RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 ZFYVE26Q68DK2 2539 aa2.09□□□□□ -2.08
CHD2-204ENST00000625463 VPS13BQ7Z7G8 4022 aa2.08□□□□□ -2.08
CHD2-204ENST00000625463 NBEAL2Q6ZNJ1 2754 aa2.08□□□□□ -2.08
CHD2-204ENST00000625463 ABCA12Q86UK0 2595 aa2.08□□□□□ -2.08
CHD2-204ENST00000625463 PDZD2O15018 2839 aa2.08□□□□□ -2.08
CHD2-204ENST00000625463 HELZ2Q9BYK8 2649 aaKnown RBP2.07□□□□□ -2.08
CHD2-204ENST00000625463 UNC79Q9P2D8 2635 aa2.07□□□□□ -2.08
CHD2-204ENST00000625463 KRTAP10-1P60331 282 aa2.07□□□□□ -2.08
CHD2-204ENST00000625463 USP9YO00507 2555 aaPredicted RBP2.07□□□□□ -2.08
CHD2-204ENST00000625463 DNAH17Q9UFH2 4485 aa2.07□□□□□ -2.08
CHD2-204ENST00000625463 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
CHD2-204ENST00000625463 ACANP16112 2415 aa2.05□□□□□ -2.08
CHD2-204ENST00000625463 ADGRG4Q8IZF6 3080 aa2.05□□□□□ -2.08
CHD2-204ENST00000625463 CUBNO60494 3623 aa2.05□□□□□ -2.08
CHD2-204ENST00000625463 NBEAL1Q6ZS30 2694 aa2.04□□□□□ -2.08
CHD2-204ENST00000625463 SVEP1Q4LDE5 3571 aa2.04□□□□□ -2.08
CHD2-204ENST00000625463 EPG5Q9HCE0 2579 aa2.04□□□□□ -2.08
CHD2-204ENST00000625463 KMT2AQ03164 3969 aa2.03□□□□□ -2.08
CHD2-204ENST00000625463 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
CHD2-204ENST00000625463 BDP1A6H8Y1 2624 aa2.02□□□□□ -2.09
CHD2-204ENST00000625463 ANKRD11Q6UB99 2663 aaPredicted RBP2.01□□□□□ -2.09
CHD2-204ENST00000625463 USP24Q9UPU5 2620 aa2.01□□□□□ -2.09
CHD2-204ENST00000625463 CEP295Q9C0D2 2601 aa2□□□□□ -2.09
CHD2-204ENST00000625463 KRTAP10-5P60370 271 aa2□□□□□ -2.09
CHD2-204ENST00000625463 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
CHD2-204ENST00000625463 CSMD2Q7Z408 3487 aa2□□□□□ -2.09
CHD2-204ENST00000625463 PKD1P98161 4303 aa2□□□□□ -2.09
CHD2-204ENST00000625463 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
CHD2-204ENST00000625463 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
CHD2-204ENST00000625463 FLNBO75369 2602 aaKnown RBP1.99□□□□□ -2.09
CHD2-204ENST00000625463 MUC3AQ02505 3323 aa1.99□□□□□ -2.09
CHD2-204ENST00000625463 ZNF469Q96JG9 3925 aaPredicted RBP1.98□□□□□ -2.09
CHD2-204ENST00000625463 FBN3Q75N90 2809 aa1.98□□□□□ -2.09
CHD2-204ENST00000625463 MXRA5Q9NR99 2828 aa1.98□□□□□ -2.09
CHD2-204ENST00000625463 ZNF292O60281 2723 aa1.97□□□□□ -2.09
CHD2-204ENST00000625463 FASNP49327 2511 aaKnown RBP1.97□□□□□ -2.09
CHD2-204ENST00000625463 HIVEP1P15822 2718 aa1.97□□□□□ -2.09
CHD2-204ENST00000625463 PKD1L1Q8TDX9 2849 aa1.96□□□□□ -2.1
CHD2-204ENST00000625463 NOTCH1P46531 2555 aa1.96□□□□□ -2.1
CHD2-204ENST00000625463 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
CHD2-204ENST00000625463 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
CHD2-204ENST00000625463 TEP1Q99973 2627 aaKnown RBP1.96□□□□□ -2.1
CHD2-204ENST00000625463 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
CHD2-204ENST00000625463 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
CHD2-204ENST00000625463 HSPG2P98160 4391 aa1.94□□□□□ -2.1
CHD2-204ENST00000625463 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
CHD2-204ENST00000625463 EYSQ5T1H1 3165 aa1.94□□□□□ -2.1
CHD2-204ENST00000625463 M0R2T5 61 aa1.93□□□□□ -2.1
CHD2-204ENST00000625463 ZANQ9Y493 2812 aa1.93□□□□□ -2.1
CHD2-204ENST00000625463 ACACBO00763 2458 aa1.93□□□□□ -2.1
CHD2-204ENST00000625463 ATRQ13535 2644 aa1.92□□□□□ -2.1
CHD2-204ENST00000625463 POLQO75417 2590 aa1.92□□□□□ -2.1
CHD2-204ENST00000625463 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
CHD2-204ENST00000625463 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
CHD2-204ENST00000625463 MYO18BQ8IUG5 2567 aa1.91□□□□□ -2.1
CHD2-204ENST00000625463 MAST4O15021 2626 aa1.9□□□□□ -2.1
CHD2-204ENST00000625463 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
CHD2-204ENST00000625463 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
CHD2-204ENST00000625463 FLNCQ14315 2725 aa1.89□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
CHD2-204ENST00000625463 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
CHD2-204ENST00000625463 FBN2P35556 2912 aa1.87□□□□□ -2.11
CHD2-204ENST00000625463 PLECQ15149 4684 aaKnown RBP1.87□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CHD2-204ENST00000625463 NOTCH2Q04721 2471 aa1.86□□□□□ -2.11
CHD2-204ENST00000625463 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
CHD2-204ENST00000625463 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
CHD2-204ENST00000625463 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.12
CHD2-204ENST00000625463 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
CHD2-204ENST00000625463 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
CHD2-204ENST00000625463 TNXBP22105 4242 aa1.83□□□□□ -2.12
CHD2-204ENST00000625463 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
CHD2-204ENST00000625463 DYNC1H1Q14204 4646 aaKnown RBP1.82□□□□□ -2.12
CHD2-204ENST00000625463 J3QKU1 62 aa1.81□□□□□ -2.12
CHD2-204ENST00000625463 PKHD1P08F94 4074 aa1.8□□□□□ -2.12
CHD2-204ENST00000625463 STAB1Q9NY15 2570 aa1.79□□□□□ -2.12
CHD2-204ENST00000625463 FLNAP21333 2647 aaKnown RBP1.79□□□□□ -2.12
CHD2-204ENST00000625463 IGSF10Q6WRI0 2623 aa1.79□□□□□ -2.12
CHD2-204ENST00000625463 SMR3BP02814 79 aaPredicted RBP1.78□□□□□ -2.12
CHD2-204ENST00000625463 MGAM2Q2M2H8 2515 aa1.77□□□□□ -2.13
CHD2-204ENST00000625463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CHD2-204ENST00000625463 STARD9Q9P2P6 4700 aa1.73□□□□□ -2.13
CHD2-204ENST00000625463 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
CHD2-204ENST00000625463 LPAP08519 4548 aa1.71□□□□□ -2.14
CHD2-204ENST00000625463 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
CHD2-204ENST00000625463 LRP1BQ9NZR2 4599 aa1.68□□□□□ -2.14
CHD2-204ENST00000625463 FAT1Q14517 4588 aa1.67□□□□□ -2.14
CHD2-204ENST00000625463 HERC1Q15751 4861 aa1.65□□□□□ -2.15
CHD2-204ENST00000625463 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
CHD2-204ENST00000625463 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
CHD2-204ENST00000625463 KRTAP19-5Q3LI72 72 aa1.63□□□□□ -2.15
CHD2-204ENST00000625463 PRM1P04553 51 aa1.6□□□□□ -2.15
CHD2-204ENST00000625463 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
CHD2-204ENST00000625463 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CHD2-204ENST00000625463 MT1AP04731 61 aa1.53□□□□□ -2.16
CHD2-204ENST00000625463 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
CHD2-204ENST00000625463 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms