RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
RECQL4-209ENST00000617875 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
RECQL4-209ENST00000617875 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
RECQL4-209ENST00000617875 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
RECQL4-209ENST00000617875 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
RECQL4-209ENST00000617875 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
RECQL4-209ENST00000617875 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
RECQL4-209ENST00000617875 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
RECQL4-209ENST00000617875 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
RECQL4-209ENST00000617875 DYNC2H1Q8NCM8 4307 aaKnown RBP8.01□□□□□ -1.13
RECQL4-209ENST00000617875 M0R2T5 61 aa8□□□□□ -1.13
RECQL4-209ENST00000617875 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
RECQL4-209ENST00000617875 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
RECQL4-209ENST00000617875 LUZP6Q538Z0 58 aa7.97□□□□□ -1.13
RECQL4-209ENST00000617875 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
RECQL4-209ENST00000617875 KIAA1109Q2LD37 5005 aa7.93□□□□□ -1.14
RECQL4-209ENST00000617875 SACSQ9NZJ4 4579 aa7.92□□□□□ -1.14
RECQL4-209ENST00000617875 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
RECQL4-209ENST00000617875 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
RECQL4-209ENST00000617875 RYR1P21817 5038 aa7.88□□□□□ -1.15
RECQL4-209ENST00000617875 ALMS1Q8TCU4 4167 aa7.87□□□□□ -1.15
RECQL4-209ENST00000617875 APOBP04114 4563 aaKnown RBP7.85□□□□□ -1.15
RECQL4-209ENST00000617875 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
RECQL4-209ENST00000617875 FAT2Q9NYQ8 4349 aa7.83□□□□□ -1.16
RECQL4-209ENST00000617875 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
RECQL4-209ENST00000617875 KRTAP4-5Q9BYR2 181 aa7.8□□□□□ -1.16
RECQL4-209ENST00000617875 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
RECQL4-209ENST00000617875 KMT2CQ8NEZ4 4911 aaKnown RBP7.74□□□□□ -1.17
RECQL4-209ENST00000617875 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
RECQL4-209ENST00000617875 RYR3Q15413 4870 aa7.7□□□□□ -1.18
RECQL4-209ENST00000617875 LRP2P98164 4655 aa7.67□□□□□ -1.18
RECQL4-209ENST00000617875 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
RECQL4-209ENST00000617875 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
RECQL4-209ENST00000617875 PKD1P98161 4303 aa7.58□□□□□ -1.2
RECQL4-209ENST00000617875 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
RECQL4-209ENST00000617875 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
RECQL4-209ENST00000617875 HSPG2P98160 4391 aa7.51□□□□□ -1.21
RECQL4-209ENST00000617875 LPAP08519 4548 aa7.45□□□□□ -1.22
RECQL4-209ENST00000617875 RYR2Q92736 4967 aa7.43□□□□□ -1.22
RECQL4-209ENST00000617875 TNP1P09430 55 aa7.42□□□□□ -1.22
RECQL4-209ENST00000617875 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
RECQL4-209ENST00000617875 EPPK1P58107 5090 aaKnown RBP7.34□□□□□ -1.23
RECQL4-209ENST00000617875 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
RECQL4-209ENST00000617875 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
RECQL4-209ENST00000617875 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
RECQL4-209ENST00000617875 MUC2Q02817 5179 aa7.23□□□□□ -1.25
RECQL4-209ENST00000617875 HERC2O95714 4834 aa7.17□□□□□ -1.26
RECQL4-209ENST00000617875 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
RECQL4-209ENST00000617875 TNXBP22105 4242 aa7.04□□□□□ -1.28
RECQL4-209ENST00000617875 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
RECQL4-209ENST00000617875 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
RECQL4-209ENST00000617875 HERC1Q15751 4861 aa6.85□□□□□ -1.31
RECQL4-209ENST00000617875 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
RECQL4-209ENST00000617875 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
RECQL4-209ENST00000617875 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
RECQL4-209ENST00000617875 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
RECQL4-209ENST00000617875 MT1FP04733 61 aa6.56□□□□□ -1.36
RECQL4-209ENST00000617875 MT1HP80294 61 aa6.56□□□□□ -1.36
RECQL4-209ENST00000617875 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
RECQL4-209ENST00000617875 MT2AP02795 61 aa6.52□□□□□ -1.37
RECQL4-209ENST00000617875 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
RECQL4-209ENST00000617875 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
RECQL4-209ENST00000617875 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
RECQL4-209ENST00000617875 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
RECQL4-209ENST00000617875 BIRC6Q9NR09 4857 aa6.47□□□□□ -1.37
RECQL4-209ENST00000617875 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
RECQL4-209ENST00000617875 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
RECQL4-209ENST00000617875 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
RECQL4-209ENST00000617875 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
RECQL4-209ENST00000617875 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
RECQL4-209ENST00000617875 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
RECQL4-209ENST00000617875 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
RECQL4-209ENST00000617875 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
RECQL4-209ENST00000617875 USH2AO75445 5202 aa6.25□□□□□ -1.41
RECQL4-209ENST00000617875 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
RECQL4-209ENST00000617875 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
RECQL4-209ENST00000617875 INE1O15225 51 aa6.14□□□□□ -1.43
RECQL4-209ENST00000617875 MT1XP80297 61 aa6.14□□□□□ -1.43
RECQL4-209ENST00000617875 MT1BP07438 61 aa6.13□□□□□ -1.43
RECQL4-209ENST00000617875 KMT2DO14686 5537 aa6.12□□□□□ -1.43
RECQL4-209ENST00000617875 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
RECQL4-209ENST00000617875 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
RECQL4-209ENST00000617875 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.45
RECQL4-209ENST00000617875 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
RECQL4-209ENST00000617875 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
RECQL4-209ENST00000617875 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
RECQL4-209ENST00000617875 LCE2BO14633 110 aa5.86□□□□□ -1.47
RECQL4-209ENST00000617875 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
RECQL4-209ENST00000617875 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
RECQL4-209ENST00000617875 MT1GP13640 62 aa5.54□□□□□ -1.52
RECQL4-209ENST00000617875 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
RECQL4-209ENST00000617875 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
RECQL4-209ENST00000617875 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
RECQL4-209ENST00000617875 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
RECQL4-209ENST00000617875 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms