RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RYR2Q92736 4967 aa10.48□□□□□ -0.73
NEK3-208ENST00000618534 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
NEK3-208ENST00000618534 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
NEK3-208ENST00000618534 HSPG2P98160 4391 aa10.45□□□□□ -0.74
NEK3-208ENST00000618534 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
NEK3-208ENST00000618534 KRTAP10-8P60410 259 aa10.44□□□□□ -0.74
NEK3-208ENST00000618534 KRTAP13-4Q3LI77 160 aa10.43□□□□□ -0.74
NEK3-208ENST00000618534 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
NEK3-208ENST00000618534 XP32Q5T750 250 aa10.39□□□□□ -0.75
NEK3-208ENST00000618534 S4R3F8 94 aa10.38□□□□□ -0.75
NEK3-208ENST00000618534 A0A0D9SG42 100 aa10.37□□□□□ -0.75
NEK3-208ENST00000618534 ROMO1P60602 79 aa10.35□□□□□ -0.75
NEK3-208ENST00000618534 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
NEK3-208ENST00000618534 Q5VSD8 79 aa10.32□□□□□ -0.76
NEK3-208ENST00000618534 RYR3Q15413 4870 aa10.28□□□□□ -0.76
NEK3-208ENST00000618534 P0C880 135 aa10.27□□□□□ -0.76
NEK3-208ENST00000618534 H3BS24 57 aa10.19□□□□□ -0.78
NEK3-208ENST00000618534 KRTAP17-1Q9BYP8 105 aa10.15□□□□□ -0.79
NEK3-208ENST00000618534 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
NEK3-208ENST00000618534 KRTAP12-2P59991 146 aa10.1□□□□□ -0.79
NEK3-208ENST00000618534 RYR1P21817 5038 aa10.09□□□□□ -0.79
NEK3-208ENST00000618534 MT1HL1P0DM35 61 aa10.08□□□□□ -0.8
NEK3-208ENST00000618534 C10orf95Q9H7T3 257 aa10.06□□□□□ -0.8
NEK3-208ENST00000618534 LPAP08519 4548 aa10.05□□□□□ -0.8
NEK3-208ENST00000618534 KRTAP12-1P59990 96 aa10.01□□□□□ -0.81
NEK3-208ENST00000618534 SPINT4Q6UDR6 99 aa9.99□□□□□ -0.81
NEK3-208ENST00000618534 LRP2P98164 4655 aa9.96□□□□□ -0.81
NEK3-208ENST00000618534 KIAA1109Q2LD37 5005 aa9.93□□□□□ -0.82
NEK3-208ENST00000618534 EPPK1P58107 5090 aaKnown RBP9.92□□□□□ -0.82
NEK3-208ENST00000618534 M0QZ58 72 aa9.88□□□□□ -0.83
NEK3-208ENST00000618534 KRTAP15-1Q3LI76 137 aa9.72□□□□□ -0.85
NEK3-208ENST00000618534 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
NEK3-208ENST00000618534 R4GN34 69 aa9.64□□□□□ -0.87
NEK3-208ENST00000618534 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
NEK3-208ENST00000618534 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
NEK3-208ENST00000618534 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
NEK3-208ENST00000618534 MUC17Q685J3 4493 aa9.52□□□□□ -0.88
NEK3-208ENST00000618534 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
NEK3-208ENST00000618534 KRTAP4-1Q9BYQ7 146 aa9.47□□□□□ -0.89
NEK3-208ENST00000618534 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
NEK3-208ENST00000618534 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
NEK3-208ENST00000618534 HERC2O95714 4834 aa9.28□□□□□ -0.92
NEK3-208ENST00000618534 J3QL48 77 aa9.22□□□□□ -0.93
NEK3-208ENST00000618534 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
NEK3-208ENST00000618534 CAMK2N1Q7Z7J9 78 aa9.17□□□□□ -0.94
NEK3-208ENST00000618534 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
NEK3-208ENST00000618534 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
NEK3-208ENST00000618534 MUC2Q02817 5179 aa9.04□□□□□ -0.96
NEK3-208ENST00000618534 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
NEK3-208ENST00000618534 HERC1Q15751 4861 aa8.92□□□□□ -0.98
NEK3-208ENST00000618534 TNP1P09430 55 aa8.83□□□□□ -1
NEK3-208ENST00000618534 LUZP6Q538Z0 58 aa8.8□□□□□ -1
NEK3-208ENST00000618534 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.01
NEK3-208ENST00000618534 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
NEK3-208ENST00000618534 LCE2CQ5TA81 110 aa8.67□□□□□ -1.02
NEK3-208ENST00000618534 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
NEK3-208ENST00000618534 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
NEK3-208ENST00000618534 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
NEK3-208ENST00000618534 SPRR5A0A1B0GTR4 108 aa8.55□□□□□ -1.04
NEK3-208ENST00000618534 M0R2T5 61 aa8.47□□□□□ -1.05
NEK3-208ENST00000618534 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
NEK3-208ENST00000618534 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
NEK3-208ENST00000618534 MT1HP80294 61 aa8.42□□□□□ -1.06
NEK3-208ENST00000618534 LCE3AQ5TA76 89 aa8.4□□□□□ -1.07
NEK3-208ENST00000618534 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
NEK3-208ENST00000618534 MT1FP04733 61 aa8.37□□□□□ -1.07
NEK3-208ENST00000618534 MT2AP02795 61 aa8.34□□□□□ -1.07
NEK3-208ENST00000618534 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
NEK3-208ENST00000618534 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
NEK3-208ENST00000618534 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
NEK3-208ENST00000618534 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
NEK3-208ENST00000618534 MT1BP07438 61 aa8.12□□□□□ -1.11
NEK3-208ENST00000618534 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
NEK3-208ENST00000618534 MT1XP80297 61 aa8.1□□□□□ -1.11
NEK3-208ENST00000618534 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
NEK3-208ENST00000618534 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
NEK3-208ENST00000618534 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
NEK3-208ENST00000618534 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
NEK3-208ENST00000618534 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.17
NEK3-208ENST00000618534 INE1O15225 51 aa7.61□□□□□ -1.19
NEK3-208ENST00000618534 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
NEK3-208ENST00000618534 LCE2BO14633 110 aa7.57□□□□□ -1.2
NEK3-208ENST00000618534 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
NEK3-208ENST00000618534 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
NEK3-208ENST00000618534 USH2AO75445 5202 aa7.43□□□□□ -1.22
NEK3-208ENST00000618534 KMT2DO14686 5537 aa7.42□□□□□ -1.22
NEK3-208ENST00000618534 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
NEK3-208ENST00000618534 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
NEK3-208ENST00000618534 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
NEK3-208ENST00000618534 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
NEK3-208ENST00000618534 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
NEK3-208ENST00000618534 KRTAP2-3P0C7H8 128 aa7.05□□□□□ -1.28
NEK3-208ENST00000618534 KRTAP2-4Q9BYR9 128 aa7.05□□□□□ -1.28
NEK3-208ENST00000618534 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
NEK3-208ENST00000618534 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
NEK3-208ENST00000618534 MT1LQ93083 61 aa7.02□□□□□ -1.29
NEK3-208ENST00000618534 MT1EP04732 61 aa6.99□□□□□ -1.29
NEK3-208ENST00000618534 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
NEK3-208ENST00000618534 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
NEK3-208ENST00000618534 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms