RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 DNHD1Q96M86 4753 aa4.36□□□□□ -1.71
SRSF3-207ENST00000620389 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SRSF3-207ENST00000620389 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
SRSF3-207ENST00000620389 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
SRSF3-207ENST00000620389 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SRSF3-207ENST00000620389 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.71
SRSF3-207ENST00000620389 DNAH6Q9C0G6 4158 aa4.32□□□□□ -1.72
SRSF3-207ENST00000620389 PRKDCP78527 4128 aaKnown RBP4.29□□□□□ -1.72
SRSF3-207ENST00000620389 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
SRSF3-207ENST00000620389 RPS29P62273 56 aaKnown RBP4.27□□□□□ -1.73
SRSF3-207ENST00000620389 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
SRSF3-207ENST00000620389 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
SRSF3-207ENST00000620389 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
SRSF3-207ENST00000620389 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
SRSF3-207ENST00000620389 M0QZ58 72 aa4.18□□□□□ -1.74
SRSF3-207ENST00000620389 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SRSF3-207ENST00000620389 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
SRSF3-207ENST00000620389 KRTAP10-1P60331 282 aa4.14□□□□□ -1.75
SRSF3-207ENST00000620389 FAT2Q9NYQ8 4349 aa4.13□□□□□ -1.75
SRSF3-207ENST00000620389 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
SRSF3-207ENST00000620389 PKHD1P08F94 4074 aa4.09□□□□□ -1.76
SRSF3-207ENST00000620389 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
SRSF3-207ENST00000620389 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
SRSF3-207ENST00000620389 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
SRSF3-207ENST00000620389 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
SRSF3-207ENST00000620389 PKD1P98161 4303 aa4.03□□□□□ -1.76
SRSF3-207ENST00000620389 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
SRSF3-207ENST00000620389 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
SRSF3-207ENST00000620389 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
SRSF3-207ENST00000620389 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
SRSF3-207ENST00000620389 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
SRSF3-207ENST00000620389 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
SRSF3-207ENST00000620389 R4GN34 69 aa3.98□□□□□ -1.77
SRSF3-207ENST00000620389 HSPG2P98160 4391 aa3.98□□□□□ -1.77
SRSF3-207ENST00000620389 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SRSF3-207ENST00000620389 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
SRSF3-207ENST00000620389 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
SRSF3-207ENST00000620389 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
SRSF3-207ENST00000620389 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
SRSF3-207ENST00000620389 INE1O15225 51 aa3.9□□□□□ -1.79
SRSF3-207ENST00000620389 FAT1Q14517 4588 aa3.88□□□□□ -1.79
SRSF3-207ENST00000620389 RYR2Q92736 4967 aa3.87□□□□□ -1.79
SRSF3-207ENST00000620389 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
SRSF3-207ENST00000620389 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
SRSF3-207ENST00000620389 TNXBP22105 4242 aa3.85□□□□□ -1.79
SRSF3-207ENST00000620389 RYR3Q15413 4870 aa3.85□□□□□ -1.79
SRSF3-207ENST00000620389 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
SRSF3-207ENST00000620389 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
SRSF3-207ENST00000620389 KMT2CQ8NEZ4 4911 aaKnown RBP3.84□□□□□ -1.79
SRSF3-207ENST00000620389 LPAP08519 4548 aa3.83□□□□□ -1.8
SRSF3-207ENST00000620389 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
SRSF3-207ENST00000620389 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
SRSF3-207ENST00000620389 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
SRSF3-207ENST00000620389 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
SRSF3-207ENST00000620389 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
SRSF3-207ENST00000620389 TNP1P09430 55 aa3.75□□□□□ -1.81
SRSF3-207ENST00000620389 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
SRSF3-207ENST00000620389 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
SRSF3-207ENST00000620389 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
SRSF3-207ENST00000620389 HERC2O95714 4834 aa3.71□□□□□ -1.82
SRSF3-207ENST00000620389 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
SRSF3-207ENST00000620389 Q5VSD8 79 aa3.68□□□□□ -1.82
SRSF3-207ENST00000620389 LRP2P98164 4655 aa3.68□□□□□ -1.82
SRSF3-207ENST00000620389 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
SRSF3-207ENST00000620389 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
SRSF3-207ENST00000620389 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SRSF3-207ENST00000620389 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.83
SRSF3-207ENST00000620389 RYR1P21817 5038 aa3.57□□□□□ -1.84
SRSF3-207ENST00000620389 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
SRSF3-207ENST00000620389 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
SRSF3-207ENST00000620389 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
SRSF3-207ENST00000620389 KIAA1109Q2LD37 5005 aa3.5□□□□□ -1.85
SRSF3-207ENST00000620389 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
SRSF3-207ENST00000620389 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
SRSF3-207ENST00000620389 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
SRSF3-207ENST00000620389 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.86
SRSF3-207ENST00000620389 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
SRSF3-207ENST00000620389 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
SRSF3-207ENST00000620389 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
SRSF3-207ENST00000620389 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
SRSF3-207ENST00000620389 KRTAP10-10P60014 251 aa3.4□□□□□ -1.86
SRSF3-207ENST00000620389 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
SRSF3-207ENST00000620389 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
SRSF3-207ENST00000620389 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
SRSF3-207ENST00000620389 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
SRSF3-207ENST00000620389 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
SRSF3-207ENST00000620389 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
SRSF3-207ENST00000620389 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
SRSF3-207ENST00000620389 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SRSF3-207ENST00000620389 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SRSF3-207ENST00000620389 HERC1Q15751 4861 aa3.24□□□□□ -1.89
SRSF3-207ENST00000620389 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
SRSF3-207ENST00000620389 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
SRSF3-207ENST00000620389 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
SRSF3-207ENST00000620389 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
SRSF3-207ENST00000620389 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
SRSF3-207ENST00000620389 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
SRSF3-207ENST00000620389 MT1XP80297 61 aa3.08□□□□□ -1.92
SRSF3-207ENST00000620389 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
SRSF3-207ENST00000620389 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms