RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 LCE2CQ5TA81 110 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 CSMD1Q96PZ7 3565 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 RELNP78509 3460 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 KRTAP23-1A1A580 65 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 KRTAP7-1Q8IUC3 87 aa1.56□□□□□ -2.16
LPP-220ENST00000617246 PRKDCP78527 4128 aaKnown RBP1.56□□□□□ -2.16
LPP-220ENST00000617246 HRNRQ86YZ3 2850 aaPredicted RBP1.56□□□□□ -2.16
LPP-220ENST00000617246 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
LPP-220ENST00000617246 SPRR2EP22531 72 aa1.55□□□□□ -2.16
LPP-220ENST00000617246 SPRR2BP35325 72 aa1.55□□□□□ -2.16
LPP-220ENST00000617246 SPRR2AP35326 72 aa1.55□□□□□ -2.16
LPP-220ENST00000617246 SPRR2DP22532 72 aa1.55□□□□□ -2.16
LPP-220ENST00000617246 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
LPP-220ENST00000617246 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
LPP-220ENST00000617246 MT1HL1P0DM35 61 aa1.54□□□□□ -2.16
LPP-220ENST00000617246 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
LPP-220ENST00000617246 DNAH10Q8IVF4 4471 aa1.53□□□□□ -2.16
LPP-220ENST00000617246 LCE2BO14633 110 aa1.53□□□□□ -2.17
LPP-220ENST00000617246 ZNF469Q96JG9 3925 aaPredicted RBP1.53□□□□□ -2.17
LPP-220ENST00000617246 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
LPP-220ENST00000617246 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
LPP-220ENST00000617246 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
LPP-220ENST00000617246 KRTAP9-6A0A140TA67 174 aa1.49□□□□□ -2.17
LPP-220ENST00000617246 SACSQ9NZJ4 4579 aa1.49□□□□□ -2.17
LPP-220ENST00000617246 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
LPP-220ENST00000617246 KRTAP10-4P60372 401 aaPredicted RBP1.48□□□□□ -2.17
LPP-220ENST00000617246 KRTAP19-4Q3LI73 84 aa1.48□□□□□ -2.17
LPP-220ENST00000617246 KRTAP4-5Q9BYR2 181 aa1.48□□□□□ -2.17
LPP-220ENST00000617246 PKHD1L1Q86WI1 4243 aa1.48□□□□□ -2.17
LPP-220ENST00000617246 CSMD3Q7Z407 3707 aa1.47□□□□□ -2.17
LPP-220ENST00000617246 DNAH5Q8TE73 4624 aa1.47□□□□□ -2.17
LPP-220ENST00000617246 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
LPP-220ENST00000617246 INE1O15225 51 aa1.46□□□□□ -2.18
LPP-220ENST00000617246 MT1HP80294 61 aa1.46□□□□□ -2.18
LPP-220ENST00000617246 LCE2AQ5TA79 106 aaPredicted RBP1.46□□□□□ -2.18
LPP-220ENST00000617246 MUC3AQ02505 3323 aa1.45□□□□□ -2.18
LPP-220ENST00000617246 LYSTQ99698 3801 aa1.45□□□□□ -2.18
LPP-220ENST00000617246 KRTAP9-2Q9BYQ4 174 aa1.44□□□□□ -2.18
LPP-220ENST00000617246 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
LPP-220ENST00000617246 FAT2Q9NYQ8 4349 aa1.44□□□□□ -2.18
LPP-220ENST00000617246 MEGF8Q7Z7M0 2845 aa1.43□□□□□ -2.18
LPP-220ENST00000617246 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
LPP-220ENST00000617246 DYNC1H1Q14204 4646 aaKnown RBP1.43□□□□□ -2.18
LPP-220ENST00000617246 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
LPP-220ENST00000617246 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
LPP-220ENST00000617246 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
LPP-220ENST00000617246 CSMD2Q7Z408 3487 aa1.41□□□□□ -2.18
LPP-220ENST00000617246 SPRR5A0A1B0GTR4 108 aa1.4□□□□□ -2.19
LPP-220ENST00000617246 HSPG2P98160 4391 aa1.39□□□□□ -2.19
LPP-220ENST00000617246 MT3P25713 68 aa1.38□□□□□ -2.19
LPP-220ENST00000617246 PKD1P98161 4303 aa1.38□□□□□ -2.19
LPP-220ENST00000617246 KRTAP9-7A8MTY7 169 aa1.37□□□□□ -2.19
LPP-220ENST00000617246 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
LPP-220ENST00000617246 BIRC6Q9NR09 4857 aa1.37□□□□□ -2.19
LPP-220ENST00000617246 HERC1Q15751 4861 aa1.36□□□□□ -2.19
LPP-220ENST00000617246 LCE3BQ5TA77 95 aa1.35□□□□□ -2.19
LPP-220ENST00000617246 FAT3Q8TDW7 4589 aa1.35□□□□□ -2.19
LPP-220ENST00000617246 FAT1Q14517 4588 aa1.35□□□□□ -2.19
LPP-220ENST00000617246 KRTAP3-1Q9BYR8 98 aa1.34□□□□□ -2.19
LPP-220ENST00000617246 KRTAP10-5P60370 271 aa1.34□□□□□ -2.2
LPP-220ENST00000617246 LRP1BQ9NZR2 4599 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 MT2AP02795 61 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 KRTAP19-1Q8IUB9 90 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 LCE3AQ5TA76 89 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 KRTAP17-1Q9BYP8 105 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 FLGP20930 4061 aaPredicted RBP1.33□□□□□ -2.2
LPP-220ENST00000617246 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
LPP-220ENST00000617246 MUC17Q685J3 4493 aa1.32□□□□□ -2.2
LPP-220ENST00000617246 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
LPP-220ENST00000617246 SPRR2GQ9BYE4 73 aa1.32□□□□□ -2.2
LPP-220ENST00000617246 LPAP08519 4548 aa1.31□□□□□ -2.2
LPP-220ENST00000617246 RYR3Q15413 4870 aa1.31□□□□□ -2.2
LPP-220ENST00000617246 TNXBP22105 4242 aa1.31□□□□□ -2.2
LPP-220ENST00000617246 RYR2Q92736 4967 aa1.29□□□□□ -2.2
LPP-220ENST00000617246 KMT2CQ8NEZ4 4911 aaKnown RBP1.28□□□□□ -2.2
LPP-220ENST00000617246 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.21
LPP-220ENST00000617246 HYDINQ4G0P3 5121 aa1.27□□□□□ -2.21
LPP-220ENST00000617246 MT1FP04733 61 aa1.27□□□□□ -2.21
LPP-220ENST00000617246 LRP1Q07954 4544 aaKnown RBP1.26□□□□□ -2.21
LPP-220ENST00000617246 MT1GP13640 62 aa1.26□□□□□ -2.21
LPP-220ENST00000617246 RYR1P21817 5038 aa1.24□□□□□ -2.21
LPP-220ENST00000617246 LCE4AQ5TA78 99 aa1.24□□□□□ -2.21
LPP-220ENST00000617246 HERC2O95714 4834 aa1.23□□□□□ -2.21
LPP-220ENST00000617246 KRTAP19-8Q3LI54 63 aa1.23□□□□□ -2.21
LPP-220ENST00000617246 KRTAP2-2Q9BYT5 123 aa1.23□□□□□ -2.21
LPP-220ENST00000617246 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
LPP-220ENST00000617246 MT4P47944 62 aa1.23□□□□□ -2.21
LPP-220ENST00000617246 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.22□□□□□ -2.21
LPP-220ENST00000617246 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
LPP-220ENST00000617246 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
LPP-220ENST00000617246 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
LPP-220ENST00000617246 LCE1AQ5T7P2 110 aa1.2□□□□□ -2.22
LPP-220ENST00000617246 LRP2P98164 4655 aa1.19□□□□□ -2.22
LPP-220ENST00000617246 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
LPP-220ENST00000617246 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
LPP-220ENST00000617246 LCE3CQ5T5A8 94 aa1.18□□□□□ -2.22
LPP-220ENST00000617246 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
LPP-220ENST00000617246 KRTAP9-9Q9BYP9 154 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms