RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 SPRR2AP35326 72 aa5.11□□□□□ -1.59
SLC6A6-210ENST00000622186 HUWE1Q7Z6Z7 4374 aaKnown RBP5.1□□□□□ -1.59
SLC6A6-210ENST00000622186 PKD1L1Q8TDX9 2849 aa5.05□□□□□ -1.6
SLC6A6-210ENST00000622186 VWFP04275 2813 aa5.01□□□□□ -1.61
SLC6A6-210ENST00000622186 DNAH10Q8IVF4 4471 aa5.01□□□□□ -1.61
SLC6A6-210ENST00000622186 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
SLC6A6-210ENST00000622186 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
SLC6A6-210ENST00000622186 OTOGQ6ZRI0 2925 aa4.99□□□□□ -1.61
SLC6A6-210ENST00000622186 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
SLC6A6-210ENST00000622186 KRTAP3-3Q9BYR6 98 aa4.97□□□□□ -1.61
SLC6A6-210ENST00000622186 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.62
SLC6A6-210ENST00000622186 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
SLC6A6-210ENST00000622186 DNAH1Q9P2D7 4330 aa4.95□□□□□ -1.62
SLC6A6-210ENST00000622186 SPRR2DP22532 72 aa4.94□□□□□ -1.62
SLC6A6-210ENST00000622186 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
SLC6A6-210ENST00000622186 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
SLC6A6-210ENST00000622186 DNAH9Q9NYC9 4486 aa4.89□□□□□ -1.63
SLC6A6-210ENST00000622186 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
SLC6A6-210ENST00000622186 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
SLC6A6-210ENST00000622186 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.65
SLC6A6-210ENST00000622186 SRRM2Q9UQ35 2752 aaKnown RBP4.77□□□□□ -1.65
SLC6A6-210ENST00000622186 MT1HP80294 61 aa4.76□□□□□ -1.65
SLC6A6-210ENST00000622186 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
SLC6A6-210ENST00000622186 LCE2BO14633 110 aa4.72□□□□□ -1.65
SLC6A6-210ENST00000622186 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
SLC6A6-210ENST00000622186 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
SLC6A6-210ENST00000622186 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SLC6A6-210ENST00000622186 PRKDCP78527 4128 aaKnown RBP4.67□□□□□ -1.66
SLC6A6-210ENST00000622186 DYNC2H1Q8NCM8 4307 aaKnown RBP4.67□□□□□ -1.66
SLC6A6-210ENST00000622186 VPS13DQ5THJ4 4388 aa4.65□□□□□ -1.66
SLC6A6-210ENST00000622186 MT2AP02795 61 aa4.65□□□□□ -1.67
SLC6A6-210ENST00000622186 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.67
SLC6A6-210ENST00000622186 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
SLC6A6-210ENST00000622186 MEGF8Q7Z7M0 2845 aa4.63□□□□□ -1.67
SLC6A6-210ENST00000622186 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
SLC6A6-210ENST00000622186 DNAH8Q96JB1 4490 aa4.61□□□□□ -1.67
SLC6A6-210ENST00000622186 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
SLC6A6-210ENST00000622186 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
SLC6A6-210ENST00000622186 DNAH11Q96DT5 4516 aa4.59□□□□□ -1.67
SLC6A6-210ENST00000622186 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
SLC6A6-210ENST00000622186 COL7A1Q02388 2944 aa4.58□□□□□ -1.68
SLC6A6-210ENST00000622186 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
SLC6A6-210ENST00000622186 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
SLC6A6-210ENST00000622186 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
SLC6A6-210ENST00000622186 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
SLC6A6-210ENST00000622186 MT4P47944 62 aa4.53□□□□□ -1.68
SLC6A6-210ENST00000622186 MT1FP04733 61 aa4.51□□□□□ -1.69
SLC6A6-210ENST00000622186 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
SLC6A6-210ENST00000622186 MT1GP13640 62 aa4.46□□□□□ -1.7
SLC6A6-210ENST00000622186 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
SLC6A6-210ENST00000622186 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
SLC6A6-210ENST00000622186 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
SLC6A6-210ENST00000622186 PKD1P98161 4303 aa4.37□□□□□ -1.71
SLC6A6-210ENST00000622186 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
SLC6A6-210ENST00000622186 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SLC6A6-210ENST00000622186 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
SLC6A6-210ENST00000622186 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
SLC6A6-210ENST00000622186 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
SLC6A6-210ENST00000622186 LRP1BQ9NZR2 4599 aa4.27□□□□□ -1.73
SLC6A6-210ENST00000622186 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
SLC6A6-210ENST00000622186 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
SLC6A6-210ENST00000622186 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SLC6A6-210ENST00000622186 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
SLC6A6-210ENST00000622186 SACSQ9NZJ4 4579 aa4.17□□□□□ -1.74
SLC6A6-210ENST00000622186 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
SLC6A6-210ENST00000622186 FAT1Q14517 4588 aa4.14□□□□□ -1.75
SLC6A6-210ENST00000622186 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
SLC6A6-210ENST00000622186 TNXBP22105 4242 aa4.13□□□□□ -1.75
SLC6A6-210ENST00000622186 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SLC6A6-210ENST00000622186 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
SLC6A6-210ENST00000622186 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
SLC6A6-210ENST00000622186 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
SLC6A6-210ENST00000622186 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
SLC6A6-210ENST00000622186 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
SLC6A6-210ENST00000622186 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
SLC6A6-210ENST00000622186 HSPG2P98160 4391 aa4.06□□□□□ -1.76
SLC6A6-210ENST00000622186 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
SLC6A6-210ENST00000622186 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SLC6A6-210ENST00000622186 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SLC6A6-210ENST00000622186 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SLC6A6-210ENST00000622186 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SLC6A6-210ENST00000622186 MT1XP80297 61 aa4.02□□□□□ -1.77
SLC6A6-210ENST00000622186 LPAP08519 4548 aa4□□□□□ -1.77
SLC6A6-210ENST00000622186 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
SLC6A6-210ENST00000622186 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
SLC6A6-210ENST00000622186 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
SLC6A6-210ENST00000622186 MT3P25713 68 aa3.95□□□□□ -1.78
SLC6A6-210ENST00000622186 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
SLC6A6-210ENST00000622186 MT1BP07438 61 aa3.91□□□□□ -1.78
SLC6A6-210ENST00000622186 MYCBP2O75592 4640 aa3.91□□□□□ -1.78
SLC6A6-210ENST00000622186 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
SLC6A6-210ENST00000622186 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.8
SLC6A6-210ENST00000622186 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
SLC6A6-210ENST00000622186 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
SLC6A6-210ENST00000622186 HERC1Q15751 4861 aa3.81□□□□□ -1.8
SLC6A6-210ENST00000622186 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
SLC6A6-210ENST00000622186 PRM1P04553 51 aa3.8□□□□□ -1.8
SLC6A6-210ENST00000622186 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
SLC6A6-210ENST00000622186 RYR1P21817 5038 aa3.77□□□□□ -1.81
SLC6A6-210ENST00000622186 MT1LQ93083 61 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms