RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SPRR2EP22531 72 aa4.45□□□□□ -1.7
VPS8-227ENST00000625842 SPRR2BP35325 72 aa4.45□□□□□ -1.7
VPS8-227ENST00000625842 SPRR2AP35326 72 aa4.45□□□□□ -1.7
VPS8-227ENST00000625842 NBPF19A0A087WUL8 3843 aa4.4□□□□□ -1.71
VPS8-227ENST00000625842 BSNQ9UPA5 3926 aa4.4□□□□□ -1.71
VPS8-227ENST00000625842 SPRR2DP22532 72 aa4.35□□□□□ -1.71
VPS8-227ENST00000625842 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
VPS8-227ENST00000625842 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
VPS8-227ENST00000625842 PLECQ15149 4684 aaKnown RBP4.34□□□□□ -1.71
VPS8-227ENST00000625842 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.71
VPS8-227ENST00000625842 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.72
VPS8-227ENST00000625842 MT1FP04733 61 aa4.33□□□□□ -1.72
VPS8-227ENST00000625842 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
VPS8-227ENST00000625842 SMG1Q96Q15 3661 aaKnown RBP4.29□□□□□ -1.72
VPS8-227ENST00000625842 LCE2BO14633 110 aa4.29□□□□□ -1.72
VPS8-227ENST00000625842 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
VPS8-227ENST00000625842 CSMD1Q96PZ7 3565 aa4.26□□□□□ -1.73
VPS8-227ENST00000625842 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
VPS8-227ENST00000625842 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
VPS8-227ENST00000625842 SVEP1Q4LDE5 3571 aa4.2□□□□□ -1.74
VPS8-227ENST00000625842 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
VPS8-227ENST00000625842 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
VPS8-227ENST00000625842 DNAH9Q9NYC9 4486 aa4.13□□□□□ -1.75
VPS8-227ENST00000625842 TRRAPQ9Y4A5 3859 aa4.11□□□□□ -1.75
VPS8-227ENST00000625842 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
VPS8-227ENST00000625842 DNAH2Q9P225 4427 aa4.1□□□□□ -1.75
VPS8-227ENST00000625842 DNHD1Q96M86 4753 aa4.1□□□□□ -1.75
VPS8-227ENST00000625842 MT1GP13640 62 aa4.09□□□□□ -1.75
VPS8-227ENST00000625842 HERC1Q15751 4861 aa4.09□□□□□ -1.75
VPS8-227ENST00000625842 FAT1Q14517 4588 aa4.06□□□□□ -1.76
VPS8-227ENST00000625842 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
VPS8-227ENST00000625842 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
VPS8-227ENST00000625842 RYR1P21817 5038 aa4.06□□□□□ -1.76
VPS8-227ENST00000625842 KRTAP17-1Q9BYP8 105 aa4.05□□□□□ -1.76
VPS8-227ENST00000625842 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
VPS8-227ENST00000625842 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
VPS8-227ENST00000625842 CUBNO60494 3623 aa4.03□□□□□ -1.76
VPS8-227ENST00000625842 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
VPS8-227ENST00000625842 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
VPS8-227ENST00000625842 AKAP9Q99996 3911 aa4.01□□□□□ -1.77
VPS8-227ENST00000625842 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
VPS8-227ENST00000625842 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
VPS8-227ENST00000625842 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
VPS8-227ENST00000625842 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
VPS8-227ENST00000625842 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
VPS8-227ENST00000625842 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
VPS8-227ENST00000625842 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
VPS8-227ENST00000625842 DNAH17Q9UFH2 4485 aa3.91□□□□□ -1.78
VPS8-227ENST00000625842 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
VPS8-227ENST00000625842 HERC2O95714 4834 aa3.9□□□□□ -1.78
VPS8-227ENST00000625842 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.78
VPS8-227ENST00000625842 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
VPS8-227ENST00000625842 RYR3Q15413 4870 aa3.88□□□□□ -1.79
VPS8-227ENST00000625842 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
VPS8-227ENST00000625842 MT1BP07438 61 aa3.86□□□□□ -1.79
VPS8-227ENST00000625842 FAT2Q9NYQ8 4349 aa3.86□□□□□ -1.79
VPS8-227ENST00000625842 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
VPS8-227ENST00000625842 MT1XP80297 61 aa3.84□□□□□ -1.79
VPS8-227ENST00000625842 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.8
VPS8-227ENST00000625842 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.8
VPS8-227ENST00000625842 DYNC2H1Q8NCM8 4307 aaKnown RBP3.83□□□□□ -1.8
VPS8-227ENST00000625842 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
VPS8-227ENST00000625842 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
VPS8-227ENST00000625842 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
VPS8-227ENST00000625842 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
VPS8-227ENST00000625842 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
VPS8-227ENST00000625842 RYR2Q92736 4967 aa3.78□□□□□ -1.8
VPS8-227ENST00000625842 HSPG2P98160 4391 aa3.77□□□□□ -1.81
VPS8-227ENST00000625842 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
VPS8-227ENST00000625842 CSMD3Q7Z407 3707 aa3.74□□□□□ -1.81
VPS8-227ENST00000625842 MT3P25713 68 aa3.73□□□□□ -1.81
VPS8-227ENST00000625842 KIAA1109Q2LD37 5005 aa3.73□□□□□ -1.81
VPS8-227ENST00000625842 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
VPS8-227ENST00000625842 DNAH6Q9C0G6 4158 aa3.71□□□□□ -1.82
VPS8-227ENST00000625842 MT4P47944 62 aa3.7□□□□□ -1.82
VPS8-227ENST00000625842 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
VPS8-227ENST00000625842 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
VPS8-227ENST00000625842 MT1LQ93083 61 aa3.69□□□□□ -1.82
VPS8-227ENST00000625842 ANK2Q01484 3957 aa3.67□□□□□ -1.82
VPS8-227ENST00000625842 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
VPS8-227ENST00000625842 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
VPS8-227ENST00000625842 LRP2P98164 4655 aa3.66□□□□□ -1.82
VPS8-227ENST00000625842 STARD9Q9P2P6 4700 aa3.65□□□□□ -1.82
VPS8-227ENST00000625842 PKD1P98161 4303 aa3.64□□□□□ -1.83
VPS8-227ENST00000625842 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
VPS8-227ENST00000625842 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
VPS8-227ENST00000625842 DNAH3Q8TD57 4116 aa3.63□□□□□ -1.83
VPS8-227ENST00000625842 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
VPS8-227ENST00000625842 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
VPS8-227ENST00000625842 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
VPS8-227ENST00000625842 MT1EP04732 61 aa3.59□□□□□ -1.84
VPS8-227ENST00000625842 PRKDCP78527 4128 aaKnown RBP3.57□□□□□ -1.84
VPS8-227ENST00000625842 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
VPS8-227ENST00000625842 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
VPS8-227ENST00000625842 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
VPS8-227ENST00000625842 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
VPS8-227ENST00000625842 MT1MQ8N339 61 aa3.53□□□□□ -1.84
VPS8-227ENST00000625842 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
VPS8-227ENST00000625842 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
VPS8-227ENST00000625842 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms