RNA–Protein interactions for RNA: ENST00000620693.4

PACSIN1-207, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-207ENST00000620693 FAT1Q14517 4588 aa6.52□□□□□ -1.37
PACSIN1-207ENST00000620693 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
PACSIN1-207ENST00000620693 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
PACSIN1-207ENST00000620693 HECTD4Q9Y4D8 3996 aa6.49□□□□□ -1.37
PACSIN1-207ENST00000620693 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
PACSIN1-207ENST00000620693 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
PACSIN1-207ENST00000620693 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
PACSIN1-207ENST00000620693 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
PACSIN1-207ENST00000620693 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
PACSIN1-207ENST00000620693 DYNC1H1Q14204 4646 aaKnown RBP6.41□□□□□ -1.38
PACSIN1-207ENST00000620693 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
PACSIN1-207ENST00000620693 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
PACSIN1-207ENST00000620693 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
PACSIN1-207ENST00000620693 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
PACSIN1-207ENST00000620693 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
PACSIN1-207ENST00000620693 XP32Q5T750 250 aa6.35□□□□□ -1.39
PACSIN1-207ENST00000620693 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
PACSIN1-207ENST00000620693 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
PACSIN1-207ENST00000620693 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
PACSIN1-207ENST00000620693 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
PACSIN1-207ENST00000620693 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
PACSIN1-207ENST00000620693 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
PACSIN1-207ENST00000620693 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
PACSIN1-207ENST00000620693 MYCBP2O75592 4640 aa6.23□□□□□ -1.41
PACSIN1-207ENST00000620693 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
PACSIN1-207ENST00000620693 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
PACSIN1-207ENST00000620693 RYR2Q92736 4967 aa6.21□□□□□ -1.42
PACSIN1-207ENST00000620693 RYR3Q15413 4870 aa6.21□□□□□ -1.42
PACSIN1-207ENST00000620693 PKD1P98161 4303 aa6.17□□□□□ -1.42
PACSIN1-207ENST00000620693 RYR1P21817 5038 aa6.17□□□□□ -1.42
PACSIN1-207ENST00000620693 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
PACSIN1-207ENST00000620693 TNP1P09430 55 aa6.13□□□□□ -1.43
PACSIN1-207ENST00000620693 M0R2T5 61 aa6.12□□□□□ -1.43
PACSIN1-207ENST00000620693 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
PACSIN1-207ENST00000620693 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
PACSIN1-207ENST00000620693 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
PACSIN1-207ENST00000620693 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
PACSIN1-207ENST00000620693 EPPK1P58107 5090 aaKnown RBP5.98□□□□□ -1.45
PACSIN1-207ENST00000620693 HSPG2P98160 4391 aa5.94□□□□□ -1.46
PACSIN1-207ENST00000620693 LRP2P98164 4655 aa5.85□□□□□ -1.47
PACSIN1-207ENST00000620693 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
PACSIN1-207ENST00000620693 HERC2O95714 4834 aa5.82□□□□□ -1.48
PACSIN1-207ENST00000620693 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
PACSIN1-207ENST00000620693 LPAP08519 4548 aa5.75□□□□□ -1.49
PACSIN1-207ENST00000620693 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
PACSIN1-207ENST00000620693 TNXBP22105 4242 aa5.69□□□□□ -1.5
PACSIN1-207ENST00000620693 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
PACSIN1-207ENST00000620693 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
PACSIN1-207ENST00000620693 MUC2Q02817 5179 aa5.56□□□□□ -1.52
PACSIN1-207ENST00000620693 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
PACSIN1-207ENST00000620693 HERC1Q15751 4861 aa5.55□□□□□ -1.52
PACSIN1-207ENST00000620693 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
PACSIN1-207ENST00000620693 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
PACSIN1-207ENST00000620693 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
PACSIN1-207ENST00000620693 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
PACSIN1-207ENST00000620693 INE1O15225 51 aa5.41□□□□□ -1.54
PACSIN1-207ENST00000620693 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
PACSIN1-207ENST00000620693 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
PACSIN1-207ENST00000620693 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
PACSIN1-207ENST00000620693 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
PACSIN1-207ENST00000620693 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
PACSIN1-207ENST00000620693 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
PACSIN1-207ENST00000620693 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
PACSIN1-207ENST00000620693 MT1HP80294 61 aa5.12□□□□□ -1.59
PACSIN1-207ENST00000620693 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
PACSIN1-207ENST00000620693 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
PACSIN1-207ENST00000620693 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
PACSIN1-207ENST00000620693 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
PACSIN1-207ENST00000620693 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
PACSIN1-207ENST00000620693 MT1FP04733 61 aa5.01□□□□□ -1.61
PACSIN1-207ENST00000620693 MT2AP02795 61 aa5.01□□□□□ -1.61
PACSIN1-207ENST00000620693 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
PACSIN1-207ENST00000620693 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
PACSIN1-207ENST00000620693 LCE2BO14633 110 aa4.92□□□□□ -1.62
PACSIN1-207ENST00000620693 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
PACSIN1-207ENST00000620693 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.62
PACSIN1-207ENST00000620693 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
PACSIN1-207ENST00000620693 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
PACSIN1-207ENST00000620693 USH2AO75445 5202 aa4.76□□□□□ -1.65
PACSIN1-207ENST00000620693 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
PACSIN1-207ENST00000620693 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
PACSIN1-207ENST00000620693 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
PACSIN1-207ENST00000620693 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
PACSIN1-207ENST00000620693 MT1BP07438 61 aa4.68□□□□□ -1.66
PACSIN1-207ENST00000620693 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
PACSIN1-207ENST00000620693 MT1XP80297 61 aa4.66□□□□□ -1.66
PACSIN1-207ENST00000620693 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
PACSIN1-207ENST00000620693 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
PACSIN1-207ENST00000620693 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
PACSIN1-207ENST00000620693 KMT2DO14686 5537 aa4.52□□□□□ -1.69
PACSIN1-207ENST00000620693 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
PACSIN1-207ENST00000620693 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
PACSIN1-207ENST00000620693 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
PACSIN1-207ENST00000620693 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
PACSIN1-207ENST00000620693 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
PACSIN1-207ENST00000620693 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
PACSIN1-207ENST00000620693 MT1GP13640 62 aa4.27□□□□□ -1.73
PACSIN1-207ENST00000620693 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
PACSIN1-207ENST00000620693 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
PACSIN1-207ENST00000620693 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms