RNA–Protein interactions for RNA: ENST00000628769.1

APBA1-203, Transcript of amyloid beta precursor protein binding family A member 1, humanhuman

Gene APBA1, Length 4,850 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA1-203ENST00000628769 COL7A1Q02388 2944 aa3.43□□□□□ -1.86
APBA1-203ENST00000628769 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
APBA1-203ENST00000628769 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
APBA1-203ENST00000628769 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
APBA1-203ENST00000628769 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
APBA1-203ENST00000628769 FRAS1Q86XX4 4008 aa3.39□□□□□ -1.87
APBA1-203ENST00000628769 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
APBA1-203ENST00000628769 LCE2BO14633 110 aa3.39□□□□□ -1.87
APBA1-203ENST00000628769 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
APBA1-203ENST00000628769 MT1HL1P0DM35 61 aa3.37□□□□□ -1.87
APBA1-203ENST00000628769 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
APBA1-203ENST00000628769 KMT2AQ03164 3969 aa3.36□□□□□ -1.87
APBA1-203ENST00000628769 P0C880 135 aa3.36□□□□□ -1.87
APBA1-203ENST00000628769 LYSTQ99698 3801 aa3.36□□□□□ -1.87
APBA1-203ENST00000628769 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
APBA1-203ENST00000628769 PKD1P98161 4303 aa3.35□□□□□ -1.87
APBA1-203ENST00000628769 APOBP04114 4563 aaKnown RBP3.35□□□□□ -1.87
APBA1-203ENST00000628769 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.87
APBA1-203ENST00000628769 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
APBA1-203ENST00000628769 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
APBA1-203ENST00000628769 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
APBA1-203ENST00000628769 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
APBA1-203ENST00000628769 VPS13BQ7Z7G8 4022 aa3.31□□□□□ -1.88
APBA1-203ENST00000628769 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
APBA1-203ENST00000628769 FAT1Q14517 4588 aa3.27□□□□□ -1.89
APBA1-203ENST00000628769 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
APBA1-203ENST00000628769 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
APBA1-203ENST00000628769 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
APBA1-203ENST00000628769 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
APBA1-203ENST00000628769 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.89
APBA1-203ENST00000628769 TNXBP22105 4242 aa3.21□□□□□ -1.9
APBA1-203ENST00000628769 DNHD1Q96M86 4753 aa3.21□□□□□ -1.9
APBA1-203ENST00000628769 TNP1P09430 55 aa3.2□□□□□ -1.9
APBA1-203ENST00000628769 RYR2Q92736 4967 aa3.2□□□□□ -1.9
APBA1-203ENST00000628769 LORP23490 312 aaPredicted RBP3.19□□□□□ -1.9
APBA1-203ENST00000628769 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
APBA1-203ENST00000628769 HSPG2P98160 4391 aa3.17□□□□□ -1.9
APBA1-203ENST00000628769 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
APBA1-203ENST00000628769 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
APBA1-203ENST00000628769 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
APBA1-203ENST00000628769 RYR1P21817 5038 aa3.12□□□□□ -1.91
APBA1-203ENST00000628769 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
APBA1-203ENST00000628769 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
APBA1-203ENST00000628769 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
APBA1-203ENST00000628769 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
APBA1-203ENST00000628769 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
APBA1-203ENST00000628769 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
APBA1-203ENST00000628769 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
APBA1-203ENST00000628769 RYR3Q15413 4870 aa2.99□□□□□ -1.93
APBA1-203ENST00000628769 HERC1Q15751 4861 aa2.94□□□□□ -1.94
APBA1-203ENST00000628769 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
APBA1-203ENST00000628769 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
APBA1-203ENST00000628769 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
APBA1-203ENST00000628769 MT1HP80294 61 aa2.86□□□□□ -1.95
APBA1-203ENST00000628769 KMT2CQ8NEZ4 4911 aaKnown RBP2.85□□□□□ -1.95
APBA1-203ENST00000628769 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
APBA1-203ENST00000628769 MT2AP02795 61 aa2.81□□□□□ -1.96
APBA1-203ENST00000628769 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
APBA1-203ENST00000628769 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
APBA1-203ENST00000628769 LRP2P98164 4655 aa2.8□□□□□ -1.96
APBA1-203ENST00000628769 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
APBA1-203ENST00000628769 FLGP20930 4061 aaPredicted RBP2.79□□□□□ -1.96
APBA1-203ENST00000628769 HERC2O95714 4834 aa2.78□□□□□ -1.97
APBA1-203ENST00000628769 KRTAP19-1Q8IUB9 90 aa2.77□□□□□ -1.97
APBA1-203ENST00000628769 MT1FP04733 61 aa2.77□□□□□ -1.97
APBA1-203ENST00000628769 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
APBA1-203ENST00000628769 LPAP08519 4548 aa2.75□□□□□ -1.97
APBA1-203ENST00000628769 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
APBA1-203ENST00000628769 INE1O15225 51 aa2.75□□□□□ -1.97
APBA1-203ENST00000628769 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
APBA1-203ENST00000628769 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
APBA1-203ENST00000628769 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
APBA1-203ENST00000628769 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
APBA1-203ENST00000628769 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
APBA1-203ENST00000628769 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
APBA1-203ENST00000628769 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
APBA1-203ENST00000628769 MT1BP07438 61 aa2.67□□□□□ -1.98
APBA1-203ENST00000628769 MT1XP80297 61 aa2.65□□□□□ -1.98
APBA1-203ENST00000628769 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
APBA1-203ENST00000628769 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
APBA1-203ENST00000628769 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
APBA1-203ENST00000628769 PCLOQ9Y6V0 5065 aa2.58□□□□□ -2
APBA1-203ENST00000628769 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
APBA1-203ENST00000628769 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
APBA1-203ENST00000628769 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
APBA1-203ENST00000628769 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
APBA1-203ENST00000628769 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
APBA1-203ENST00000628769 LCE5AQ5TCM9 118 aa2.46□□□□□ -2.02
APBA1-203ENST00000628769 KRTAP9-7A8MTY7 169 aa2.45□□□□□ -2.02
APBA1-203ENST00000628769 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 SPRR2EP22531 72 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 SPRR2BP35325 72 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 SPRR2AP35326 72 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
APBA1-203ENST00000628769 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
APBA1-203ENST00000628769 SPRR2DP22532 72 aa2.42□□□□□ -2.02
APBA1-203ENST00000628769 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
APBA1-203ENST00000628769 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
APBA1-203ENST00000628769 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms