RNA–Protein interactions for RNA: ENST00000615637.2

FOXD1-202, Transcript of forkhead box D1, humanhuman

APPRIS P1 BASIC

Gene FOXD1, Length 2,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-202ENST00000615637 RYR3Q15413 4870 aa15.72■□□□□ 0.11
FOXD1-202ENST00000615637 TNXBP22105 4242 aa15.66■□□□□ 0.1
FOXD1-202ENST00000615637 KRTAP13-4Q3LI77 160 aa15.66■□□□□ 0.1
FOXD1-202ENST00000615637 ROMO1P60602 79 aa15.65■□□□□ 0.1
FOXD1-202ENST00000615637 HSPG2P98160 4391 aa15.64■□□□□ 0.09
FOXD1-202ENST00000615637 KRTAP3-2Q9BYR7 98 aa15.63■□□□□ 0.09
FOXD1-202ENST00000615637 RPL37P61927 97 aaKnown RBP15.63■□□□□ 0.09
FOXD1-202ENST00000615637 DMBT1Q9UGM3 2413 aaPredicted RBP15.61■□□□□ 0.09
FOXD1-202ENST00000615637 H3BS24 57 aa15.59■□□□□ 0.09
FOXD1-202ENST00000615637 LRP1Q07954 4544 aaKnown RBP15.59■□□□□ 0.09
FOXD1-202ENST00000615637 KRTAP10-8P60410 259 aa15.56■□□□□ 0.08
FOXD1-202ENST00000615637 A0A0D9SG42 100 aa15.52■□□□□ 0.07
FOXD1-202ENST00000615637 S4R3F8 94 aa15.52■□□□□ 0.07
FOXD1-202ENST00000615637 XP32Q5T750 250 aa15.47■□□□□ 0.07
FOXD1-202ENST00000615637 P0C880 135 aa15.38■□□□□ 0.05
FOXD1-202ENST00000615637 MYCBP2O75592 4640 aa15.35■□□□□ 0.05
FOXD1-202ENST00000615637 TPRXLQ17RH7 258 aa15.31■□□□□ 0.04
FOXD1-202ENST00000615637 Q5VSD8 79 aa15.24■□□□□ 0.03
FOXD1-202ENST00000615637 KRTAP12-2P59991 146 aa15.18■□□□□ 0.02
FOXD1-202ENST00000615637 EPPK1P58107 5090 aaKnown RBP15.14■□□□□ 0.01
FOXD1-202ENST00000615637 C10orf95Q9H7T3 257 aa15.14■□□□□ 0.01
FOXD1-202ENST00000615637 RYR1P21817 5038 aa15.12■□□□□ 0.01
FOXD1-202ENST00000615637 KRTAP12-1P59990 96 aa15.04■□□□□ -0
FOXD1-202ENST00000615637 KRTAP17-1Q9BYP8 105 aa15.01□□□□□ -0.01
FOXD1-202ENST00000615637 SPINT4Q6UDR6 99 aa15□□□□□ -0.01
FOXD1-202ENST00000615637 KIAA1109Q2LD37 5005 aa15□□□□□ -0.01
FOXD1-202ENST00000615637 LPAP08519 4548 aa14.98□□□□□ -0.01
FOXD1-202ENST00000615637 MT1HL1P0DM35 61 aa14.95□□□□□ -0.02
FOXD1-202ENST00000615637 M0QZ58 72 aa14.85□□□□□ -0.03
FOXD1-202ENST00000615637 LRP2P98164 4655 aa14.81□□□□□ -0.04
FOXD1-202ENST00000615637 KRTAP15-1Q3LI76 137 aa14.76□□□□□ -0.05
FOXD1-202ENST00000615637 KRTAP4-5Q9BYR2 181 aa14.59□□□□□ -0.07
FOXD1-202ENST00000615637 BIRC6Q9NR09 4857 aa14.54□□□□□ -0.08
FOXD1-202ENST00000615637 NDUFAF8A1L188 74 aa14.48□□□□□ -0.09
FOXD1-202ENST00000615637 R4GN34 69 aa14.4□□□□□ -0.1
FOXD1-202ENST00000615637 HERC2O95714 4834 aa14.37□□□□□ -0.11
FOXD1-202ENST00000615637 ABCA13Q86UQ4 5058 aa14.31□□□□□ -0.12
FOXD1-202ENST00000615637 LORP23490 312 aaPredicted RBP14.23□□□□□ -0.13
FOXD1-202ENST00000615637 MUC17Q685J3 4493 aa14.23□□□□□ -0.13
FOXD1-202ENST00000615637 SEC61BP60468 96 aaKnown RBP14.11□□□□□ -0.15
FOXD1-202ENST00000615637 J3QL48 77 aa14.04□□□□□ -0.16
FOXD1-202ENST00000615637 KRTAP4-1Q9BYQ7 146 aa14.04□□□□□ -0.16
FOXD1-202ENST00000615637 PLAC4Q8WY50 150 aa13.92□□□□□ -0.18
FOXD1-202ENST00000615637 KRTAP19-2Q3LHN2 52 aa13.88□□□□□ -0.19
FOXD1-202ENST00000615637 PCLOQ9Y6V0 5065 aa13.79□□□□□ -0.2
FOXD1-202ENST00000615637 CAMK2N1Q7Z7J9 78 aa13.71□□□□□ -0.21
FOXD1-202ENST00000615637 PP632Q6XCG6 107 aa13.7□□□□□ -0.22
FOXD1-202ENST00000615637 HERC1Q15751 4861 aa13.51□□□□□ -0.25
FOXD1-202ENST00000615637 FLGP20930 4061 aaPredicted RBP13.49□□□□□ -0.25
FOXD1-202ENST00000615637 MUC2Q02817 5179 aa13.37□□□□□ -0.27
FOXD1-202ENST00000615637 HMCN2Q8NDA2 5059 aa13.33□□□□□ -0.28
FOXD1-202ENST00000615637 LUZP6Q538Z0 58 aa13.32□□□□□ -0.28
FOXD1-202ENST00000615637 TNP1P09430 55 aa13.25□□□□□ -0.29
FOXD1-202ENST00000615637 KRTAP23-1A1A580 65 aa13.18□□□□□ -0.3
FOXD1-202ENST00000615637 SPRR5A0A1B0GTR4 108 aa12.98□□□□□ -0.33
FOXD1-202ENST00000615637 SPRR2GQ9BYE4 73 aa12.87□□□□□ -0.35
FOXD1-202ENST00000615637 LCE2CQ5TA81 110 aa12.86□□□□□ -0.35
FOXD1-202ENST00000615637 A0A0A0MQY5 61 aa12.86□□□□□ -0.35
FOXD1-202ENST00000615637 KRTAP19-1Q8IUB9 90 aa12.8□□□□□ -0.36
FOXD1-202ENST00000615637 FAT4Q6V0I7 4981 aa12.74□□□□□ -0.37
FOXD1-202ENST00000615637 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.37
FOXD1-202ENST00000615637 RNF213Q63HN8 5207 aa12.62□□□□□ -0.39
FOXD1-202ENST00000615637 LCE3AQ5TA76 89 aa12.56□□□□□ -0.4
FOXD1-202ENST00000615637 M0R2T5 61 aa12.49□□□□□ -0.41
FOXD1-202ENST00000615637 MT1HP80294 61 aa12.46□□□□□ -0.42
FOXD1-202ENST00000615637 MT1FP04733 61 aa12.4□□□□□ -0.42
FOXD1-202ENST00000615637 MT2AP02795 61 aa12.37□□□□□ -0.43
FOXD1-202ENST00000615637 KRTAP10-10P60014 251 aa12.34□□□□□ -0.43
FOXD1-202ENST00000615637 KRTAP9-8Q9BYQ0 159 aa12.25□□□□□ -0.45
FOXD1-202ENST00000615637 KRTAP8-1Q8IUC2 63 aa12.25□□□□□ -0.45
FOXD1-202ENST00000615637 KRTAP19-8Q3LI54 63 aa12.23□□□□□ -0.45
FOXD1-202ENST00000615637 KRTAP10-5P60370 271 aa12.11□□□□□ -0.47
FOXD1-202ENST00000615637 MT1BP07438 61 aa12.08□□□□□ -0.48
FOXD1-202ENST00000615637 MT1XP80297 61 aa12.08□□□□□ -0.48
FOXD1-202ENST00000615637 KRTAP10-12P60413 245 aa11.93□□□□□ -0.5
FOXD1-202ENST00000615637 KRTAP12-3P60328 96 aa11.93□□□□□ -0.5
FOXD1-202ENST00000615637 KRTAP10-7P60409 375 aaPredicted RBP11.77□□□□□ -0.52
FOXD1-202ENST00000615637 KRTAP9-3Q9BYQ3 159 aa11.71□□□□□ -0.54
FOXD1-202ENST00000615637 PRO2289Q9P1D8 64 aa11.69□□□□□ -0.54
FOXD1-202ENST00000615637 LCE2AQ5TA79 106 aaPredicted RBP11.66□□□□□ -0.54
FOXD1-202ENST00000615637 INE1O15225 51 aa11.62□□□□□ -0.55
FOXD1-202ENST00000615637 KRTAP19-5Q3LI72 72 aa11.33□□□□□ -0.6
FOXD1-202ENST00000615637 LCE3CQ5T5A8 94 aa11.26□□□□□ -0.61
FOXD1-202ENST00000615637 LCE2BO14633 110 aa11.19□□□□□ -0.62
FOXD1-202ENST00000615637 KMT2DO14686 5537 aa11.01□□□□□ -0.65
FOXD1-202ENST00000615637 USH2AO75445 5202 aa10.96□□□□□ -0.65
FOXD1-202ENST00000615637 KRTAP4-8A0A0G2JLE6 195 aa10.96□□□□□ -0.66
FOXD1-202ENST00000615637 KRTAP4-8Q9BYQ9 185 aa10.96□□□□□ -0.66
FOXD1-202ENST00000615637 KRTAP9-6A8MVA2 160 aa10.93□□□□□ -0.66
FOXD1-202ENST00000615637 KRTAP19-7Q3SYF9 63 aa10.77□□□□□ -0.69
FOXD1-202ENST00000615637 KRTAP2-3P0C7H8 128 aa10.66□□□□□ -0.7
FOXD1-202ENST00000615637 KRTAP2-4Q9BYR9 128 aa10.66□□□□□ -0.7
FOXD1-202ENST00000615637 KRTAP2-1Q9BYU5 128 aa10.66□□□□□ -0.7
FOXD1-202ENST00000615637 KRTAP4-7Q9BYR0 210 aa10.65□□□□□ -0.7
FOXD1-202ENST00000615637 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
FOXD1-202ENST00000615637 KRTAP9-2Q9BYQ4 174 aa10.5□□□□□ -0.73
FOXD1-202ENST00000615637 KRTAP19-4Q3LI73 84 aa10.48□□□□□ -0.73
FOXD1-202ENST00000615637 MT1LQ93083 61 aa10.47□□□□□ -0.73
FOXD1-202ENST00000615637 FSIP2Q5CZC0 6907 aa10.43□□□□□ -0.74
FOXD1-202ENST00000615637 MT1EP04732 61 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms