RNA–Protein interactions for RNA: ENST00000635953.1

LGI1-217, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,430 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-217ENST00000635953 PTPN13Q12923 2485 aa1.45□□□□□ -2.18
LGI1-217ENST00000635953 HECTD1Q9ULT8 2610 aa1.45□□□□□ -2.18
LGI1-217ENST00000635953 MAST4O15021 2626 aa1.44□□□□□ -2.18
LGI1-217ENST00000635953 TEX15Q9BXT5 2789 aa1.44□□□□□ -2.18
LGI1-217ENST00000635953 SPTAN1Q13813 2472 aaKnown RBP1.44□□□□□ -2.18
LGI1-217ENST00000635953 DNAH8Q96JB1 4490 aa1.44□□□□□ -2.18
LGI1-217ENST00000635953 RPS29P62273 56 aaKnown RBP1.44□□□□□ -2.18
LGI1-217ENST00000635953 USP9XQ93008 2570 aaPredicted RBP1.43□□□□□ -2.18
LGI1-217ENST00000635953 DCHS2Q6V1P9 2916 aa1.43□□□□□ -2.18
LGI1-217ENST00000635953 ZNF292O60281 2723 aa1.43□□□□□ -2.18
LGI1-217ENST00000635953 NIPBLQ6KC79 2804 aaeCLIP1.43□□□□□ -2.18
LGI1-217ENST00000635953 ANK3Q12955 4377 aaKnown RBP1.42□□□□□ -2.18
LGI1-217ENST00000635953 TLN1Q9Y490 2541 aaKnown RBP1.42□□□□□ -2.18
LGI1-217ENST00000635953 HRNRQ86YZ3 2850 aaPredicted RBP1.41□□□□□ -2.18
LGI1-217ENST00000635953 ANK2Q01484 3957 aa1.41□□□□□ -2.18
LGI1-217ENST00000635953 DYNC2H1Q8NCM8 4307 aaKnown RBP1.41□□□□□ -2.18
LGI1-217ENST00000635953 ITPR3Q14573 2671 aa1.4□□□□□ -2.18
LGI1-217ENST00000635953 SONP18583 2426 aaKnown RBP1.4□□□□□ -2.19
LGI1-217ENST00000635953 POLQO75417 2590 aa1.4□□□□□ -2.19
LGI1-217ENST00000635953 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.19
LGI1-217ENST00000635953 DNAH2Q9P225 4427 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 CSMD3Q7Z407 3707 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 TEP1Q99973 2627 aaKnown RBP1.39□□□□□ -2.19
LGI1-217ENST00000635953 CMYA5Q8N3K9 4069 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
LGI1-217ENST00000635953 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 TLN2Q9Y4G6 2542 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 FBN3Q75N90 2809 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 UTP20O75691 2785 aaKnown RBP1.39□□□□□ -2.19
LGI1-217ENST00000635953 TENM4Q6N022 2769 aa1.39□□□□□ -2.19
LGI1-217ENST00000635953 GCN1Q92616 2671 aaKnown RBP1.38□□□□□ -2.19
LGI1-217ENST00000635953 LYSTQ99698 3801 aa1.38□□□□□ -2.19
LGI1-217ENST00000635953 DNAH6Q9C0G6 4158 aa1.38□□□□□ -2.19
LGI1-217ENST00000635953 MTORP42345 2549 aa1.38□□□□□ -2.19
LGI1-217ENST00000635953 COL7A1Q02388 2944 aa1.38□□□□□ -2.19
LGI1-217ENST00000635953 DMBT1Q9UGM3 2413 aaPredicted RBP1.37□□□□□ -2.19
LGI1-217ENST00000635953 DNAH17Q9UFH2 4485 aa1.37□□□□□ -2.19
LGI1-217ENST00000635953 PRKDCP78527 4128 aaKnown RBP1.37□□□□□ -2.19
LGI1-217ENST00000635953 DNAH10Q8IVF4 4471 aa1.37□□□□□ -2.19
LGI1-217ENST00000635953 DNAH9Q9NYC9 4486 aa1.37□□□□□ -2.19
LGI1-217ENST00000635953 CFAP46Q8IYW2 2715 aa1.37□□□□□ -2.19
LGI1-217ENST00000635953 CENPEQ02224 2701 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 ADGRG4Q8IZF6 3080 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 HUWE1Q7Z6Z7 4374 aaKnown RBP1.36□□□□□ -2.19
LGI1-217ENST00000635953 SMR3AQ99954 134 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 SACSQ9NZJ4 4579 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 DOPEY1Q5JWR5 2465 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 TGP01266 2768 aa1.36□□□□□ -2.19
LGI1-217ENST00000635953 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 VPS13CQ709C8 3753 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 USP9YO00507 2555 aaPredicted RBP1.35□□□□□ -2.19
LGI1-217ENST00000635953 CSMD2Q7Z408 3487 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 DNAH7Q8WXX0 4024 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 LRRK2Q5S007 2527 aa1.35□□□□□ -2.19
LGI1-217ENST00000635953 NBEAL1Q6ZS30 2694 aa1.34□□□□□ -2.19
LGI1-217ENST00000635953 PDZD2O15018 2839 aa1.34□□□□□ -2.19
LGI1-217ENST00000635953 TNP1P09430 55 aa1.34□□□□□ -2.19
LGI1-217ENST00000635953 IGSF10Q6WRI0 2623 aa1.34□□□□□ -2.2
LGI1-217ENST00000635953 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
LGI1-217ENST00000635953 NBEAL2Q6ZNJ1 2754 aa1.33□□□□□ -2.2
LGI1-217ENST00000635953 CUBNO60494 3623 aa1.31□□□□□ -2.2
LGI1-217ENST00000635953 MXRA5Q9NR99 2828 aa1.31□□□□□ -2.2
LGI1-217ENST00000635953 HECTD4Q9Y4D8 3996 aa1.31□□□□□ -2.2
LGI1-217ENST00000635953 SVEP1Q4LDE5 3571 aa1.31□□□□□ -2.2
LGI1-217ENST00000635953 FLNCQ14315 2725 aa1.3□□□□□ -2.2
LGI1-217ENST00000635953 VPS13BQ7Z7G8 4022 aa1.3□□□□□ -2.2
LGI1-217ENST00000635953 PKD1P98161 4303 aa1.3□□□□□ -2.2
LGI1-217ENST00000635953 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
LGI1-217ENST00000635953 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
LGI1-217ENST00000635953 FLGP20930 4061 aaPredicted RBP1.29□□□□□ -2.2
LGI1-217ENST00000635953 C9orf92A6NGG3 77 aa1.29□□□□□ -2.2
LGI1-217ENST00000635953 ACANP16112 2415 aa1.29□□□□□ -2.2
LGI1-217ENST00000635953 STAB1Q9NY15 2570 aa1.29□□□□□ -2.2
LGI1-217ENST00000635953 PKHD1L1Q86WI1 4243 aa1.28□□□□□ -2.2
LGI1-217ENST00000635953 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.2
LGI1-217ENST00000635953 ITPR2Q14571 2701 aa1.28□□□□□ -2.2
LGI1-217ENST00000635953 HIVEP1P15822 2718 aa1.28□□□□□ -2.21
LGI1-217ENST00000635953 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
LGI1-217ENST00000635953 ZNF469Q96JG9 3925 aaPredicted RBP1.27□□□□□ -2.21
LGI1-217ENST00000635953 ATRQ13535 2644 aa1.27□□□□□ -2.21
LGI1-217ENST00000635953 FAT3Q8TDW7 4589 aa1.27□□□□□ -2.21
LGI1-217ENST00000635953 NOTCH1P46531 2555 aa1.27□□□□□ -2.21
LGI1-217ENST00000635953 STAB2Q8WWQ8 2551 aa1.26□□□□□ -2.21
LGI1-217ENST00000635953 HSPG2P98160 4391 aa1.26□□□□□ -2.21
LGI1-217ENST00000635953 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
LGI1-217ENST00000635953 FBN2P35556 2912 aa1.25□□□□□ -2.21
LGI1-217ENST00000635953 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
LGI1-217ENST00000635953 ZANQ9Y493 2812 aa1.24□□□□□ -2.21
LGI1-217ENST00000635953 MGAM2Q2M2H8 2515 aa1.23□□□□□ -2.21
LGI1-217ENST00000635953 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
LGI1-217ENST00000635953 KRTAP8-1Q8IUC2 63 aa1.23□□□□□ -2.21
LGI1-217ENST00000635953 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
LGI1-217ENST00000635953 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
LGI1-217ENST00000635953 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
LGI1-217ENST00000635953 FAT2Q9NYQ8 4349 aa1.22□□□□□ -2.21
LGI1-217ENST00000635953 DNHD1Q96M86 4753 aa1.22□□□□□ -2.21
LGI1-217ENST00000635953 PCLOQ9Y6V0 5065 aa1.22□□□□□ -2.21
LGI1-217ENST00000635953 KRTAP10-4P60372 401 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms