RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 COL12A1Q99715 3063 aa0.17□□□□□ -2.38
ATRX-220ENST00000635865 NBEAL2Q6ZNJ1 2754 aa0.17□□□□□ -2.38
ATRX-220ENST00000635865 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
ATRX-220ENST00000635865 DNAH8Q96JB1 4490 aa0.16□□□□□ -2.38
ATRX-220ENST00000635865 RPL39P62891 51 aaKnown RBP0.16□□□□□ -2.38
ATRX-220ENST00000635865 KMT2DO14686 5537 aa0.16□□□□□ -2.38
ATRX-220ENST00000635865 ACACBO00763 2458 aa0.15□□□□□ -2.38
ATRX-220ENST00000635865 RIF1Q5UIP0 2472 aaKnown RBP0.15□□□□□ -2.38
ATRX-220ENST00000635865 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.38
ATRX-220ENST00000635865 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
ATRX-220ENST00000635865 FASNP49327 2511 aaKnown RBP0.15□□□□□ -2.39
ATRX-220ENST00000635865 SPART-AS1P0CW21 52 aa0.15□□□□□ -2.39
ATRX-220ENST00000635865 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
ATRX-220ENST00000635865 FAT1Q14517 4588 aa0.15□□□□□ -2.39
ATRX-220ENST00000635865 SPTBN5Q9NRC6 3674 aaKnown RBP0.15□□□□□ -2.39
ATRX-220ENST00000635865 FAM186AA6NE01 2351 aa0.14□□□□□ -2.39
ATRX-220ENST00000635865 LAMA5O15230 3695 aa0.14□□□□□ -2.39
ATRX-220ENST00000635865 STAB2Q8WWQ8 2551 aa0.13□□□□□ -2.39
ATRX-220ENST00000635865 MXRA5Q9NR99 2828 aa0.13□□□□□ -2.39
ATRX-220ENST00000635865 CELSR3Q9NYQ7 3312 aa0.13□□□□□ -2.39
ATRX-220ENST00000635865 KRTAP8-1Q8IUC2 63 aa0.13□□□□□ -2.39
ATRX-220ENST00000635865 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
ATRX-220ENST00000635865 CRYBG3Q68DQ2 2970 aa0.12□□□□□ -2.39
ATRX-220ENST00000635865 CHD7Q9P2D1 2997 aa0.12□□□□□ -2.39
ATRX-220ENST00000635865 TOMM7Q9P0U1 55 aa0.12□□□□□ -2.39
ATRX-220ENST00000635865 DNAH10Q8IVF4 4471 aa0.11□□□□□ -2.39
ATRX-220ENST00000635865 MYO18BQ8IUG5 2567 aa0.11□□□□□ -2.39
ATRX-220ENST00000635865 RPL39LQ96EH5 51 aaKnown RBP0.11□□□□□ -2.39
ATRX-220ENST00000635865 LAMA1P25391 3075 aa0.11□□□□□ -2.39
ATRX-220ENST00000635865 ITPR1Q14643 2758 aa0.1□□□□□ -2.39
ATRX-220ENST00000635865 USP9YO00507 2555 aaPredicted RBP0.1□□□□□ -2.39
ATRX-220ENST00000635865 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
ATRX-220ENST00000635865 TLN2Q9Y4G6 2542 aa0.1□□□□□ -2.39
ATRX-220ENST00000635865 CCDC168Q8NDH2 2452 aa0.08□□□□□ -2.4
ATRX-220ENST00000635865 ZFHX4Q86UP3 3567 aa0.08□□□□□ -2.4
ATRX-220ENST00000635865 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
ATRX-220ENST00000635865 ITPR3Q14573 2671 aa0.08□□□□□ -2.4
ATRX-220ENST00000635865 KRTAP19-5Q3LI72 72 aa0.07□□□□□ -2.4
ATRX-220ENST00000635865 RELNP78509 3460 aa0.07□□□□□ -2.4
ATRX-220ENST00000635865 DEFB1P60022 68 aa0.06□□□□□ -2.4
ATRX-220ENST00000635865 LEAP2Q969E1 77 aa0.06□□□□□ -2.4
ATRX-220ENST00000635865 PLECQ15149 4684 aaKnown RBP0.06□□□□□ -2.4
ATRX-220ENST00000635865 USP9XQ93008 2570 aaPredicted RBP0.05□□□□□ -2.4
ATRX-220ENST00000635865 DYNC1H1Q14204 4646 aaKnown RBP0.05□□□□□ -2.4
ATRX-220ENST00000635865 SMR3BP02814 79 aaPredicted RBP0.05□□□□□ -2.4
ATRX-220ENST00000635865 LINC01590Q5TEZ4 76 aa0.05□□□□□ -2.4
ATRX-220ENST00000635865 MGAQ8IWI9 3026 aa0.05□□□□□ -2.4
ATRX-220ENST00000635865 MUC17Q685J3 4493 aa0.05□□□□□ -2.4
ATRX-220ENST00000635865 PCLOQ9Y6V0 5065 aa0.04□□□□□ -2.4
ATRX-220ENST00000635865 CSMD1Q96PZ7 3565 aa0.03□□□□□ -2.4
ATRX-220ENST00000635865 MUC2Q02817 5179 aa0.03□□□□□ -2.4
ATRX-220ENST00000635865 HERC1Q15751 4861 aa0.03□□□□□ -2.4
ATRX-220ENST00000635865 STARD9Q9P2P6 4700 aa0.03□□□□□ -2.4
ATRX-220ENST00000635865 TRRAPQ9Y4A5 3859 aa0.03□□□□□ -2.4
ATRX-220ENST00000635865 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.41
ATRX-220ENST00000635865 C5orf42Q9H799 3197 aa0.02□□□□□ -2.41
ATRX-220ENST00000635865 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
ATRX-220ENST00000635865 DNAH17Q9UFH2 4485 aa0.02□□□□□ -2.41
ATRX-220ENST00000635865 ADGRG4Q8IZF6 3080 aa0.02□□□□□ -2.41
ATRX-220ENST00000635865 LAMA3Q16787 3333 aa0.01□□□□□ -2.41
ATRX-220ENST00000635865 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
ATRX-220ENST00000635865 DMXL2Q8TDJ6 3036 aa0□□□□□ -2.41
ATRX-220ENST00000635865 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
ATRX-220ENST00000635865 ARHGAP5-AS1Q96IT6 56 aa0□□□□□ -2.41
ATRX-220ENST00000635865 MT1HP80294 61 aa-0.01□□□□□ -2.41
ATRX-220ENST00000635865 SPTAN1Q13813 2472 aaKnown RBP-0.02□□□□□ -2.41
ATRX-220ENST00000635865 CFAP54Q96N23 3096 aa-0.02□□□□□ -2.41
ATRX-220ENST00000635865 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
ATRX-220ENST00000635865 UBR4Q5T4S7 5183 aa-0.04□□□□□ -2.42
ATRX-220ENST00000635865 DNAH5Q8TE73 4624 aa-0.05□□□□□ -2.42
ATRX-220ENST00000635865 DEFB136Q30KP8 78 aa-0.05□□□□□ -2.42
ATRX-220ENST00000635865 MUC12Q9UKN1 5478 aa-0.05□□□□□ -2.42
ATRX-220ENST00000635865 SMG1Q96Q15 3661 aaKnown RBP-0.06□□□□□ -2.42
ATRX-220ENST00000635865 PRCDQ00LT1 54 aa-0.06□□□□□ -2.42
ATRX-220ENST00000635865 RHPN1-AS1Q9BWJ2 59 aa-0.06□□□□□ -2.42
ATRX-220ENST00000635865 SRCAPQ6ZRS2 3230 aa-0.06□□□□□ -2.42
ATRX-220ENST00000635865 DNHD1Q96M86 4753 aa-0.06□□□□□ -2.42
ATRX-220ENST00000635865 TEX15Q9BXT5 2789 aa-0.06□□□□□ -2.42
ATRX-220ENST00000635865 DEFB104AQ8WTQ1 72 aa-0.07□□□□□ -2.42
ATRX-220ENST00000635865 LRBAP50851 2863 aa-0.07□□□□□ -2.42
ATRX-220ENST00000635865 USH2AO75445 5202 aa-0.07□□□□□ -2.42
ATRX-220ENST00000635865 MT1EP04732 61 aa-0.08□□□□□ -2.42
ATRX-220ENST00000635865 NIPBLQ6KC79 2804 aaeCLIP-0.09□□□□□ -2.42
ATRX-220ENST00000635865 RYR1P21817 5038 aa-0.1□□□□□ -2.42
ATRX-220ENST00000635865 DOPEY1Q5JWR5 2465 aa-0.1□□□□□ -2.43
ATRX-220ENST00000635865 ATMQ13315 3056 aa-0.1□□□□□ -2.43
ATRX-220ENST00000635865 CFAP46Q8IYW2 2715 aa-0.11□□□□□ -2.43
ATRX-220ENST00000635865 K7EIM0 57 aa-0.11□□□□□ -2.43
ATRX-220ENST00000635865 TTTY10Q9BZA0 68 aa-0.11□□□□□ -2.43
ATRX-220ENST00000635865 PRUNE2Q8WUY3 3088 aa-0.11□□□□□ -2.43
ATRX-220ENST00000635865 LAMA2P24043 3122 aaKnown RBP-0.11□□□□□ -2.43
ATRX-220ENST00000635865 VPS13CQ709C8 3753 aa-0.11□□□□□ -2.43
ATRX-220ENST00000635865 CEP250Q9BV73 2442 aa-0.12□□□□□ -2.43
ATRX-220ENST00000635865 FRYLO94915 3013 aa-0.12□□□□□ -2.43
ATRX-220ENST00000635865 MT1LQ93083 61 aa-0.12□□□□□ -2.43
ATRX-220ENST00000635865 CSMD2Q7Z408 3487 aa-0.12□□□□□ -2.43
ATRX-220ENST00000635865 MT1XP80297 61 aa-0.13□□□□□ -2.43
ATRX-220ENST00000635865 MYO9AB2RTY4 2548 aa-0.13□□□□□ -2.43
ATRX-220ENST00000635865 EYSQ5T1H1 3165 aa-0.13□□□□□ -2.43
ATRX-220ENST00000635865 GPR98Q8WXG9 6306 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms