RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
GABRB3-217ENST00000635832 LCE2BO14633 110 aa3.52□□□□□ -1.85
GABRB3-217ENST00000635832 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
GABRB3-217ENST00000635832 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
GABRB3-217ENST00000635832 LOC400499M0QZD8 3231 aa3.5□□□□□ -1.85
GABRB3-217ENST00000635832 WDFY3Q8IZQ1 3526 aa3.5□□□□□ -1.85
GABRB3-217ENST00000635832 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
GABRB3-217ENST00000635832 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
GABRB3-217ENST00000635832 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
GABRB3-217ENST00000635832 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
GABRB3-217ENST00000635832 DNAH5Q8TE73 4624 aa3.47□□□□□ -1.85
GABRB3-217ENST00000635832 MYO15AQ9UKN7 3530 aa3.46□□□□□ -1.85
GABRB3-217ENST00000635832 DNAH10Q8IVF4 4471 aa3.46□□□□□ -1.86
GABRB3-217ENST00000635832 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
GABRB3-217ENST00000635832 SPTBN5Q9NRC6 3674 aaKnown RBP3.42□□□□□ -1.86
GABRB3-217ENST00000635832 MT1GP13640 62 aa3.4□□□□□ -1.87
GABRB3-217ENST00000635832 FAT1Q14517 4588 aa3.39□□□□□ -1.87
GABRB3-217ENST00000635832 RELNP78509 3460 aa3.38□□□□□ -1.87
GABRB3-217ENST00000635832 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
GABRB3-217ENST00000635832 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
GABRB3-217ENST00000635832 TRRAPQ9Y4A5 3859 aa3.33□□□□□ -1.88
GABRB3-217ENST00000635832 MT1XP80297 61 aa3.33□□□□□ -1.88
GABRB3-217ENST00000635832 DNAH9Q9NYC9 4486 aa3.32□□□□□ -1.88
GABRB3-217ENST00000635832 LCE2CQ5TA81 110 aa3.32□□□□□ -1.88
GABRB3-217ENST00000635832 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
GABRB3-217ENST00000635832 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
GABRB3-217ENST00000635832 CUBNO60494 3623 aa3.29□□□□□ -1.88
GABRB3-217ENST00000635832 HERC1Q15751 4861 aa3.29□□□□□ -1.88
GABRB3-217ENST00000635832 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
GABRB3-217ENST00000635832 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
GABRB3-217ENST00000635832 MT1BP07438 61 aa3.27□□□□□ -1.89
GABRB3-217ENST00000635832 BSNQ9UPA5 3926 aa3.27□□□□□ -1.89
GABRB3-217ENST00000635832 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
GABRB3-217ENST00000635832 SPENQ96T58 3664 aaKnown RBP3.23□□□□□ -1.89
GABRB3-217ENST00000635832 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
GABRB3-217ENST00000635832 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
GABRB3-217ENST00000635832 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
GABRB3-217ENST00000635832 MUC3AQ02505 3323 aa3.21□□□□□ -1.9
GABRB3-217ENST00000635832 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
GABRB3-217ENST00000635832 RYR1P21817 5038 aa3.2□□□□□ -1.9
GABRB3-217ENST00000635832 SACSQ9NZJ4 4579 aa3.2□□□□□ -1.9
GABRB3-217ENST00000635832 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
GABRB3-217ENST00000635832 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
GABRB3-217ENST00000635832 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
GABRB3-217ENST00000635832 FAT2Q9NYQ8 4349 aa3.18□□□□□ -1.9
GABRB3-217ENST00000635832 APOBP04114 4563 aaKnown RBP3.16□□□□□ -1.9
GABRB3-217ENST00000635832 LRP1BQ9NZR2 4599 aa3.15□□□□□ -1.91
GABRB3-217ENST00000635832 MT3P25713 68 aa3.15□□□□□ -1.91
GABRB3-217ENST00000635832 MT1LQ93083 61 aa3.14□□□□□ -1.91
GABRB3-217ENST00000635832 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
GABRB3-217ENST00000635832 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
GABRB3-217ENST00000635832 DMDP11532 3685 aa3.13□□□□□ -1.91
GABRB3-217ENST00000635832 DNAH8Q96JB1 4490 aa3.11□□□□□ -1.91
GABRB3-217ENST00000635832 DYNC2H1Q8NCM8 4307 aaKnown RBP3.11□□□□□ -1.91
GABRB3-217ENST00000635832 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
GABRB3-217ENST00000635832 HSPG2P98160 4391 aa3.1□□□□□ -1.91
GABRB3-217ENST00000635832 MT4P47944 62 aa3.1□□□□□ -1.91
GABRB3-217ENST00000635832 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
GABRB3-217ENST00000635832 CSMD1Q96PZ7 3565 aa3.08□□□□□ -1.92
GABRB3-217ENST00000635832 RYR3Q15413 4870 aa3.07□□□□□ -1.92
GABRB3-217ENST00000635832 MT1EP04732 61 aa3.06□□□□□ -1.92
GABRB3-217ENST00000635832 DNHD1Q96M86 4753 aa3.06□□□□□ -1.92
GABRB3-217ENST00000635832 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
GABRB3-217ENST00000635832 SMG1Q96Q15 3661 aaKnown RBP3.02□□□□□ -1.93
GABRB3-217ENST00000635832 LAMA5O15230 3695 aa3.02□□□□□ -1.93
GABRB3-217ENST00000635832 MT1MQ8N339 61 aa3.01□□□□□ -1.93
GABRB3-217ENST00000635832 LCE1DQ5T752 114 aa3□□□□□ -1.93
GABRB3-217ENST00000635832 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
GABRB3-217ENST00000635832 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
GABRB3-217ENST00000635832 AKAP9Q99996 3911 aa2.98□□□□□ -1.93
GABRB3-217ENST00000635832 DNAH3Q8TD57 4116 aa2.97□□□□□ -1.93
GABRB3-217ENST00000635832 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
GABRB3-217ENST00000635832 PKD1P98161 4303 aa2.96□□□□□ -1.94
GABRB3-217ENST00000635832 PRM1P04553 51 aa2.94□□□□□ -1.94
GABRB3-217ENST00000635832 RYR2Q92736 4967 aa2.94□□□□□ -1.94
GABRB3-217ENST00000635832 CSMD3Q7Z407 3707 aa2.92□□□□□ -1.94
GABRB3-217ENST00000635832 CMYA5Q8N3K9 4069 aa2.92□□□□□ -1.94
GABRB3-217ENST00000635832 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
GABRB3-217ENST00000635832 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
GABRB3-217ENST00000635832 SVEP1Q4LDE5 3571 aa2.91□□□□□ -1.94
GABRB3-217ENST00000635832 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
GABRB3-217ENST00000635832 HERC2O95714 4834 aa2.91□□□□□ -1.94
GABRB3-217ENST00000635832 PKHD1L1Q86WI1 4243 aa2.89□□□□□ -1.95
GABRB3-217ENST00000635832 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
GABRB3-217ENST00000635832 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
GABRB3-217ENST00000635832 VPS13BQ7Z7G8 4022 aa2.87□□□□□ -1.95
GABRB3-217ENST00000635832 DNAH6Q9C0G6 4158 aa2.87□□□□□ -1.95
GABRB3-217ENST00000635832 DNAH7Q8WXX0 4024 aa2.86□□□□□ -1.95
GABRB3-217ENST00000635832 PRKDCP78527 4128 aaKnown RBP2.86□□□□□ -1.95
GABRB3-217ENST00000635832 MT1AP04731 61 aa2.86□□□□□ -1.95
GABRB3-217ENST00000635832 LRP2P98164 4655 aa2.86□□□□□ -1.95
GABRB3-217ENST00000635832 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
GABRB3-217ENST00000635832 FRAS1Q86XX4 4008 aa2.83□□□□□ -1.96
GABRB3-217ENST00000635832 PCLOQ9Y6V0 5065 aa2.82□□□□□ -1.96
GABRB3-217ENST00000635832 VPS13CQ709C8 3753 aa2.82□□□□□ -1.96
GABRB3-217ENST00000635832 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
GABRB3-217ENST00000635832 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
GABRB3-217ENST00000635832 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
GABRB3-217ENST00000635832 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
GABRB3-217ENST00000635832 ANK2Q01484 3957 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms