RNA–Protein interactions for RNA: ENST00000615573.4

PSD3-220, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 5 BASIC

Gene PSD3, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-220ENST00000615573 MT1HP80294 61 aa3.19□□□□□ -1.9
PSD3-220ENST00000615573 CELSR3Q9NYQ7 3312 aa3.18□□□□□ -1.9
PSD3-220ENST00000615573 FBN3Q75N90 2809 aa3.18□□□□□ -1.9
PSD3-220ENST00000615573 PRKDCP78527 4128 aaKnown RBP3.18□□□□□ -1.9
PSD3-220ENST00000615573 APOBP04114 4563 aaKnown RBP3.17□□□□□ -1.9
PSD3-220ENST00000615573 LCE2DQ5TA82 110 aaPredicted RBP3.17□□□□□ -1.9
PSD3-220ENST00000615573 LOC400499M0QZD8 3231 aa3.17□□□□□ -1.9
PSD3-220ENST00000615573 ZFHX4Q86UP3 3567 aa3.17□□□□□ -1.9
PSD3-220ENST00000615573 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
PSD3-220ENST00000615573 CRYBG3Q68DQ2 2970 aa3.16□□□□□ -1.9
PSD3-220ENST00000615573 FAT1Q14517 4588 aa3.14□□□□□ -1.91
PSD3-220ENST00000615573 CUBNO60494 3623 aa3.13□□□□□ -1.91
PSD3-220ENST00000615573 CFAP47Q6ZTR5 3102 aa3.12□□□□□ -1.91
PSD3-220ENST00000615573 PKD1L1Q8TDX9 2849 aa3.11□□□□□ -1.91
PSD3-220ENST00000615573 TGP01266 2768 aa3.1□□□□□ -1.91
PSD3-220ENST00000615573 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
PSD3-220ENST00000615573 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
PSD3-220ENST00000615573 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
PSD3-220ENST00000615573 ASPMQ8IZT6 3477 aa3.09□□□□□ -1.91
PSD3-220ENST00000615573 VPS13BQ7Z7G8 4022 aa3.09□□□□□ -1.91
PSD3-220ENST00000615573 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.92
PSD3-220ENST00000615573 MT2AP02795 61 aa3.08□□□□□ -1.92
PSD3-220ENST00000615573 SVEP1Q4LDE5 3571 aa3.08□□□□□ -1.92
PSD3-220ENST00000615573 INE1O15225 51 aa3.07□□□□□ -1.92
PSD3-220ENST00000615573 RYR2Q92736 4967 aa3.07□□□□□ -1.92
PSD3-220ENST00000615573 MEGF8Q7Z7M0 2845 aa3.06□□□□□ -1.92
PSD3-220ENST00000615573 DCHS1Q96JQ0 3298 aa3.06□□□□□ -1.92
PSD3-220ENST00000615573 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
PSD3-220ENST00000615573 RELNP78509 3460 aa3.06□□□□□ -1.92
PSD3-220ENST00000615573 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
PSD3-220ENST00000615573 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
PSD3-220ENST00000615573 SMG1Q96Q15 3661 aaKnown RBP3.02□□□□□ -1.93
PSD3-220ENST00000615573 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
PSD3-220ENST00000615573 VPS13CQ709C8 3753 aa3.01□□□□□ -1.93
PSD3-220ENST00000615573 DNHD1Q96M86 4753 aa3.01□□□□□ -1.93
PSD3-220ENST00000615573 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
PSD3-220ENST00000615573 LORP23490 312 aaPredicted RBP3.01□□□□□ -1.93
PSD3-220ENST00000615573 FAT3Q8TDW7 4589 aa2.99□□□□□ -1.93
PSD3-220ENST00000615573 PKHD1P08F94 4074 aa2.98□□□□□ -1.93
PSD3-220ENST00000615573 LAMA5O15230 3695 aa2.98□□□□□ -1.93
PSD3-220ENST00000615573 MT1FP04733 61 aa2.97□□□□□ -1.93
PSD3-220ENST00000615573 ZFHX3Q15911 3703 aa2.97□□□□□ -1.93
PSD3-220ENST00000615573 KMT2AQ03164 3969 aa2.96□□□□□ -1.94
PSD3-220ENST00000615573 RYR1P21817 5038 aa2.96□□□□□ -1.94
PSD3-220ENST00000615573 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
PSD3-220ENST00000615573 ZNF469Q96JG9 3925 aaPredicted RBP2.95□□□□□ -1.94
PSD3-220ENST00000615573 CSMD1Q96PZ7 3565 aa2.93□□□□□ -1.94
PSD3-220ENST00000615573 RYR3Q15413 4870 aa2.92□□□□□ -1.94
PSD3-220ENST00000615573 PKD1P98161 4303 aa2.91□□□□□ -1.94
PSD3-220ENST00000615573 LCE2AQ5TA79 106 aaPredicted RBP2.9□□□□□ -1.94
PSD3-220ENST00000615573 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
PSD3-220ENST00000615573 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
PSD3-220ENST00000615573 TNXBP22105 4242 aa2.86□□□□□ -1.95
PSD3-220ENST00000615573 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
PSD3-220ENST00000615573 CSMD2Q7Z408 3487 aa2.83□□□□□ -1.96
PSD3-220ENST00000615573 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
PSD3-220ENST00000615573 KRTAP9-8Q9BYQ0 159 aa2.82□□□□□ -1.96
PSD3-220ENST00000615573 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
PSD3-220ENST00000615573 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
PSD3-220ENST00000615573 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
PSD3-220ENST00000615573 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
PSD3-220ENST00000615573 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
PSD3-220ENST00000615573 MT1BP07438 61 aa2.77□□□□□ -1.97
PSD3-220ENST00000615573 LYSTQ99698 3801 aa2.76□□□□□ -1.97
PSD3-220ENST00000615573 MT1XP80297 61 aa2.76□□□□□ -1.97
PSD3-220ENST00000615573 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
PSD3-220ENST00000615573 LCE2BO14633 110 aa2.74□□□□□ -1.97
PSD3-220ENST00000615573 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
PSD3-220ENST00000615573 CRCT1Q9UGL9 99 aa2.73□□□□□ -1.97
PSD3-220ENST00000615573 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
PSD3-220ENST00000615573 PCLOQ9Y6V0 5065 aa2.7□□□□□ -1.98
PSD3-220ENST00000615573 HERC2O95714 4834 aa2.7□□□□□ -1.98
PSD3-220ENST00000615573 SPRR2EP22531 72 aa2.69□□□□□ -1.98
PSD3-220ENST00000615573 SPRR2BP35325 72 aa2.69□□□□□ -1.98
PSD3-220ENST00000615573 SPRR2AP35326 72 aa2.69□□□□□ -1.98
PSD3-220ENST00000615573 MT1GP13640 62 aa2.68□□□□□ -1.98
PSD3-220ENST00000615573 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
PSD3-220ENST00000615573 HYDINQ4G0P3 5121 aa2.67□□□□□ -1.98
PSD3-220ENST00000615573 COL7A1Q02388 2944 aa2.66□□□□□ -1.98
PSD3-220ENST00000615573 SPRR2DP22532 72 aa2.64□□□□□ -1.99
PSD3-220ENST00000615573 LRP2P98164 4655 aa2.63□□□□□ -1.99
PSD3-220ENST00000615573 SRRM2Q9UQ35 2752 aaKnown RBP2.61□□□□□ -1.99
PSD3-220ENST00000615573 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
PSD3-220ENST00000615573 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
PSD3-220ENST00000615573 CSMD3Q7Z407 3707 aa2.57□□□□□ -2
PSD3-220ENST00000615573 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
PSD3-220ENST00000615573 KRTAP12-4P60329 112 aa2.55□□□□□ -2
PSD3-220ENST00000615573 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
PSD3-220ENST00000615573 MT1EP04732 61 aa2.54□□□□□ -2
PSD3-220ENST00000615573 MT1LQ93083 61 aa2.53□□□□□ -2
PSD3-220ENST00000615573 KRTAP9-2Q9BYQ4 174 aa2.51□□□□□ -2.01
PSD3-220ENST00000615573 KRTAP9-6A0A140TA67 174 aa2.45□□□□□ -2.02
PSD3-220ENST00000615573 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
PSD3-220ENST00000615573 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
PSD3-220ENST00000615573 MT1MQ8N339 61 aa2.42□□□□□ -2.02
PSD3-220ENST00000615573 KRTAP4-8A0A0G2JLE6 195 aa2.41□□□□□ -2.02
PSD3-220ENST00000615573 KRTAP4-8Q9BYQ9 185 aa2.41□□□□□ -2.02
PSD3-220ENST00000615573 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
PSD3-220ENST00000615573 LCE3BQ5TA77 95 aa2.37□□□□□ -2.03
PSD3-220ENST00000615573 LPAP08519 4548 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms