RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	PKHD1L1	Q86WI1	4243 aa		7.49	□□□□□ -1.21
SMTN-223	ENST00000619644	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.48	□□□□□ -1.21
SMTN-223	ENST00000619644		A0A0A0MQY5	61 aa		7.47	□□□□□ -1.21
SMTN-223	ENST00000619644		Q5VSD8	79 aa		7.47	□□□□□ -1.21
SMTN-223	ENST00000619644	RPL37	P61927	97 aa	Known RBP	7.46	□□□□□ -1.21
SMTN-223	ENST00000619644	KRTAP21-3	Q3LHN1	58 aa		7.45	□□□□□ -1.22
SMTN-223	ENST00000619644	HSPG2	P98160	4391 aa		7.44	□□□□□ -1.22
SMTN-223	ENST00000619644	KRTAP10-8	P60410	259 aa		7.43	□□□□□ -1.22
SMTN-223	ENST00000619644	TPRXL	Q17RH7	258 aa		7.43	□□□□□ -1.22
SMTN-223	ENST00000619644	KRTAP13-4	Q3LI77	160 aa		7.43	□□□□□ -1.22
SMTN-223	ENST00000619644	SPINT4	Q6UDR6	99 aa		7.43	□□□□□ -1.22
SMTN-223	ENST00000619644	KRTAP10-6	P60371	365 aa	Predicted RBP	7.42	□□□□□ -1.22
SMTN-223	ENST00000619644		S4R3F8	94 aa		7.42	□□□□□ -1.22
SMTN-223	ENST00000619644	FAT3	Q8TDW7	4589 aa		7.41	□□□□□ -1.22
SMTN-223	ENST00000619644	RYR2	Q92736	4967 aa		7.4	□□□□□ -1.22
SMTN-223	ENST00000619644	XP32	Q5T750	250 aa		7.4	□□□□□ -1.23
SMTN-223	ENST00000619644	KRTAP3-3	Q9BYR6	98 aa		7.37	□□□□□ -1.23
SMTN-223	ENST00000619644	C10orf95	Q9H7T3	257 aa		7.37	□□□□□ -1.23
SMTN-223	ENST00000619644	KRTAP3-2	Q9BYR7	98 aa		7.33	□□□□□ -1.24
SMTN-223	ENST00000619644	TNXB	P22105	4242 aa		7.32	□□□□□ -1.24
SMTN-223	ENST00000619644	NDUFAF8	A1L188	74 aa		7.26	□□□□□ -1.25
SMTN-223	ENST00000619644	KRTAP15-1	Q3LI76	137 aa		7.26	□□□□□ -1.25
SMTN-223	ENST00000619644	KIAA1109	Q2LD37	5005 aa		7.22	□□□□□ -1.25
SMTN-223	ENST00000619644	LPA	P08519	4548 aa		7.22	□□□□□ -1.25
SMTN-223	ENST00000619644	KRTAP12-2	P59991	146 aa		7.22	□□□□□ -1.25
SMTN-223	ENST00000619644	KRTAP17-1	Q9BYP8	105 aa		7.21	□□□□□ -1.26
SMTN-223	ENST00000619644	LRP2	P98164	4655 aa		7.18	□□□□□ -1.26
SMTN-223	ENST00000619644	RYR3	Q15413	4870 aa		7.18	□□□□□ -1.26
SMTN-223	ENST00000619644	RYR1	P21817	5038 aa		7.14	□□□□□ -1.27
SMTN-223	ENST00000619644	MT1HL1	P0DM35	61 aa		7.13	□□□□□ -1.27
SMTN-223	ENST00000619644	KRTAP12-1	P59990	96 aa		7.12	□□□□□ -1.27
SMTN-223	ENST00000619644		M0QZ58	72 aa		7.01	□□□□□ -1.29
SMTN-223	ENST00000619644		J3QL48	77 aa		6.99	□□□□□ -1.29
SMTN-223	ENST00000619644	ABCA13	Q86UQ4	5058 aa		6.98	□□□□□ -1.29
SMTN-223	ENST00000619644		R4GN34	69 aa		6.97	□□□□□ -1.29
SMTN-223	ENST00000619644	EPPK1	P58107	5090 aa	Known RBP	6.93	□□□□□ -1.3
SMTN-223	ENST00000619644	KRTAP4-5	Q9BYR2	181 aa		6.92	□□□□□ -1.3
SMTN-223	ENST00000619644	SEC61B	P60468	96 aa	Known RBP	6.83	□□□□□ -1.32
SMTN-223	ENST00000619644	LOR	P23490	312 aa	Predicted RBP	6.81	□□□□□ -1.32
SMTN-223	ENST00000619644	PLAC4	Q8WY50	150 aa		6.77	□□□□□ -1.33
SMTN-223	ENST00000619644	LUZP6	Q538Z0	58 aa		6.76	□□□□□ -1.33
SMTN-223	ENST00000619644	KRTAP4-1	Q9BYQ7	146 aa		6.73	□□□□□ -1.33
SMTN-223	ENST00000619644	MUC2	Q02817	5179 aa		6.7	□□□□□ -1.34
SMTN-223	ENST00000619644	CAMK2N1	Q7Z7J9	78 aa		6.69	□□□□□ -1.34
SMTN-223	ENST00000619644	MUC17	Q685J3	4493 aa		6.65	□□□□□ -1.35
SMTN-223	ENST00000619644	HERC2	O95714	4834 aa		6.6	□□□□□ -1.35
SMTN-223	ENST00000619644	PP632	Q6XCG6	107 aa		6.5	□□□□□ -1.37
SMTN-223	ENST00000619644	KRTAP19-2	Q3LHN2	52 aa		6.43	□□□□□ -1.38
SMTN-223	ENST00000619644	HERC1	Q15751	4861 aa		6.37	□□□□□ -1.39
SMTN-223	ENST00000619644	BIRC6	Q9NR09	4857 aa		6.37	□□□□□ -1.39
SMTN-223	ENST00000619644	FAT4	Q6V0I7	4981 aa		6.35	□□□□□ -1.39
SMTN-223	ENST00000619644	FLG	P20930	4061 aa	Predicted RBP	6.33	□□□□□ -1.4
SMTN-223	ENST00000619644	PCLO	Q9Y6V0	5065 aa		6.33	□□□□□ -1.4
SMTN-223	ENST00000619644		M0R2T5	61 aa		6.33	□□□□□ -1.4
SMTN-223	ENST00000619644	TNP1	P09430	55 aa		6.33	□□□□□ -1.4
SMTN-223	ENST00000619644	SPRR5	A0A1B0GTR4	108 aa		6.21	□□□□□ -1.41
SMTN-223	ENST00000619644	RNF213	Q63HN8	5207 aa		6.19	□□□□□ -1.42
SMTN-223	ENST00000619644	KRTAP23-1	A1A580	65 aa		6.16	□□□□□ -1.42
SMTN-223	ENST00000619644	HMCN2	Q8NDA2	5059 aa		6.13	□□□□□ -1.43
SMTN-223	ENST00000619644	KRTAP10-10	P60014	251 aa		6.09	□□□□□ -1.43
SMTN-223	ENST00000619644	LCE2C	Q5TA81	110 aa		6.08	□□□□□ -1.44
SMTN-223	ENST00000619644	KRTAP19-1	Q8IUB9	90 aa		6.04	□□□□□ -1.44
SMTN-223	ENST00000619644	UBR4	Q5T4S7	5183 aa		6.04	□□□□□ -1.44
SMTN-223	ENST00000619644	SPRR2G	Q9BYE4	73 aa		6.01	□□□□□ -1.45
SMTN-223	ENST00000619644	MT1H	P80294	61 aa		5.98	□□□□□ -1.45
SMTN-223	ENST00000619644	LCE3A	Q5TA76	89 aa		5.98	□□□□□ -1.45
SMTN-223	ENST00000619644	MT1F	P04733	61 aa		5.95	□□□□□ -1.46
SMTN-223	ENST00000619644	MT2A	P02795	61 aa		5.92	□□□□□ -1.46
SMTN-223	ENST00000619644	PRO2289	Q9P1D8	64 aa		5.88	□□□□□ -1.47
SMTN-223	ENST00000619644	KRTAP9-8	Q9BYQ0	159 aa		5.82	□□□□□ -1.48
SMTN-223	ENST00000619644	INE1	O15225	51 aa		5.75	□□□□□ -1.49
SMTN-223	ENST00000619644	MT1B	P07438	61 aa		5.71	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP10-5	P60370	271 aa		5.71	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP10-12	P60413	245 aa		5.7	□□□□□ -1.5
SMTN-223	ENST00000619644	MT1X	P80297	61 aa		5.7	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP8-1	Q8IUC2	63 aa		5.7	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP19-8	Q3LI54	63 aa		5.69	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP12-3	P60328	96 aa		5.67	□□□□□ -1.5
SMTN-223	ENST00000619644	KRTAP10-7	P60409	375 aa	Predicted RBP	5.64	□□□□□ -1.51
SMTN-223	ENST00000619644	USH2A	O75445	5202 aa		5.58	□□□□□ -1.52
SMTN-223	ENST00000619644	KRTAP9-3	Q9BYQ3	159 aa		5.55	□□□□□ -1.52
SMTN-223	ENST00000619644	KMT2D	O14686	5537 aa		5.53	□□□□□ -1.52
SMTN-223	ENST00000619644	KRTAP19-5	Q3LI72	72 aa		5.42	□□□□□ -1.54
SMTN-223	ENST00000619644	LCE2B	O14633	110 aa		5.39	□□□□□ -1.55
SMTN-223	ENST00000619644	FSIP2	Q5CZC0	6907 aa		5.36	□□□□□ -1.55
SMTN-223	ENST00000619644	KRTAP4-8	A0A0G2JLE6	195 aa		5.35	□□□□□ -1.55
SMTN-223	ENST00000619644	KRTAP4-8	Q9BYQ9	185 aa		5.35	□□□□□ -1.55
SMTN-223	ENST00000619644	LCE3C	Q5T5A8	94 aa		5.29	□□□□□ -1.56
SMTN-223	ENST00000619644	KRTAP4-7	Q9BYR0	210 aa		5.19	□□□□□ -1.58
SMTN-223	ENST00000619644	KRTAP9-6	A8MVA2	160 aa		5.14	□□□□□ -1.59
SMTN-223	ENST00000619644	LCE2A	Q5TA79	106 aa	Predicted RBP	5.1	□□□□□ -1.59
SMTN-223	ENST00000619644	KRTAP19-7	Q3SYF9	63 aa		5.06	□□□□□ -1.6
SMTN-223	ENST00000619644	KRTAP2-3	P0C7H8	128 aa		5.04	□□□□□ -1.6
SMTN-223	ENST00000619644	KRTAP2-4	Q9BYR9	128 aa		5.04	□□□□□ -1.6
SMTN-223	ENST00000619644	KRTAP2-1	Q9BYU5	128 aa		5.04	□□□□□ -1.6
SMTN-223	ENST00000619644	MT1L	Q93083	61 aa		4.93	□□□□□ -1.62
SMTN-223	ENST00000619644	SSPO	A2VEC9	5147 aa		4.93	□□□□□ -1.62
SMTN-223	ENST00000619644	MT1E	P04732	61 aa		4.91	□□□□□ -1.62
SMTN-223	ENST00000619644	CRCT1	Q9UGL9	99 aa		4.88	□□□□□ -1.63
SMTN-223	ENST00000619644	MUC12	Q9UKN1	5478 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms