210ENST00000636135 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
SCN2A-210ENST00000636135 PKD1P98161 4303 aa2.06□□□□□ -2.08
SCN2A-210ENST00000636135 LCE2DQ5TA82 110 aaPredicted RBP2.05□□□□□ -2.08
SCN2A-210ENST00000636135 SACSQ9NZJ4 4579 aa2.04□□□□□ -2.08
SCN2A-210ENST00000636135 STARD9Q9P2P6 4700 aa2.01□□□□□ -2.09
SCN2A-210ENST00000636135 KRTAP3-1Q9BYR8 98 aa2□□□□□ -2.09
SCN2A-210ENST00000636135 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
SCN2A-210ENST00000636135 PLECQ15149 4684 aaKnown RBP1.99□□□□□ -2.09
SCN2A-210ENST00000636135 FAT1Q14517 4588 aa1.97□□□□□ -2.09
SCN2A-210ENST00000636135 KRTAP10-12P60413 245 aa1.97□□□□□ -2.09
SCN2A-210ENST00000636135 DNHD1Q96M86 4753 aa1.97□□□□□ -2.09
SCN2A-210ENST00000636135 HSPG2P98160 4391 aa1.97□□□□□ -2.09
SCN2A-210ENST00000636135 KRTAP3-2Q9BYR7 98 aa1.97□□□□□ -2.09
SCN2A-210ENST00000636135 KRTAP4-5Q9BYR2 181 aa1.95□□□□□ -2.1
SCN2A-210ENST00000636135 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
SCN2A-210ENST00000636135 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
SCN2A-210ENST00000636135 KRTAP3-3Q9BYR6 98 aa1.94□□□□□ -2.1
SCN2A-210ENST00000636135 PCLOQ9Y6V0 5065 aa1.93□□□□□ -2.1
SCN2A-210ENST00000636135 MT1HL1P0DM35 61 aa1.92□□□□□ -2.1
SCN2A-210ENST00000636135 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
SCN2A-210ENST00000636135 KRTAP17-1Q9BYP8 105 aa1.91□□□□□ -2.1
SCN2A-210ENST00000636135 MT3P25713 68 aa1.91□□□□□ -2.1
SCN2A-210ENST00000636135 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
SCN2A-210ENST00000636135 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
SCN2A-210ENST00000636135 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
SCN2A-210ENST00000636135 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
SCN2A-210ENST00000636135 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
SCN2A-210ENST00000636135 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
SCN2A-210ENST00000636135 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
SCN2A-210ENST00000636135 SPRR2GQ9BYE4 73 aa1.84□□□□□ -2.12
SCN2A-210ENST00000636135 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
SCN2A-210ENST00000636135 RYR3Q15413 4870 aa1.83□□□□□ -2.12
SCN2A-210ENST00000636135 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
SCN2A-210ENST00000636135 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
SCN2A-210ENST00000636135 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
SCN2A-210ENST00000636135 RYR2Q92736 4967 aa1.77□□□□□ -2.13
SCN2A-210ENST00000636135 SPRR2EP22531 72 aa1.75□□□□□ -2.13
SCN2A-210ENST00000636135 SPRR2BP35325 72 aa1.75□□□□□ -2.13
SCN2A-210ENST00000636135 SPRR2AP35326 72 aa1.75□□□□□ -2.13
SCN2A-210ENST00000636135 KMT2CQ8NEZ4 4911 aaKnown RBP1.75□□□□□ -2.13
SCN2A-210ENST00000636135 BIRC6Q9NR09 4857 aa1.72□□□□□ -2.13
SCN2A-210ENST00000636135 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
SCN2A-210ENST00000636135 LCE3CQ5T5A8 94 aa1.71□□□□□ -2.14
SCN2A-210ENST00000636135 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
SCN2A-210ENST00000636135 SPRR2DP22532 72 aa1.67□□□□□ -2.14
SCN2A-210ENST00000636135 KRTAP19-2Q3LHN2 52 aa1.67□□□□□ -2.14
SCN2A-210ENST00000636135 LCE3BQ5TA77 95 aa1.67□□□□□ -2.14
SCN2A-210ENST00000636135 MT4P47944 62 aa1.65□□□□□ -2.15
SCN2A-210ENST00000636135 LCE2BO14633 110 aa1.65□□□□□ -2.15
SCN2A-210ENST00000636135 HERC2O95714 4834 aa1.63□□□□□ -2.15
SCN2A-210ENST00000636135 ABCA13Q86UQ4 5058 aa1.62□□□□□ -2.15
SCN2A-210ENST00000636135 MT1HP80294 61 aa1.62□□□□□ -2.15
SCN2A-210ENST00000636135 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
SCN2A-210ENST00000636135 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
SCN2A-210ENST00000636135 HERC1Q15751 4861 aa1.59□□□□□ -2.15
SCN2A-210ENST00000636135 MT2AP02795 61 aa1.59□□□□□ -2.16
SCN2A-210ENST00000636135 MT1GP13640 62 aa1.59□□□□□ -2.16
SCN2A-210ENST00000636135 LCE2AQ5TA79 106 aaPredicted RBP1.58□□□□□ -2.16
SCN2A-210ENST00000636135 KRTAP19-1Q8IUB9 90 aa1.58□□□□□ -2.16
SCN2A-210ENST00000636135 LCE2CQ5TA81 110 aa1.57□□□□□ -2.16
SCN2A-210ENST00000636135 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
SCN2A-210ENST00000636135 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
SCN2A-210ENST00000636135 MT1LQ93083 61 aa1.56□□□□□ -2.16
SCN2A-210ENST00000636135 UBR4Q5T4S7 5183 aa1.55□□□□□ -2.16
SCN2A-210ENST00000636135 KIAA1109Q2LD37 5005 aa1.54□□□□□ -2.16
SCN2A-210ENST00000636135 KRTAP9-8Q9BYQ0 159 aa1.54□□□□□ -2.16
SCN2A-210ENST00000636135 MT1XP80297 61 aa1.53□□□□□ -2.16
SCN2A-210ENST00000636135 MT1FP04733 61 aa1.53□□□□□ -2.17
SCN2A-210ENST00000636135 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
SCN2A-210ENST00000636135 KRTAP9-3Q9BYQ3 159 aa1.51□□□□□ -2.17
SCN2A-210ENST00000636135 LRP2P98164 4655 aa1.5□□□□□ -2.17
SCN2A-210ENST00000636135 KRTAP4-8A0A0G2JLE6 195 aa1.5□□□□□ -2.17
SCN2A-210ENST00000636135 KRTAP4-8Q9BYQ9 185 aa1.5□□□□□ -2.17
SCN2A-210ENST00000636135 LCE1DQ5T752 114 aa1.5□□□□□ -2.17
SCN2A-210ENST00000636135 MT1BP07438 61 aa1.5□□□□□ -2.17
SCN2A-210ENST00000636135 MT1EP04732 61 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms