RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
TSKU-205ENST00000612930 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
TSKU-205ENST00000612930 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
TSKU-205ENST00000612930 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
TSKU-205ENST00000612930 NDUFAF8A1L188 74 aa8.46□□□□□ -1.06
TSKU-205ENST00000612930 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
TSKU-205ENST00000612930 S4R3F8 94 aa8.42□□□□□ -1.06
TSKU-205ENST00000612930 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
TSKU-205ENST00000612930 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
TSKU-205ENST00000612930 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
TSKU-205ENST00000612930 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
TSKU-205ENST00000612930 FAT1Q14517 4588 aa8.35□□□□□ -1.07
TSKU-205ENST00000612930 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
TSKU-205ENST00000612930 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
TSKU-205ENST00000612930 XP32Q5T750 250 aa8.25□□□□□ -1.09
TSKU-205ENST00000612930 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
TSKU-205ENST00000612930 LRP1Q07954 4544 aaKnown RBP8.24□□□□□ -1.09
TSKU-205ENST00000612930 HSPG2P98160 4391 aa8.23□□□□□ -1.09
TSKU-205ENST00000612930 A0A0A0MQY5 61 aa8.19□□□□□ -1.1
TSKU-205ENST00000612930 TNXBP22105 4242 aa8.14□□□□□ -1.11
TSKU-205ENST00000612930 A0A1B0GVY2 172 aa8.1□□□□□ -1.11
TSKU-205ENST00000612930 M0QZ58 72 aa8.06□□□□□ -1.12
TSKU-205ENST00000612930 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
TSKU-205ENST00000612930 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
TSKU-205ENST00000612930 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
TSKU-205ENST00000612930 LPAP08519 4548 aa7.9□□□□□ -1.14
TSKU-205ENST00000612930 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
TSKU-205ENST00000612930 R4GN34 69 aa7.79□□□□□ -1.16
TSKU-205ENST00000612930 Q5VSD8 79 aa7.77□□□□□ -1.16
TSKU-205ENST00000612930 RYR2Q92736 4967 aa7.77□□□□□ -1.17
TSKU-205ENST00000612930 RYR3Q15413 4870 aa7.75□□□□□ -1.17
TSKU-205ENST00000612930 LRP2P98164 4655 aa7.74□□□□□ -1.17
TSKU-205ENST00000612930 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
TSKU-205ENST00000612930 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.17
TSKU-205ENST00000612930 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
TSKU-205ENST00000612930 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
TSKU-205ENST00000612930 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
TSKU-205ENST00000612930 RYR1P21817 5038 aa7.53□□□□□ -1.2
TSKU-205ENST00000612930 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
TSKU-205ENST00000612930 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
TSKU-205ENST00000612930 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
TSKU-205ENST00000612930 KIAA1109Q2LD37 5005 aa7.38□□□□□ -1.23
TSKU-205ENST00000612930 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
TSKU-205ENST00000612930 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
TSKU-205ENST00000612930 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
TSKU-205ENST00000612930 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
TSKU-205ENST00000612930 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
TSKU-205ENST00000612930 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
TSKU-205ENST00000612930 TNP1P09430 55 aa7.22□□□□□ -1.25
TSKU-205ENST00000612930 LCE2BO14633 110 aa7.21□□□□□ -1.25
TSKU-205ENST00000612930 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.26
TSKU-205ENST00000612930 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
TSKU-205ENST00000612930 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
TSKU-205ENST00000612930 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
TSKU-205ENST00000612930 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
TSKU-205ENST00000612930 HERC2O95714 4834 aa6.96□□□□□ -1.29
TSKU-205ENST00000612930 HERC1Q15751 4861 aa6.94□□□□□ -1.3
TSKU-205ENST00000612930 PCLOQ9Y6V0 5065 aa6.92□□□□□ -1.3
TSKU-205ENST00000612930 MUC2Q02817 5179 aa6.91□□□□□ -1.3
TSKU-205ENST00000612930 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
TSKU-205ENST00000612930 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
TSKU-205ENST00000612930 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
TSKU-205ENST00000612930 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
TSKU-205ENST00000612930 INE1O15225 51 aa6.72□□□□□ -1.33
TSKU-205ENST00000612930 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
TSKU-205ENST00000612930 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
TSKU-205ENST00000612930 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
TSKU-205ENST00000612930 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
TSKU-205ENST00000612930 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
TSKU-205ENST00000612930 MT1FP04733 61 aa6.45□□□□□ -1.38
TSKU-205ENST00000612930 M0R2T5 61 aa6.43□□□□□ -1.38
TSKU-205ENST00000612930 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
TSKU-205ENST00000612930 MT2AP02795 61 aa6.42□□□□□ -1.38
TSKU-205ENST00000612930 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
TSKU-205ENST00000612930 MT1XP80297 61 aa6.4□□□□□ -1.38
TSKU-205ENST00000612930 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
TSKU-205ENST00000612930 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
TSKU-205ENST00000612930 MT1HP80294 61 aa6.38□□□□□ -1.39
TSKU-205ENST00000612930 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
TSKU-205ENST00000612930 MT1BP07438 61 aa6.34□□□□□ -1.39
TSKU-205ENST00000612930 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
TSKU-205ENST00000612930 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
TSKU-205ENST00000612930 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
TSKU-205ENST00000612930 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
TSKU-205ENST00000612930 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
TSKU-205ENST00000612930 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
TSKU-205ENST00000612930 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
TSKU-205ENST00000612930 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
TSKU-205ENST00000612930 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
TSKU-205ENST00000612930 KMT2DO14686 5537 aa5.84□□□□□ -1.47
TSKU-205ENST00000612930 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
TSKU-205ENST00000612930 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
TSKU-205ENST00000612930 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
TSKU-205ENST00000612930 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
TSKU-205ENST00000612930 USH2AO75445 5202 aa5.66□□□□□ -1.5
TSKU-205ENST00000612930 MT1LQ93083 61 aa5.56□□□□□ -1.52
TSKU-205ENST00000612930 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
TSKU-205ENST00000612930 MT1EP04732 61 aa5.49□□□□□ -1.53
TSKU-205ENST00000612930 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
TSKU-205ENST00000612930 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms