RNA–Protein interactions for RNA: ENST00000621791.4

CACNA1E-210, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1E, Length 16,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-210ENST00000621791 MUC3AQ02505 3323 aa3.02□□□□□ -1.93
CACNA1E-210ENST00000621791 FRAS1Q86XX4 4008 aa3.01□□□□□ -1.93
CACNA1E-210ENST00000621791 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
CACNA1E-210ENST00000621791 DNAH9Q9NYC9 4486 aa3.01□□□□□ -1.93
CACNA1E-210ENST00000621791 FAT1Q14517 4588 aa3.01□□□□□ -1.93
CACNA1E-210ENST00000621791 DNAH3Q8TD57 4116 aa3□□□□□ -1.93
CACNA1E-210ENST00000621791 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
CACNA1E-210ENST00000621791 CSMD2Q7Z408 3487 aa3□□□□□ -1.93
CACNA1E-210ENST00000621791 ANK2Q01484 3957 aa2.98□□□□□ -1.93
CACNA1E-210ENST00000621791 BSNQ9UPA5 3926 aa2.98□□□□□ -1.93
CACNA1E-210ENST00000621791 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
CACNA1E-210ENST00000621791 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
CACNA1E-210ENST00000621791 MYCBP2O75592 4640 aa2.91□□□□□ -1.94
CACNA1E-210ENST00000621791 LRP1BQ9NZR2 4599 aa2.9□□□□□ -1.95
CACNA1E-210ENST00000621791 SACSQ9NZJ4 4579 aa2.89□□□□□ -1.95
CACNA1E-210ENST00000621791 ZNF469Q96JG9 3925 aaPredicted RBP2.88□□□□□ -1.95
CACNA1E-210ENST00000621791 CMYA5Q8N3K9 4069 aa2.86□□□□□ -1.95
CACNA1E-210ENST00000621791 PRKDCP78527 4128 aaKnown RBP2.86□□□□□ -1.95
CACNA1E-210ENST00000621791 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
CACNA1E-210ENST00000621791 LYSTQ99698 3801 aa2.85□□□□□ -1.95
CACNA1E-210ENST00000621791 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
CACNA1E-210ENST00000621791 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.95
CACNA1E-210ENST00000621791 KRTAP10-12P60413 245 aa2.84□□□□□ -1.96
CACNA1E-210ENST00000621791 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
CACNA1E-210ENST00000621791 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
CACNA1E-210ENST00000621791 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
CACNA1E-210ENST00000621791 DYNC1H1Q14204 4646 aaKnown RBP2.82□□□□□ -1.96
CACNA1E-210ENST00000621791 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
CACNA1E-210ENST00000621791 PKD1P98161 4303 aa2.81□□□□□ -1.96
CACNA1E-210ENST00000621791 DYNC2H1Q8NCM8 4307 aaKnown RBP2.81□□□□□ -1.96
CACNA1E-210ENST00000621791 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
CACNA1E-210ENST00000621791 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
CACNA1E-210ENST00000621791 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
CACNA1E-210ENST00000621791 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
CACNA1E-210ENST00000621791 LRP1Q07954 4544 aaKnown RBP2.76□□□□□ -1.97
CACNA1E-210ENST00000621791 KRTAP4-5Q9BYR2 181 aa2.76□□□□□ -1.97
CACNA1E-210ENST00000621791 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
CACNA1E-210ENST00000621791 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
CACNA1E-210ENST00000621791 HSPG2P98160 4391 aa2.69□□□□□ -1.98
CACNA1E-210ENST00000621791 RYR1P21817 5038 aa2.66□□□□□ -1.98
CACNA1E-210ENST00000621791 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.99
CACNA1E-210ENST00000621791 TNXBP22105 4242 aa2.62□□□□□ -1.99
CACNA1E-210ENST00000621791 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
CACNA1E-210ENST00000621791 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
CACNA1E-210ENST00000621791 PKHD1P08F94 4074 aa2.56□□□□□ -2
CACNA1E-210ENST00000621791 DNHD1Q96M86 4753 aa2.55□□□□□ -2
CACNA1E-210ENST00000621791 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
CACNA1E-210ENST00000621791 RYR3Q15413 4870 aa2.54□□□□□ -2
CACNA1E-210ENST00000621791 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
CACNA1E-210ENST00000621791 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
CACNA1E-210ENST00000621791 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CACNA1E-210ENST00000621791 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
CACNA1E-210ENST00000621791 STARD9Q9P2P6 4700 aa2.48□□□□□ -2.01
CACNA1E-210ENST00000621791 MT1HP80294 61 aa2.47□□□□□ -2.01
CACNA1E-210ENST00000621791 HYDINQ4G0P3 5121 aa2.47□□□□□ -2.01
CACNA1E-210ENST00000621791 HERC2O95714 4834 aa2.46□□□□□ -2.02
CACNA1E-210ENST00000621791 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
CACNA1E-210ENST00000621791 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
CACNA1E-210ENST00000621791 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
CACNA1E-210ENST00000621791 RYR2Q92736 4967 aa2.43□□□□□ -2.02
CACNA1E-210ENST00000621791 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
CACNA1E-210ENST00000621791 MT2AP02795 61 aa2.4□□□□□ -2.03
CACNA1E-210ENST00000621791 MT1FP04733 61 aa2.39□□□□□ -2.03
CACNA1E-210ENST00000621791 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
CACNA1E-210ENST00000621791 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
CACNA1E-210ENST00000621791 LRP2P98164 4655 aa2.35□□□□□ -2.03
CACNA1E-210ENST00000621791 MT1XP80297 61 aa2.35□□□□□ -2.03
CACNA1E-210ENST00000621791 HERC1Q15751 4861 aa2.35□□□□□ -2.03
CACNA1E-210ENST00000621791 KRTAP19-1Q8IUB9 90 aa2.35□□□□□ -2.03
CACNA1E-210ENST00000621791 MUC17Q685J3 4493 aa2.34□□□□□ -2.03
CACNA1E-210ENST00000621791 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
CACNA1E-210ENST00000621791 KRTAP17-1Q9BYP8 105 aa2.32□□□□□ -2.04
CACNA1E-210ENST00000621791 KIAA1109Q2LD37 5005 aa2.31□□□□□ -2.04
CACNA1E-210ENST00000621791 LCE3BQ5TA77 95 aa2.3□□□□□ -2.04
CACNA1E-210ENST00000621791 SPRR2EP22531 72 aa2.29□□□□□ -2.04
CACNA1E-210ENST00000621791 SPRR2BP35325 72 aa2.29□□□□□ -2.04
CACNA1E-210ENST00000621791 SPRR2AP35326 72 aa2.29□□□□□ -2.04
CACNA1E-210ENST00000621791 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
CACNA1E-210ENST00000621791 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
CACNA1E-210ENST00000621791 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
CACNA1E-210ENST00000621791 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
CACNA1E-210ENST00000621791 MT1GP13640 62 aa2.22□□□□□ -2.05
CACNA1E-210ENST00000621791 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
CACNA1E-210ENST00000621791 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
CACNA1E-210ENST00000621791 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
CACNA1E-210ENST00000621791 MT1BP07438 61 aa2.22□□□□□ -2.05
CACNA1E-210ENST00000621791 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.06
CACNA1E-210ENST00000621791 KRTAP9-3Q9BYQ3 159 aa2.21□□□□□ -2.06
CACNA1E-210ENST00000621791 SPRR2DP22532 72 aa2.2□□□□□ -2.06
CACNA1E-210ENST00000621791 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
CACNA1E-210ENST00000621791 KRTAP4-7Q9BYR0 210 aa2.19□□□□□ -2.06
CACNA1E-210ENST00000621791 LCE2BO14633 110 aa2.19□□□□□ -2.06
CACNA1E-210ENST00000621791 LPAP08519 4548 aa2.18□□□□□ -2.06
CACNA1E-210ENST00000621791 LCE2CQ5TA81 110 aa2.17□□□□□ -2.06
CACNA1E-210ENST00000621791 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
CACNA1E-210ENST00000621791 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
CACNA1E-210ENST00000621791 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
CACNA1E-210ENST00000621791 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
CACNA1E-210ENST00000621791 MT1LQ93083 61 aa2.13□□□□□ -2.07
CACNA1E-210ENST00000621791 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms