RNA–Protein interactions for RNA: ENST00000630920.1

CCAT2-201, colon cancer associated transcript 2, humanhuman

BASIC

Gene CCAT2, Length 1,752 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAT2-201ENST00000630920 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
CCAT2-201ENST00000630920 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
CCAT2-201ENST00000630920 SETD2Q9BYW2 2564 aaPredicted RBP3.18□□□□□ -1.9
CCAT2-201ENST00000630920 ANK3Q12955 4377 aaKnown RBP3.18□□□□□ -1.9
CCAT2-201ENST00000630920 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
CCAT2-201ENST00000630920 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
CCAT2-201ENST00000630920 JMJD1CQ15652 2540 aa3.17□□□□□ -1.9
CCAT2-201ENST00000630920 CUBNO60494 3623 aa3.16□□□□□ -1.9
CCAT2-201ENST00000630920 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
CCAT2-201ENST00000630920 TRRAPQ9Y4A5 3859 aa3.14□□□□□ -1.91
CCAT2-201ENST00000630920 FRAS1Q86XX4 4008 aa3.14□□□□□ -1.91
CCAT2-201ENST00000630920 KRTAP21-3Q3LHN1 58 aa3.13□□□□□ -1.91
CCAT2-201ENST00000630920 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
CCAT2-201ENST00000630920 NIPBLQ6KC79 2804 aaeCLIP3.13□□□□□ -1.91
CCAT2-201ENST00000630920 ATRQ13535 2644 aa3.12□□□□□ -1.91
CCAT2-201ENST00000630920 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
CCAT2-201ENST00000630920 COL6A5A8TX70 2615 aa3.08□□□□□ -1.92
CCAT2-201ENST00000630920 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
CCAT2-201ENST00000630920 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
CCAT2-201ENST00000630920 STAB1Q9NY15 2570 aa3.07□□□□□ -1.92
CCAT2-201ENST00000630920 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
CCAT2-201ENST00000630920 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
CCAT2-201ENST00000630920 DMBT1Q9UGM3 2413 aaPredicted RBP3.03□□□□□ -1.92
CCAT2-201ENST00000630920 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.93
CCAT2-201ENST00000630920 COL7A1Q02388 2944 aa3.02□□□□□ -1.93
CCAT2-201ENST00000630920 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
CCAT2-201ENST00000630920 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
CCAT2-201ENST00000630920 ANK2Q01484 3957 aa3.02□□□□□ -1.93
CCAT2-201ENST00000630920 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
CCAT2-201ENST00000630920 NBEAL1Q6ZS30 2694 aa3.01□□□□□ -1.93
CCAT2-201ENST00000630920 CMYA5Q8N3K9 4069 aa3□□□□□ -1.93
CCAT2-201ENST00000630920 LYSTQ99698 3801 aa2.99□□□□□ -1.93
CCAT2-201ENST00000630920 TGP01266 2768 aa2.99□□□□□ -1.93
CCAT2-201ENST00000630920 PKD1L1Q8TDX9 2849 aa2.99□□□□□ -1.93
CCAT2-201ENST00000630920 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
CCAT2-201ENST00000630920 M0QZ58 72 aa2.97□□□□□ -1.93
CCAT2-201ENST00000630920 NOTCH1P46531 2555 aa2.97□□□□□ -1.93
CCAT2-201ENST00000630920 DNAH3Q8TD57 4116 aa2.97□□□□□ -1.93
CCAT2-201ENST00000630920 DNAH17Q9UFH2 4485 aa2.97□□□□□ -1.93
CCAT2-201ENST00000630920 MGAM2Q2M2H8 2515 aa2.96□□□□□ -1.94
CCAT2-201ENST00000630920 TENM3Q9P273 2699 aa2.92□□□□□ -1.94
CCAT2-201ENST00000630920 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CCAT2-201ENST00000630920 DNAH9Q9NYC9 4486 aa2.88□□□□□ -1.95
CCAT2-201ENST00000630920 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CCAT2-201ENST00000630920 Q5VSD8 79 aa2.87□□□□□ -1.95
CCAT2-201ENST00000630920 STAB2Q8WWQ8 2551 aa2.86□□□□□ -1.95
CCAT2-201ENST00000630920 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
CCAT2-201ENST00000630920 HUWE1Q7Z6Z7 4374 aaKnown RBP2.85□□□□□ -1.95
CCAT2-201ENST00000630920 C9orf92A6NGG3 77 aa2.84□□□□□ -1.95
CCAT2-201ENST00000630920 KMT2AQ03164 3969 aa2.84□□□□□ -1.95
CCAT2-201ENST00000630920 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
CCAT2-201ENST00000630920 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
CCAT2-201ENST00000630920 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
CCAT2-201ENST00000630920 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
CCAT2-201ENST00000630920 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
CCAT2-201ENST00000630920 DNAH7Q8WXX0 4024 aa2.8□□□□□ -1.96
CCAT2-201ENST00000630920 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
CCAT2-201ENST00000630920 DNAH2Q9P225 4427 aa2.76□□□□□ -1.97
CCAT2-201ENST00000630920 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CCAT2-201ENST00000630920 BIRC6Q9NR09 4857 aa2.73□□□□□ -1.97
CCAT2-201ENST00000630920 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
CCAT2-201ENST00000630920 STARD9Q9P2P6 4700 aa2.73□□□□□ -1.97
CCAT2-201ENST00000630920 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
CCAT2-201ENST00000630920 HECTD4Q9Y4D8 3996 aa2.71□□□□□ -1.97
CCAT2-201ENST00000630920 PLECQ15149 4684 aaKnown RBP2.71□□□□□ -1.98
CCAT2-201ENST00000630920 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
CCAT2-201ENST00000630920 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
CCAT2-201ENST00000630920 RYR3Q15413 4870 aa2.69□□□□□ -1.98
CCAT2-201ENST00000630920 TNP1P09430 55 aa2.66□□□□□ -1.98
CCAT2-201ENST00000630920 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
CCAT2-201ENST00000630920 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
CCAT2-201ENST00000630920 KRTAP10-1P60331 282 aa2.62□□□□□ -1.99
CCAT2-201ENST00000630920 SACSQ9NZJ4 4579 aa2.6□□□□□ -1.99
CCAT2-201ENST00000630920 HYDINQ4G0P3 5121 aa2.59□□□□□ -1.99
CCAT2-201ENST00000630920 PKD1P98161 4303 aa2.58□□□□□ -2
CCAT2-201ENST00000630920 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CCAT2-201ENST00000630920 LRP1Q07954 4544 aaKnown RBP2.57□□□□□ -2
CCAT2-201ENST00000630920 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
CCAT2-201ENST00000630920 PKHD1L1Q86WI1 4243 aa2.56□□□□□ -2
CCAT2-201ENST00000630920 PKHD1P08F94 4074 aa2.55□□□□□ -2
CCAT2-201ENST00000630920 RYR2Q92736 4967 aa2.55□□□□□ -2
CCAT2-201ENST00000630920 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
CCAT2-201ENST00000630920 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
CCAT2-201ENST00000630920 RYR1P21817 5038 aa2.53□□□□□ -2
CCAT2-201ENST00000630920 SMR3BP02814 79 aaPredicted RBP2.52□□□□□ -2.01
CCAT2-201ENST00000630920 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
CCAT2-201ENST00000630920 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
CCAT2-201ENST00000630920 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
CCAT2-201ENST00000630920 KRTAP10-4P60372 401 aaPredicted RBP2.49□□□□□ -2.01
CCAT2-201ENST00000630920 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
CCAT2-201ENST00000630920 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
CCAT2-201ENST00000630920 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
CCAT2-201ENST00000630920 TNXBP22105 4242 aa2.48□□□□□ -2.01
CCAT2-201ENST00000630920 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
CCAT2-201ENST00000630920 HSPG2P98160 4391 aa2.46□□□□□ -2.02
CCAT2-201ENST00000630920 MUC2Q02817 5179 aa2.45□□□□□ -2.02
CCAT2-201ENST00000630920 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
CCAT2-201ENST00000630920 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
CCAT2-201ENST00000630920 HERC2O95714 4834 aa2.39□□□□□ -2.03
CCAT2-201ENST00000630920 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms