RNA–Protein interactions for RNA: ENST00000613302.4

RUNX1T1-248, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-248ENST00000613302 ALMS1Q8TCU4 4167 aa3.89□□□□□ -1.79
RUNX1T1-248ENST00000613302 AKAP9Q99996 3911 aa3.87□□□□□ -1.79
RUNX1T1-248ENST00000613302 ZNF469Q96JG9 3925 aaPredicted RBP3.82□□□□□ -1.8
RUNX1T1-248ENST00000613302 SPRR2EP22531 72 aa3.79□□□□□ -1.8
RUNX1T1-248ENST00000613302 SPRR2BP35325 72 aa3.79□□□□□ -1.8
RUNX1T1-248ENST00000613302 SPRR2AP35326 72 aa3.79□□□□□ -1.8
RUNX1T1-248ENST00000613302 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
RUNX1T1-248ENST00000613302 MT1HP80294 61 aa3.73□□□□□ -1.81
RUNX1T1-248ENST00000613302 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
RUNX1T1-248ENST00000613302 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.81
RUNX1T1-248ENST00000613302 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
RUNX1T1-248ENST00000613302 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
RUNX1T1-248ENST00000613302 SPRR2DP22532 72 aa3.64□□□□□ -1.83
RUNX1T1-248ENST00000613302 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
RUNX1T1-248ENST00000613302 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
RUNX1T1-248ENST00000613302 DNAH9Q9NYC9 4486 aa3.6□□□□□ -1.83
RUNX1T1-248ENST00000613302 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.84
RUNX1T1-248ENST00000613302 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
RUNX1T1-248ENST00000613302 MT2AP02795 61 aa3.57□□□□□ -1.84
RUNX1T1-248ENST00000613302 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
RUNX1T1-248ENST00000613302 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
RUNX1T1-248ENST00000613302 FRAS1Q86XX4 4008 aa3.55□□□□□ -1.84
RUNX1T1-248ENST00000613302 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
RUNX1T1-248ENST00000613302 MT1FP04733 61 aa3.53□□□□□ -1.84
RUNX1T1-248ENST00000613302 ANK2Q01484 3957 aa3.53□□□□□ -1.84
RUNX1T1-248ENST00000613302 LYSTQ99698 3801 aa3.53□□□□□ -1.84
RUNX1T1-248ENST00000613302 LCE2BO14633 110 aa3.51□□□□□ -1.85
RUNX1T1-248ENST00000613302 KRTAP17-1Q9BYP8 105 aa3.49□□□□□ -1.85
RUNX1T1-248ENST00000613302 DNAH10Q8IVF4 4471 aa3.47□□□□□ -1.85
RUNX1T1-248ENST00000613302 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
RUNX1T1-248ENST00000613302 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
RUNX1T1-248ENST00000613302 CMYA5Q8N3K9 4069 aa3.43□□□□□ -1.86
RUNX1T1-248ENST00000613302 MT4P47944 62 aa3.41□□□□□ -1.86
RUNX1T1-248ENST00000613302 DNAH5Q8TE73 4624 aa3.41□□□□□ -1.86
RUNX1T1-248ENST00000613302 MT1GP13640 62 aa3.41□□□□□ -1.86
RUNX1T1-248ENST00000613302 DNAH3Q8TD57 4116 aa3.39□□□□□ -1.87
RUNX1T1-248ENST00000613302 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
RUNX1T1-248ENST00000613302 LCE2CQ5TA81 110 aa3.38□□□□□ -1.87
RUNX1T1-248ENST00000613302 DNAH7Q8WXX0 4024 aa3.37□□□□□ -1.87
RUNX1T1-248ENST00000613302 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
RUNX1T1-248ENST00000613302 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
RUNX1T1-248ENST00000613302 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
RUNX1T1-248ENST00000613302 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
RUNX1T1-248ENST00000613302 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.87
RUNX1T1-248ENST00000613302 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
RUNX1T1-248ENST00000613302 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.88
RUNX1T1-248ENST00000613302 DNAH11Q96DT5 4516 aa3.33□□□□□ -1.88
RUNX1T1-248ENST00000613302 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
RUNX1T1-248ENST00000613302 LRP1BQ9NZR2 4599 aa3.31□□□□□ -1.88
RUNX1T1-248ENST00000613302 SPRR2GQ9BYE4 73 aa3.3□□□□□ -1.88
RUNX1T1-248ENST00000613302 FAT1Q14517 4588 aa3.3□□□□□ -1.88
RUNX1T1-248ENST00000613302 KRTAP4-8A0A0G2JLE6 195 aa3.29□□□□□ -1.88
RUNX1T1-248ENST00000613302 KRTAP4-8Q9BYQ9 185 aa3.29□□□□□ -1.88
RUNX1T1-248ENST00000613302 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
RUNX1T1-248ENST00000613302 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
RUNX1T1-248ENST00000613302 DYNC2H1Q8NCM8 4307 aaKnown RBP3.23□□□□□ -1.89
RUNX1T1-248ENST00000613302 DNHD1Q96M86 4753 aa3.22□□□□□ -1.89
RUNX1T1-248ENST00000613302 SACSQ9NZJ4 4579 aa3.21□□□□□ -1.89
RUNX1T1-248ENST00000613302 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
RUNX1T1-248ENST00000613302 LPAP08519 4548 aa3.19□□□□□ -1.9
RUNX1T1-248ENST00000613302 VPS13DQ5THJ4 4388 aa3.19□□□□□ -1.9
RUNX1T1-248ENST00000613302 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
RUNX1T1-248ENST00000613302 PKHD1P08F94 4074 aa3.16□□□□□ -1.9
RUNX1T1-248ENST00000613302 RYR1P21817 5038 aa3.14□□□□□ -1.91
RUNX1T1-248ENST00000613302 APOBP04114 4563 aaKnown RBP3.13□□□□□ -1.91
RUNX1T1-248ENST00000613302 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
RUNX1T1-248ENST00000613302 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
RUNX1T1-248ENST00000613302 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
RUNX1T1-248ENST00000613302 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
RUNX1T1-248ENST00000613302 MT1XP80297 61 aa3.08□□□□□ -1.92
RUNX1T1-248ENST00000613302 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
RUNX1T1-248ENST00000613302 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
RUNX1T1-248ENST00000613302 HECTD4Q9Y4D8 3996 aa3.07□□□□□ -1.92
RUNX1T1-248ENST00000613302 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
RUNX1T1-248ENST00000613302 HSPG2P98160 4391 aa3.05□□□□□ -1.92
RUNX1T1-248ENST00000613302 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
RUNX1T1-248ENST00000613302 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.93
RUNX1T1-248ENST00000613302 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
RUNX1T1-248ENST00000613302 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
RUNX1T1-248ENST00000613302 PKD1P98161 4303 aa3.01□□□□□ -1.93
RUNX1T1-248ENST00000613302 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
RUNX1T1-248ENST00000613302 MT1BP07438 61 aa3□□□□□ -1.93
RUNX1T1-248ENST00000613302 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
RUNX1T1-248ENST00000613302 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
RUNX1T1-248ENST00000613302 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
RUNX1T1-248ENST00000613302 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP9-3Q9BYQ3 159 aa2.96□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
RUNX1T1-248ENST00000613302 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
RUNX1T1-248ENST00000613302 RYR3Q15413 4870 aa2.92□□□□□ -1.94
RUNX1T1-248ENST00000613302 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
RUNX1T1-248ENST00000613302 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
RUNX1T1-248ENST00000613302 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
RUNX1T1-248ENST00000613302 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
RUNX1T1-248ENST00000613302 TNXBP22105 4242 aa2.87□□□□□ -1.95
RUNX1T1-248ENST00000613302 MT3P25713 68 aa2.82□□□□□ -1.96
RUNX1T1-248ENST00000613302 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms