RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 KRTAP10-6P60371 365 aaPredicted RBP12.43□□□□□ -0.42
GTF2IP1-204ENST00000616377 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
GTF2IP1-204ENST00000616377 ROMO1P60602 79 aa12.41□□□□□ -0.42
GTF2IP1-204ENST00000616377 HSPG2P98160 4391 aa12.4□□□□□ -0.42
GTF2IP1-204ENST00000616377 KRTAP13-4Q3LI77 160 aa12.39□□□□□ -0.43
GTF2IP1-204ENST00000616377 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
GTF2IP1-204ENST00000616377 DMBT1Q9UGM3 2413 aaPredicted RBP12.34□□□□□ -0.43
GTF2IP1-204ENST00000616377 TNXBP22105 4242 aa12.34□□□□□ -0.43
GTF2IP1-204ENST00000616377 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
GTF2IP1-204ENST00000616377 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
GTF2IP1-204ENST00000616377 A0A0D9SG42 100 aa12.31□□□□□ -0.44
GTF2IP1-204ENST00000616377 KRTAP10-8P60410 259 aa12.27□□□□□ -0.44
GTF2IP1-204ENST00000616377 MYCBP2O75592 4640 aa12.23□□□□□ -0.45
GTF2IP1-204ENST00000616377 S4R3F8 94 aa12.21□□□□□ -0.45
GTF2IP1-204ENST00000616377 P0C880 135 aa12.16□□□□□ -0.46
GTF2IP1-204ENST00000616377 XP32Q5T750 250 aa12.15□□□□□ -0.46
GTF2IP1-204ENST00000616377 TPRXLQ17RH7 258 aa12.13□□□□□ -0.47
GTF2IP1-204ENST00000616377 RYR1P21817 5038 aa12.03□□□□□ -0.48
GTF2IP1-204ENST00000616377 C10orf95Q9H7T3 257 aa12.03□□□□□ -0.48
GTF2IP1-204ENST00000616377 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
GTF2IP1-204ENST00000616377 KRTAP12-2P59991 146 aa12□□□□□ -0.49
GTF2IP1-204ENST00000616377 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
GTF2IP1-204ENST00000616377 Q5VSD8 79 aa11.95□□□□□ -0.5
GTF2IP1-204ENST00000616377 KRTAP17-1Q9BYP8 105 aa11.95□□□□□ -0.5
GTF2IP1-204ENST00000616377 LPAP08519 4548 aa11.93□□□□□ -0.5
GTF2IP1-204ENST00000616377 SPINT4Q6UDR6 99 aa11.93□□□□□ -0.5
GTF2IP1-204ENST00000616377 KRTAP12-1P59990 96 aa11.87□□□□□ -0.51
GTF2IP1-204ENST00000616377 LRP2P98164 4655 aa11.75□□□□□ -0.53
GTF2IP1-204ENST00000616377 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
GTF2IP1-204ENST00000616377 KRTAP15-1Q3LI76 137 aa11.69□□□□□ -0.54
GTF2IP1-204ENST00000616377 M0QZ58 72 aa11.67□□□□□ -0.54
GTF2IP1-204ENST00000616377 NDUFAF8A1L188 74 aa11.58□□□□□ -0.56
GTF2IP1-204ENST00000616377 KRTAP4-5Q9BYR2 181 aa11.51□□□□□ -0.57
GTF2IP1-204ENST00000616377 ABCA13Q86UQ4 5058 aa11.39□□□□□ -0.59
GTF2IP1-204ENST00000616377 R4GN34 69 aa11.36□□□□□ -0.59
GTF2IP1-204ENST00000616377 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
GTF2IP1-204ENST00000616377 HERC2O95714 4834 aa11.26□□□□□ -0.61
GTF2IP1-204ENST00000616377 LORP23490 312 aaPredicted RBP11.25□□□□□ -0.61
GTF2IP1-204ENST00000616377 MUC17Q685J3 4493 aa11.24□□□□□ -0.61
GTF2IP1-204ENST00000616377 KRTAP4-1Q9BYQ7 146 aa11.05□□□□□ -0.64
GTF2IP1-204ENST00000616377 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
GTF2IP1-204ENST00000616377 PLAC4Q8WY50 150 aa11.03□□□□□ -0.64
GTF2IP1-204ENST00000616377 J3QL48 77 aa10.96□□□□□ -0.65
GTF2IP1-204ENST00000616377 PCLOQ9Y6V0 5065 aa10.93□□□□□ -0.66
GTF2IP1-204ENST00000616377 KRTAP19-2Q3LHN2 52 aa10.87□□□□□ -0.67
GTF2IP1-204ENST00000616377 CAMK2N1Q7Z7J9 78 aa10.82□□□□□ -0.68
GTF2IP1-204ENST00000616377 HERC1Q15751 4861 aa10.8□□□□□ -0.68
GTF2IP1-204ENST00000616377 PP632Q6XCG6 107 aa10.76□□□□□ -0.69
GTF2IP1-204ENST00000616377 MUC2Q02817 5179 aa10.69□□□□□ -0.7
GTF2IP1-204ENST00000616377 FLGP20930 4061 aaPredicted RBP10.61□□□□□ -0.71
GTF2IP1-204ENST00000616377 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
GTF2IP1-204ENST00000616377 LUZP6Q538Z0 58 aa10.54□□□□□ -0.72
GTF2IP1-204ENST00000616377 A0A0A0MQY5 61 aa10.46□□□□□ -0.73
GTF2IP1-204ENST00000616377 TNP1P09430 55 aa10.44□□□□□ -0.74
GTF2IP1-204ENST00000616377 KRTAP23-1A1A580 65 aa10.31□□□□□ -0.76
GTF2IP1-204ENST00000616377 SPRR5A0A1B0GTR4 108 aa10.21□□□□□ -0.78
GTF2IP1-204ENST00000616377 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
GTF2IP1-204ENST00000616377 FAT4Q6V0I7 4981 aa10.16□□□□□ -0.78
GTF2IP1-204ENST00000616377 RNF213Q63HN8 5207 aa10.12□□□□□ -0.79
GTF2IP1-204ENST00000616377 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
GTF2IP1-204ENST00000616377 SPRR2GQ9BYE4 73 aa10.07□□□□□ -0.8
GTF2IP1-204ENST00000616377 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
GTF2IP1-204ENST00000616377 LCE3AQ5TA76 89 aa9.91□□□□□ -0.82
GTF2IP1-204ENST00000616377 M0R2T5 61 aa9.84□□□□□ -0.83
GTF2IP1-204ENST00000616377 MT1HP80294 61 aa9.76□□□□□ -0.85
GTF2IP1-204ENST00000616377 MT1FP04733 61 aa9.74□□□□□ -0.85
GTF2IP1-204ENST00000616377 KRTAP10-10P60014 251 aa9.7□□□□□ -0.86
GTF2IP1-204ENST00000616377 MT2AP02795 61 aa9.7□□□□□ -0.86
GTF2IP1-204ENST00000616377 KRTAP8-1Q8IUC2 63 aa9.62□□□□□ -0.87
GTF2IP1-204ENST00000616377 KRTAP9-8Q9BYQ0 159 aa9.6□□□□□ -0.87
GTF2IP1-204ENST00000616377 KRTAP19-8Q3LI54 63 aa9.55□□□□□ -0.88
GTF2IP1-204ENST00000616377 KRTAP10-5P60370 271 aa9.52□□□□□ -0.89
GTF2IP1-204ENST00000616377 MT1XP80297 61 aa9.49□□□□□ -0.89
GTF2IP1-204ENST00000616377 MT1BP07438 61 aa9.48□□□□□ -0.89
GTF2IP1-204ENST00000616377 KRTAP12-3P60328 96 aa9.39□□□□□ -0.91
GTF2IP1-204ENST00000616377 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
GTF2IP1-204ENST00000616377 KRTAP10-7P60409 375 aaPredicted RBP9.28□□□□□ -0.92
GTF2IP1-204ENST00000616377 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
GTF2IP1-204ENST00000616377 INE1O15225 51 aa9.17□□□□□ -0.94
GTF2IP1-204ENST00000616377 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
GTF2IP1-204ENST00000616377 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
GTF2IP1-204ENST00000616377 KRTAP19-5Q3LI72 72 aa8.93□□□□□ -0.98
GTF2IP1-204ENST00000616377 LCE3CQ5T5A8 94 aa8.86□□□□□ -0.99
GTF2IP1-204ENST00000616377 KMT2DO14686 5537 aa8.84□□□□□ -0.99
GTF2IP1-204ENST00000616377 USH2AO75445 5202 aa8.79□□□□□ -1
GTF2IP1-204ENST00000616377 LCE2BO14633 110 aa8.78□□□□□ -1
GTF2IP1-204ENST00000616377 KRTAP4-8A0A0G2JLE6 195 aa8.67□□□□□ -1.02
GTF2IP1-204ENST00000616377 KRTAP4-8Q9BYQ9 185 aa8.67□□□□□ -1.02
GTF2IP1-204ENST00000616377 KRTAP9-6A8MVA2 160 aa8.64□□□□□ -1.03
GTF2IP1-204ENST00000616377 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
GTF2IP1-204ENST00000616377 KRTAP4-7Q9BYR0 210 aa8.46□□□□□ -1.06
GTF2IP1-204ENST00000616377 KRTAP2-3P0C7H8 128 aa8.38□□□□□ -1.07
GTF2IP1-204ENST00000616377 KRTAP2-4Q9BYR9 128 aa8.38□□□□□ -1.07
GTF2IP1-204ENST00000616377 KRTAP2-1Q9BYU5 128 aa8.38□□□□□ -1.07
GTF2IP1-204ENST00000616377 FSIP2Q5CZC0 6907 aa8.34□□□□□ -1.08
GTF2IP1-204ENST00000616377 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
GTF2IP1-204ENST00000616377 MT1LQ93083 61 aa8.22□□□□□ -1.09
GTF2IP1-204ENST00000616377 MT1EP04732 61 aa8.17□□□□□ -1.1
GTF2IP1-204ENST00000616377 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
GTF2IP1-204ENST00000616377 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms