RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 DMBT1Q9UGM3 2413 aaPredicted RBP4.33□□□□□ -1.72
GDNF-208ENST00000620847 RYR2Q92736 4967 aa4.3□□□□□ -1.72
GDNF-208ENST00000620847 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
GDNF-208ENST00000620847 LCE2BO14633 110 aa4.29□□□□□ -1.72
GDNF-208ENST00000620847 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
GDNF-208ENST00000620847 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
GDNF-208ENST00000620847 TNXBP22105 4242 aa4.26□□□□□ -1.73
GDNF-208ENST00000620847 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
GDNF-208ENST00000620847 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
GDNF-208ENST00000620847 P0C880 135 aa4.22□□□□□ -1.73
GDNF-208ENST00000620847 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
GDNF-208ENST00000620847 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
GDNF-208ENST00000620847 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
GDNF-208ENST00000620847 HSPG2P98160 4391 aa4.19□□□□□ -1.74
GDNF-208ENST00000620847 Q5VSD8 79 aa4.17□□□□□ -1.74
GDNF-208ENST00000620847 A0A0D9SG42 100 aa4.16□□□□□ -1.74
GDNF-208ENST00000620847 XP32Q5T750 250 aa4.15□□□□□ -1.75
GDNF-208ENST00000620847 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
GDNF-208ENST00000620847 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
GDNF-208ENST00000620847 RYR1P21817 5038 aa4.12□□□□□ -1.75
GDNF-208ENST00000620847 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
GDNF-208ENST00000620847 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
GDNF-208ENST00000620847 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
GDNF-208ENST00000620847 RYR3Q15413 4870 aa4.1□□□□□ -1.75
GDNF-208ENST00000620847 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
GDNF-208ENST00000620847 S4R3F8 94 aa4.09□□□□□ -1.75
GDNF-208ENST00000620847 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
GDNF-208ENST00000620847 LCE2CQ5TA81 110 aa4.09□□□□□ -1.76
GDNF-208ENST00000620847 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
GDNF-208ENST00000620847 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
GDNF-208ENST00000620847 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
GDNF-208ENST00000620847 LPAP08519 4548 aa4.02□□□□□ -1.77
GDNF-208ENST00000620847 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
GDNF-208ENST00000620847 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
GDNF-208ENST00000620847 LRP2P98164 4655 aa3.99□□□□□ -1.77
GDNF-208ENST00000620847 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
GDNF-208ENST00000620847 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
GDNF-208ENST00000620847 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
GDNF-208ENST00000620847 M0QZ58 72 aa3.94□□□□□ -1.78
GDNF-208ENST00000620847 BIRC6Q9NR09 4857 aa3.94□□□□□ -1.78
GDNF-208ENST00000620847 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
GDNF-208ENST00000620847 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
GDNF-208ENST00000620847 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
GDNF-208ENST00000620847 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
GDNF-208ENST00000620847 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
GDNF-208ENST00000620847 HERC2O95714 4834 aa3.81□□□□□ -1.8
GDNF-208ENST00000620847 R4GN34 69 aa3.8□□□□□ -1.8
GDNF-208ENST00000620847 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
GDNF-208ENST00000620847 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
GDNF-208ENST00000620847 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
GDNF-208ENST00000620847 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
GDNF-208ENST00000620847 PP632Q6XCG6 107 aa3.71□□□□□ -1.81
GDNF-208ENST00000620847 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
GDNF-208ENST00000620847 HERC1Q15751 4861 aa3.65□□□□□ -1.82
GDNF-208ENST00000620847 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.83
GDNF-208ENST00000620847 MUC2Q02817 5179 aa3.64□□□□□ -1.83
GDNF-208ENST00000620847 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
GDNF-208ENST00000620847 TNP1P09430 55 aa3.54□□□□□ -1.84
GDNF-208ENST00000620847 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
GDNF-208ENST00000620847 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
GDNF-208ENST00000620847 M0R2T5 61 aa3.49□□□□□ -1.85
GDNF-208ENST00000620847 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
GDNF-208ENST00000620847 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
GDNF-208ENST00000620847 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
GDNF-208ENST00000620847 SPRR2GQ9BYE4 73 aa3.46□□□□□ -1.86
GDNF-208ENST00000620847 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
GDNF-208ENST00000620847 MT1HP80294 61 aa3.41□□□□□ -1.86
GDNF-208ENST00000620847 MT2AP02795 61 aa3.36□□□□□ -1.87
GDNF-208ENST00000620847 MT1FP04733 61 aa3.36□□□□□ -1.87
GDNF-208ENST00000620847 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
GDNF-208ENST00000620847 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
GDNF-208ENST00000620847 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
GDNF-208ENST00000620847 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
GDNF-208ENST00000620847 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
GDNF-208ENST00000620847 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
GDNF-208ENST00000620847 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
GDNF-208ENST00000620847 INE1O15225 51 aa3.3□□□□□ -1.88
GDNF-208ENST00000620847 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
GDNF-208ENST00000620847 MT1BP07438 61 aa3.26□□□□□ -1.89
GDNF-208ENST00000620847 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
GDNF-208ENST00000620847 MT1XP80297 61 aa3.24□□□□□ -1.89
GDNF-208ENST00000620847 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
GDNF-208ENST00000620847 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
GDNF-208ENST00000620847 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
GDNF-208ENST00000620847 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
GDNF-208ENST00000620847 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
GDNF-208ENST00000620847 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
GDNF-208ENST00000620847 KRTAP9-6A0A140TA67 174 aa3.04□□□□□ -1.92
GDNF-208ENST00000620847 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
GDNF-208ENST00000620847 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
GDNF-208ENST00000620847 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
GDNF-208ENST00000620847 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
GDNF-208ENST00000620847 USH2AO75445 5202 aa2.98□□□□□ -1.93
GDNF-208ENST00000620847 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
GDNF-208ENST00000620847 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
GDNF-208ENST00000620847 KMT2DO14686 5537 aa2.94□□□□□ -1.94
GDNF-208ENST00000620847 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
GDNF-208ENST00000620847 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
GDNF-208ENST00000620847 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
GDNF-208ENST00000620847 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms