RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 INE1O15225 51 aa5.35□□□□□ -1.55
HNF4A-209ENST00000619550 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
HNF4A-209ENST00000619550 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
HNF4A-209ENST00000619550 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
HNF4A-209ENST00000619550 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
HNF4A-209ENST00000619550 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
HNF4A-209ENST00000619550 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
HNF4A-209ENST00000619550 DNAH1Q9P2D7 4330 aa5.19□□□□□ -1.58
HNF4A-209ENST00000619550 VPS13DQ5THJ4 4388 aa5.17□□□□□ -1.58
HNF4A-209ENST00000619550 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.59
HNF4A-209ENST00000619550 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
HNF4A-209ENST00000619550 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
HNF4A-209ENST00000619550 HYDINQ4G0P3 5121 aa5.1□□□□□ -1.59
HNF4A-209ENST00000619550 DNAH2Q9P225 4427 aa5.09□□□□□ -1.59
HNF4A-209ENST00000619550 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
HNF4A-209ENST00000619550 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
HNF4A-209ENST00000619550 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
HNF4A-209ENST00000619550 HECTD4Q9Y4D8 3996 aa5.02□□□□□ -1.61
HNF4A-209ENST00000619550 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
HNF4A-209ENST00000619550 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
HNF4A-209ENST00000619550 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
HNF4A-209ENST00000619550 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.62
HNF4A-209ENST00000619550 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
HNF4A-209ENST00000619550 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
HNF4A-209ENST00000619550 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
HNF4A-209ENST00000619550 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
HNF4A-209ENST00000619550 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
HNF4A-209ENST00000619550 FAT1Q14517 4588 aa4.9□□□□□ -1.62
HNF4A-209ENST00000619550 FAT2Q9NYQ8 4349 aa4.89□□□□□ -1.63
HNF4A-209ENST00000619550 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
HNF4A-209ENST00000619550 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
HNF4A-209ENST00000619550 PKD1P98161 4303 aa4.85□□□□□ -1.63
HNF4A-209ENST00000619550 RYR2Q92736 4967 aa4.84□□□□□ -1.63
HNF4A-209ENST00000619550 RYR3Q15413 4870 aa4.77□□□□□ -1.65
HNF4A-209ENST00000619550 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
HNF4A-209ENST00000619550 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
HNF4A-209ENST00000619550 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
HNF4A-209ENST00000619550 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
HNF4A-209ENST00000619550 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
HNF4A-209ENST00000619550 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
HNF4A-209ENST00000619550 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
HNF4A-209ENST00000619550 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
HNF4A-209ENST00000619550 RYR1P21817 5038 aa4.64□□□□□ -1.67
HNF4A-209ENST00000619550 HSPG2P98160 4391 aa4.63□□□□□ -1.67
HNF4A-209ENST00000619550 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
HNF4A-209ENST00000619550 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
HNF4A-209ENST00000619550 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
HNF4A-209ENST00000619550 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
HNF4A-209ENST00000619550 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
HNF4A-209ENST00000619550 MT1HP80294 61 aa4.48□□□□□ -1.69
HNF4A-209ENST00000619550 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
HNF4A-209ENST00000619550 HERC2O95714 4834 aa4.45□□□□□ -1.7
HNF4A-209ENST00000619550 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
HNF4A-209ENST00000619550 TNXBP22105 4242 aa4.43□□□□□ -1.7
HNF4A-209ENST00000619550 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
HNF4A-209ENST00000619550 MT2AP02795 61 aa4.41□□□□□ -1.7
HNF4A-209ENST00000619550 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
HNF4A-209ENST00000619550 LRP2P98164 4655 aa4.39□□□□□ -1.71
HNF4A-209ENST00000619550 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
HNF4A-209ENST00000619550 LPAP08519 4548 aa4.38□□□□□ -1.71
HNF4A-209ENST00000619550 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
HNF4A-209ENST00000619550 MT1FP04733 61 aa4.29□□□□□ -1.72
HNF4A-209ENST00000619550 HERC1Q15751 4861 aa4.26□□□□□ -1.73
HNF4A-209ENST00000619550 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
HNF4A-209ENST00000619550 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
HNF4A-209ENST00000619550 MUC2Q02817 5179 aa4.19□□□□□ -1.74
HNF4A-209ENST00000619550 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
HNF4A-209ENST00000619550 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
HNF4A-209ENST00000619550 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
HNF4A-209ENST00000619550 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
HNF4A-209ENST00000619550 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
HNF4A-209ENST00000619550 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
HNF4A-209ENST00000619550 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
HNF4A-209ENST00000619550 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
HNF4A-209ENST00000619550 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
HNF4A-209ENST00000619550 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
HNF4A-209ENST00000619550 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
HNF4A-209ENST00000619550 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
HNF4A-209ENST00000619550 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
HNF4A-209ENST00000619550 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
HNF4A-209ENST00000619550 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
HNF4A-209ENST00000619550 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
HNF4A-209ENST00000619550 MT1XP80297 61 aa3.95□□□□□ -1.78
HNF4A-209ENST00000619550 MT1BP07438 61 aa3.95□□□□□ -1.78
HNF4A-209ENST00000619550 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
HNF4A-209ENST00000619550 SPRR2EP22531 72 aa3.92□□□□□ -1.78
HNF4A-209ENST00000619550 SPRR2BP35325 72 aa3.92□□□□□ -1.78
HNF4A-209ENST00000619550 SPRR2AP35326 72 aa3.92□□□□□ -1.78
HNF4A-209ENST00000619550 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
HNF4A-209ENST00000619550 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
HNF4A-209ENST00000619550 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
HNF4A-209ENST00000619550 SPRR2DP22532 72 aa3.82□□□□□ -1.8
HNF4A-209ENST00000619550 MT1GP13640 62 aa3.79□□□□□ -1.8
HNF4A-209ENST00000619550 LCE2BO14633 110 aa3.74□□□□□ -1.81
HNF4A-209ENST00000619550 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
HNF4A-209ENST00000619550 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
HNF4A-209ENST00000619550 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
HNF4A-209ENST00000619550 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
HNF4A-209ENST00000619550 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
HNF4A-209ENST00000619550 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms