RNA–Protein interactions for RNA: ENST00000613048.4

FGFR2-224, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5 BASIC

Gene FGFR2, Length 4,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-224ENST00000613048 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
FGFR2-224ENST00000613048 DNAH17Q9UFH2 4485 aa9.81□□□□□ -0.84
FGFR2-224ENST00000613048 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
FGFR2-224ENST00000613048 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
FGFR2-224ENST00000613048 DYNC1H1Q14204 4646 aaKnown RBP9.76□□□□□ -0.85
FGFR2-224ENST00000613048 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
FGFR2-224ENST00000613048 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.86
FGFR2-224ENST00000613048 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
FGFR2-224ENST00000613048 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
FGFR2-224ENST00000613048 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
FGFR2-224ENST00000613048 LYSTQ99698 3801 aa9.68□□□□□ -0.86
FGFR2-224ENST00000613048 A0A0A0MQY5 61 aa9.66□□□□□ -0.86
FGFR2-224ENST00000613048 PP632Q6XCG6 107 aa9.59□□□□□ -0.87
FGFR2-224ENST00000613048 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
FGFR2-224ENST00000613048 DNAH3Q8TD57 4116 aa9.57□□□□□ -0.88
FGFR2-224ENST00000613048 RYR1P21817 5038 aa9.55□□□□□ -0.88
FGFR2-224ENST00000613048 CMYA5Q8N3K9 4069 aa9.53□□□□□ -0.88
FGFR2-224ENST00000613048 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
FGFR2-224ENST00000613048 MYCBP2O75592 4640 aa9.47□□□□□ -0.89
FGFR2-224ENST00000613048 DYNC2H1Q8NCM8 4307 aaKnown RBP9.43□□□□□ -0.9
FGFR2-224ENST00000613048 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
FGFR2-224ENST00000613048 SACSQ9NZJ4 4579 aa9.4□□□□□ -0.9
FGFR2-224ENST00000613048 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.91
FGFR2-224ENST00000613048 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
FGFR2-224ENST00000613048 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
FGFR2-224ENST00000613048 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
FGFR2-224ENST00000613048 RYR3Q15413 4870 aa9.29□□□□□ -0.92
FGFR2-224ENST00000613048 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
FGFR2-224ENST00000613048 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
FGFR2-224ENST00000613048 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
FGFR2-224ENST00000613048 HYDINQ4G0P3 5121 aa9.21□□□□□ -0.93
FGFR2-224ENST00000613048 HECTD4Q9Y4D8 3996 aa9.21□□□□□ -0.94
FGFR2-224ENST00000613048 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
FGFR2-224ENST00000613048 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
FGFR2-224ENST00000613048 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
FGFR2-224ENST00000613048 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
FGFR2-224ENST00000613048 PKHD1P08F94 4074 aa9.08□□□□□ -0.96
FGFR2-224ENST00000613048 RYR2Q92736 4967 aa8.99□□□□□ -0.97
FGFR2-224ENST00000613048 KMT2CQ8NEZ4 4911 aaKnown RBP8.89□□□□□ -0.99
FGFR2-224ENST00000613048 LRP2P98164 4655 aa8.84□□□□□ -0.99
FGFR2-224ENST00000613048 HERC2O95714 4834 aa8.79□□□□□ -1
FGFR2-224ENST00000613048 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
FGFR2-224ENST00000613048 PKD1P98161 4303 aa8.67□□□□□ -1.02
FGFR2-224ENST00000613048 HSPG2P98160 4391 aa8.65□□□□□ -1.02
FGFR2-224ENST00000613048 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
FGFR2-224ENST00000613048 MT1HP80294 61 aa8.56□□□□□ -1.04
FGFR2-224ENST00000613048 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
FGFR2-224ENST00000613048 MT2AP02795 61 aa8.46□□□□□ -1.06
FGFR2-224ENST00000613048 LPAP08519 4548 aa8.43□□□□□ -1.06
FGFR2-224ENST00000613048 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
FGFR2-224ENST00000613048 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
FGFR2-224ENST00000613048 MT1FP04733 61 aa8.38□□□□□ -1.07
FGFR2-224ENST00000613048 BIRC6Q9NR09 4857 aa8.35□□□□□ -1.07
FGFR2-224ENST00000613048 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
FGFR2-224ENST00000613048 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
FGFR2-224ENST00000613048 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
FGFR2-224ENST00000613048 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
FGFR2-224ENST00000613048 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
FGFR2-224ENST00000613048 TNXBP22105 4242 aa8.15□□□□□ -1.11
FGFR2-224ENST00000613048 HERC1Q15751 4861 aa8.15□□□□□ -1.11
FGFR2-224ENST00000613048 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
FGFR2-224ENST00000613048 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
FGFR2-224ENST00000613048 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
FGFR2-224ENST00000613048 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
FGFR2-224ENST00000613048 KRTAP19-2Q3LHN2 52 aa7.89□□□□□ -1.15
FGFR2-224ENST00000613048 KRTAP8-1Q8IUC2 63 aa7.86□□□□□ -1.15
FGFR2-224ENST00000613048 KRTAP19-8Q3LI54 63 aa7.85□□□□□ -1.15
FGFR2-224ENST00000613048 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
FGFR2-224ENST00000613048 MUC2Q02817 5179 aa7.8□□□□□ -1.16
FGFR2-224ENST00000613048 KRTAP10-7P60409 375 aaPredicted RBP7.78□□□□□ -1.16
FGFR2-224ENST00000613048 MT1BP07438 61 aa7.77□□□□□ -1.17
FGFR2-224ENST00000613048 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
FGFR2-224ENST00000613048 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
FGFR2-224ENST00000613048 MT1XP80297 61 aa7.73□□□□□ -1.17
FGFR2-224ENST00000613048 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
FGFR2-224ENST00000613048 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
FGFR2-224ENST00000613048 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
FGFR2-224ENST00000613048 INE1O15225 51 aa7.66□□□□□ -1.18
FGFR2-224ENST00000613048 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
FGFR2-224ENST00000613048 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
FGFR2-224ENST00000613048 FSIP2Q5CZC0 6907 aa7.61□□□□□ -1.19
FGFR2-224ENST00000613048 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
FGFR2-224ENST00000613048 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
FGFR2-224ENST00000613048 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
FGFR2-224ENST00000613048 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
FGFR2-224ENST00000613048 SPRR2FQ96RM1 72 aa7.43□□□□□ -1.22
FGFR2-224ENST00000613048 LCE2BO14633 110 aa7.41□□□□□ -1.22
FGFR2-224ENST00000613048 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
FGFR2-224ENST00000613048 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
FGFR2-224ENST00000613048 SYNE1Q8NF91 8797 aaKnown RBP7.02□□□□□ -1.28
FGFR2-224ENST00000613048 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
FGFR2-224ENST00000613048 MT1GP13640 62 aa7□□□□□ -1.29
FGFR2-224ENST00000613048 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
FGFR2-224ENST00000613048 MT1LQ93083 61 aa6.85□□□□□ -1.31
FGFR2-224ENST00000613048 MT1EP04732 61 aa6.85□□□□□ -1.31
FGFR2-224ENST00000613048 SPRR2EP22531 72 aa6.82□□□□□ -1.32
FGFR2-224ENST00000613048 SPRR2BP35325 72 aa6.82□□□□□ -1.32
FGFR2-224ENST00000613048 SPRR2AP35326 72 aa6.82□□□□□ -1.32
FGFR2-224ENST00000613048 USH2AO75445 5202 aa6.8□□□□□ -1.32
FGFR2-224ENST00000613048 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms