RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 CRIPTQ9P021 101 aa9.41□□□□□ -0.9
CCNL1-226ENST00000631619 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
CCNL1-226ENST00000631619 TNXBP22105 4242 aa9.4□□□□□ -0.9
CCNL1-226ENST00000631619 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.91
CCNL1-226ENST00000631619 P0C880 135 aa9.33□□□□□ -0.92
CCNL1-226ENST00000631619 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
CCNL1-226ENST00000631619 HSPG2P98160 4391 aa9.31□□□□□ -0.92
CCNL1-226ENST00000631619 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
CCNL1-226ENST00000631619 DMBT1Q9UGM3 2413 aaPredicted RBP9.29□□□□□ -0.92
CCNL1-226ENST00000631619 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
CCNL1-226ENST00000631619 Q5VSD8 79 aa9.25□□□□□ -0.93
CCNL1-226ENST00000631619 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
CCNL1-226ENST00000631619 RYR1P21817 5038 aa9.22□□□□□ -0.93
CCNL1-226ENST00000631619 MYCBP2O75592 4640 aa9.21□□□□□ -0.93
CCNL1-226ENST00000631619 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.93
CCNL1-226ENST00000631619 XP32Q5T750 250 aa9.18□□□□□ -0.94
CCNL1-226ENST00000631619 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
CCNL1-226ENST00000631619 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
CCNL1-226ENST00000631619 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
CCNL1-226ENST00000631619 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
CCNL1-226ENST00000631619 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CCNL1-226ENST00000631619 A0A0D9SG42 100 aa9.11□□□□□ -0.95
CCNL1-226ENST00000631619 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
CCNL1-226ENST00000631619 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
CCNL1-226ENST00000631619 S4R3F8 94 aa9.03□□□□□ -0.96
CCNL1-226ENST00000631619 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
CCNL1-226ENST00000631619 KRTAP15-1Q3LI76 137 aa8.99□□□□□ -0.97
CCNL1-226ENST00000631619 LPAP08519 4548 aa8.93□□□□□ -0.98
CCNL1-226ENST00000631619 NDUFAF8A1L188 74 aa8.92□□□□□ -0.98
CCNL1-226ENST00000631619 LRP2P98164 4655 aa8.9□□□□□ -0.99
CCNL1-226ENST00000631619 KRTAP12-2P59991 146 aa8.9□□□□□ -0.99
CCNL1-226ENST00000631619 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
CCNL1-226ENST00000631619 KRTAP12-1P59990 96 aa8.81□□□□□ -1
CCNL1-226ENST00000631619 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
CCNL1-226ENST00000631619 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
CCNL1-226ENST00000631619 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
CCNL1-226ENST00000631619 HERC2O95714 4834 aa8.67□□□□□ -1.02
CCNL1-226ENST00000631619 M0QZ58 72 aa8.66□□□□□ -1.02
CCNL1-226ENST00000631619 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
CCNL1-226ENST00000631619 PCLOQ9Y6V0 5065 aa8.49□□□□□ -1.05
CCNL1-226ENST00000631619 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
CCNL1-226ENST00000631619 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
CCNL1-226ENST00000631619 J3QL48 77 aa8.42□□□□□ -1.06
CCNL1-226ENST00000631619 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
CCNL1-226ENST00000631619 R4GN34 69 aa8.38□□□□□ -1.07
CCNL1-226ENST00000631619 HERC1Q15751 4861 aa8.34□□□□□ -1.07
CCNL1-226ENST00000631619 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.08
CCNL1-226ENST00000631619 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
CCNL1-226ENST00000631619 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
CCNL1-226ENST00000631619 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
CCNL1-226ENST00000631619 MUC2Q02817 5179 aa8.16□□□□□ -1.1
CCNL1-226ENST00000631619 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.11
CCNL1-226ENST00000631619 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
CCNL1-226ENST00000631619 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
CCNL1-226ENST00000631619 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.13
CCNL1-226ENST00000631619 UBR4Q5T4S7 5183 aa7.9□□□□□ -1.15
CCNL1-226ENST00000631619 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
CCNL1-226ENST00000631619 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
CCNL1-226ENST00000631619 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
CCNL1-226ENST00000631619 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
CCNL1-226ENST00000631619 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
CCNL1-226ENST00000631619 TNP1P09430 55 aa7.74□□□□□ -1.17
CCNL1-226ENST00000631619 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
CCNL1-226ENST00000631619 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
CCNL1-226ENST00000631619 MT1HP80294 61 aa7.55□□□□□ -1.2
CCNL1-226ENST00000631619 M0R2T5 61 aa7.54□□□□□ -1.2
CCNL1-226ENST00000631619 MT1FP04733 61 aa7.45□□□□□ -1.22
CCNL1-226ENST00000631619 MT2AP02795 61 aa7.44□□□□□ -1.22
CCNL1-226ENST00000631619 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
CCNL1-226ENST00000631619 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
CCNL1-226ENST00000631619 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
CCNL1-226ENST00000631619 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
CCNL1-226ENST00000631619 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CCNL1-226ENST00000631619 MT1BP07438 61 aa7.21□□□□□ -1.26
CCNL1-226ENST00000631619 INE1O15225 51 aa7.2□□□□□ -1.26
CCNL1-226ENST00000631619 LCE2BO14633 110 aa7.17□□□□□ -1.26
CCNL1-226ENST00000631619 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
CCNL1-226ENST00000631619 MT1XP80297 61 aa7.15□□□□□ -1.26
CCNL1-226ENST00000631619 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
CCNL1-226ENST00000631619 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
CCNL1-226ENST00000631619 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
CCNL1-226ENST00000631619 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
CCNL1-226ENST00000631619 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
CCNL1-226ENST00000631619 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
CCNL1-226ENST00000631619 USH2AO75445 5202 aa6.78□□□□□ -1.32
CCNL1-226ENST00000631619 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
CCNL1-226ENST00000631619 KMT2DO14686 5537 aa6.62□□□□□ -1.35
CCNL1-226ENST00000631619 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
CCNL1-226ENST00000631619 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
CCNL1-226ENST00000631619 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
CCNL1-226ENST00000631619 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
CCNL1-226ENST00000631619 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
CCNL1-226ENST00000631619 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
CCNL1-226ENST00000631619 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
CCNL1-226ENST00000631619 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
CCNL1-226ENST00000631619 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
CCNL1-226ENST00000631619 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
CCNL1-226ENST00000631619 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CCNL1-226ENST00000631619 MT1EP04732 61 aa6.18□□□□□ -1.42
CCNL1-226ENST00000631619 MT1LQ93083 61 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms