RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 BATFQ16520 125 aa2.39□□□□□ -2.03
PDE4D-227ENST00000621323 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
PDE4D-227ENST00000621323 A0A1B0GU33 70 aa2.38□□□□□ -2.03
PDE4D-227ENST00000621323 CYSTM1Q9H1C7 97 aa2.38□□□□□ -2.03
PDE4D-227ENST00000621323 P0C880 135 aa2.37□□□□□ -2.03
PDE4D-227ENST00000621323 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
PDE4D-227ENST00000621323 MT1EP04732 61 aa2.36□□□□□ -2.03
PDE4D-227ENST00000621323 COPS9Q8WXC6 57 aa2.36□□□□□ -2.03
PDE4D-227ENST00000621323 FABP4P15090 132 aa2.35□□□□□ -2.03
PDE4D-227ENST00000621323 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
PDE4D-227ENST00000621323 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
PDE4D-227ENST00000621323 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
PDE4D-227ENST00000621323 C12orf57Q99622 126 aa2.34□□□□□ -2.03
PDE4D-227ENST00000621323 A0A1B0GV72 72 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 TMEM218A2RU14 115 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 A8MUN3 132 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 TRGC2P03986 189 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 S100A6P06703 90 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 C2orf91Q6ZV80 131 aa2.33□□□□□ -2.04
PDE4D-227ENST00000621323 BVES-AS1Q5T3Y7 98 aa2.32□□□□□ -2.04
PDE4D-227ENST00000621323 ANKRD29Q8N6D5 301 aa2.32□□□□□ -2.04
PDE4D-227ENST00000621323 TRACP01848 142 aa2.31□□□□□ -2.04
PDE4D-227ENST00000621323 CCKP06307 115 aa2.31□□□□□ -2.04
PDE4D-227ENST00000621323 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
PDE4D-227ENST00000621323 H0YAA0 97 aa2.3□□□□□ -2.04
PDE4D-227ENST00000621323 H3BPC8 53 aa2.3□□□□□ -2.04
PDE4D-227ENST00000621323 FABP2P12104 132 aa2.3□□□□□ -2.04
PDE4D-227ENST00000621323 SYS1-DBNDD2H3BUS1 97 aa2.29□□□□□ -2.04
PDE4D-227ENST00000621323 J3KT08 172 aa2.29□□□□□ -2.04
PDE4D-227ENST00000621323 K7EQZ3 153 aa2.29□□□□□ -2.04
PDE4D-227ENST00000621323 LINC01545Q5VT33 79 aa2.29□□□□□ -2.04
PDE4D-227ENST00000621323 MMP24-AS1A0A0U1RRL7 71 aa2.28□□□□□ -2.04
PDE4D-227ENST00000621323 PDE6GP18545 87 aa2.28□□□□□ -2.04
PDE4D-227ENST00000621323 MT1MQ8N339 61 aa2.27□□□□□ -2.05
PDE4D-227ENST00000621323 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
PDE4D-227ENST00000621323 A0A087WVE0 104 aa2.26□□□□□ -2.05
PDE4D-227ENST00000621323 NDUFB1O75438 58 aa2.26□□□□□ -2.05
PDE4D-227ENST00000621323 MT1GP13640 62 aa2.26□□□□□ -2.05
PDE4D-227ENST00000621323 TMEM254Q8TBM7 123 aa2.26□□□□□ -2.05
PDE4D-227ENST00000621323 A0A1B0GW54 56 aa2.24□□□□□ -2.05
PDE4D-227ENST00000621323 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
PDE4D-227ENST00000621323 VPS25Q9BRG1 176 aa2.23□□□□□ -2.05
PDE4D-227ENST00000621323 Q6ZQT0 140 aa2.22□□□□□ -2.05
PDE4D-227ENST00000621323 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
PDE4D-227ENST00000621323 hDV103S1A0JD37 113 aa2.21□□□□□ -2.06
PDE4D-227ENST00000621323 H0YGX0 51 aa2.21□□□□□ -2.06
PDE4D-227ENST00000621323 TMEM258P61165 79 aa2.21□□□□□ -2.06
PDE4D-227ENST00000621323 CLLU1Q5K131 121 aa2.21□□□□□ -2.06
PDE4D-227ENST00000621323 A0A1B0GX51 115 aa2.2□□□□□ -2.06
PDE4D-227ENST00000621323 H3BT86 120 aa2.2□□□□□ -2.06
PDE4D-227ENST00000621323 SNCGO76070 127 aa2.2□□□□□ -2.06
PDE4D-227ENST00000621323 ATOH7Q8N100 152 aa2.19□□□□□ -2.06
PDE4D-227ENST00000621323 MT1LQ93083 61 aa2.17□□□□□ -2.06
PDE4D-227ENST00000621323 ORMDL1Q9P0S3 153 aa2.17□□□□□ -2.06
PDE4D-227ENST00000621323 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
PDE4D-227ENST00000621323 HIST1H4AP62805 103 aaKnown RBP2.15□□□□□ -2.07
PDE4D-227ENST00000621323 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
PDE4D-227ENST00000621323 TMEM256-PLSCR3K7ERE1 68 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 M0QZ58 72 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
PDE4D-227ENST00000621323 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
PDE4D-227ENST00000621323 APOC3P02656 99 aa2.13□□□□□ -2.07
PDE4D-227ENST00000621323 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
PDE4D-227ENST00000621323 KRTDAPP60985 99 aa2.13□□□□□ -2.07
PDE4D-227ENST00000621323 TRAV7A0A075B6U4 112 aa2.12□□□□□ -2.07
PDE4D-227ENST00000621323 DNAL4O96015 105 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BOP23527 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BBP33778 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BDP58876 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BCP62807 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST2H2BEQ16778 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BHQ93079 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BNQ99877 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 HIST1H2BMQ99879 126 aa2.11□□□□□ -2.07
PDE4D-227ENST00000621323 SVBPQ8N300 66 aa2.1□□□□□ -2.07
PDE4D-227ENST00000621323 C9JAW5 83 aa2.09□□□□□ -2.07
PDE4D-227ENST00000621323 NDUFA5Q16718 116 aa2.09□□□□□ -2.07
PDE4D-227ENST00000621323 NDUFC1O43677 76 aa2.08□□□□□ -2.08
PDE4D-227ENST00000621323 HIST1H2BKO60814 126 aa2.07□□□□□ -2.08
PDE4D-227ENST00000621323 HIST1H2BJP06899 126 aa2.07□□□□□ -2.08
PDE4D-227ENST00000621323 CASC2Q6XLA1 102 aa2.06□□□□□ -2.08
PDE4D-227ENST00000621323 FXYD2P54710 66 aa2.04□□□□□ -2.08
PDE4D-227ENST00000621323 NREPQ16612 68 aa2.04□□□□□ -2.08
PDE4D-227ENST00000621323 PRO1854Q9UHT4 67 aa2.04□□□□□ -2.08
PDE4D-227ENST00000621323 LOC110117498A0A087WWA1 95 aa2.03□□□□□ -2.08
PDE4D-227ENST00000621323 K7EP34 96 aa2.03□□□□□ -2.08
PDE4D-227ENST00000621323 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
PDE4D-227ENST00000621323 COA5Q86WW8 74 aa2.02□□□□□ -2.09
PDE4D-227ENST00000621323 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
PDE4D-227ENST00000621323 HIST3H2BBQ8N257 126 aa2.01□□□□□ -2.09
PDE4D-227ENST00000621323 C20orf197Q8N268 126 aa2.01□□□□□ -2.09
PDE4D-227ENST00000621323 KRTAP12-1P59990 96 aa2□□□□□ -2.09
PDE4D-227ENST00000621323 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
PDE4D-227ENST00000621323 COX8AP10176 69 aa1.99□□□□□ -2.09
PDE4D-227ENST00000621323 A0A0D9SG42 100 aa1.98□□□□□ -2.09
PDE4D-227ENST00000621323 K7ERJ3 54 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms