RNA–Protein interactions for RNA: ENST00000612484.4

HUWE1-214, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene HUWE1, Length 14,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-214ENST00000612484 CSMD1Q96PZ7 3565 aa2.28□□□□□ -2.05
HUWE1-214ENST00000612484 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
HUWE1-214ENST00000612484 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
HUWE1-214ENST00000612484 KMT2AQ03164 3969 aa2.22□□□□□ -2.05
HUWE1-214ENST00000612484 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
HUWE1-214ENST00000612484 CSMD3Q7Z407 3707 aa2.22□□□□□ -2.05
HUWE1-214ENST00000612484 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
HUWE1-214ENST00000612484 CUBNO60494 3623 aa2.2□□□□□ -2.06
HUWE1-214ENST00000612484 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
HUWE1-214ENST00000612484 HUWE1Q7Z6Z7 4374 aaKnown RBP2.2□□□□□ -2.06
HUWE1-214ENST00000612484 ANK3Q12955 4377 aaKnown RBP2.19□□□□□ -2.06
HUWE1-214ENST00000612484 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
HUWE1-214ENST00000612484 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
HUWE1-214ENST00000612484 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
HUWE1-214ENST00000612484 DNAH10Q8IVF4 4471 aa2.16□□□□□ -2.06
HUWE1-214ENST00000612484 MUC3AQ02505 3323 aa2.16□□□□□ -2.06
HUWE1-214ENST00000612484 PRKDCP78527 4128 aaKnown RBP2.15□□□□□ -2.06
HUWE1-214ENST00000612484 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
HUWE1-214ENST00000612484 KRTAP10-5P60370 271 aa2.14□□□□□ -2.07
HUWE1-214ENST00000612484 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
HUWE1-214ENST00000612484 VPS13BQ7Z7G8 4022 aa2.13□□□□□ -2.07
HUWE1-214ENST00000612484 CSMD2Q7Z408 3487 aa2.12□□□□□ -2.07
HUWE1-214ENST00000612484 SVEP1Q4LDE5 3571 aa2.12□□□□□ -2.07
HUWE1-214ENST00000612484 RYR1P21817 5038 aa2.11□□□□□ -2.07
HUWE1-214ENST00000612484 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
HUWE1-214ENST00000612484 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
HUWE1-214ENST00000612484 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
HUWE1-214ENST00000612484 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
HUWE1-214ENST00000612484 KRTAP10-7P60409 375 aaPredicted RBP2.02□□□□□ -2.09
HUWE1-214ENST00000612484 DYNC1H1Q14204 4646 aaKnown RBP2.01□□□□□ -2.09
HUWE1-214ENST00000612484 DNAH8Q96JB1 4490 aa2.01□□□□□ -2.09
HUWE1-214ENST00000612484 DNAH5Q8TE73 4624 aa2□□□□□ -2.09
HUWE1-214ENST00000612484 SPRR2GQ9BYE4 73 aa1.99□□□□□ -2.09
HUWE1-214ENST00000612484 KRTAP10-4P60372 401 aaPredicted RBP1.97□□□□□ -2.09
HUWE1-214ENST00000612484 DNAH9Q9NYC9 4486 aa1.97□□□□□ -2.09
HUWE1-214ENST00000612484 RYR3Q15413 4870 aa1.96□□□□□ -2.09
HUWE1-214ENST00000612484 PKHD1P08F94 4074 aa1.96□□□□□ -2.09
HUWE1-214ENST00000612484 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
HUWE1-214ENST00000612484 LORP23490 312 aaPredicted RBP1.96□□□□□ -2.1
HUWE1-214ENST00000612484 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
HUWE1-214ENST00000612484 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
HUWE1-214ENST00000612484 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
HUWE1-214ENST00000612484 BIRC6Q9NR09 4857 aa1.94□□□□□ -2.1
HUWE1-214ENST00000612484 HYDINQ4G0P3 5121 aa1.94□□□□□ -2.1
HUWE1-214ENST00000612484 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
HUWE1-214ENST00000612484 FAT3Q8TDW7 4589 aa1.92□□□□□ -2.1
HUWE1-214ENST00000612484 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
HUWE1-214ENST00000612484 RYR2Q92736 4967 aa1.9□□□□□ -2.11
HUWE1-214ENST00000612484 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
HUWE1-214ENST00000612484 PKD1P98161 4303 aa1.89□□□□□ -2.11
HUWE1-214ENST00000612484 MT1HL1P0DM35 61 aa1.89□□□□□ -2.11
HUWE1-214ENST00000612484 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
HUWE1-214ENST00000612484 LRP1Q07954 4544 aaKnown RBP1.88□□□□□ -2.11
HUWE1-214ENST00000612484 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
HUWE1-214ENST00000612484 EPPK1P58107 5090 aaKnown RBP1.86□□□□□ -2.11
HUWE1-214ENST00000612484 TNXBP22105 4242 aa1.86□□□□□ -2.11
HUWE1-214ENST00000612484 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
HUWE1-214ENST00000612484 MYCBP2O75592 4640 aa1.84□□□□□ -2.11
HUWE1-214ENST00000612484 HSPG2P98160 4391 aa1.84□□□□□ -2.12
HUWE1-214ENST00000612484 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.12
HUWE1-214ENST00000612484 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.12
HUWE1-214ENST00000612484 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.12
HUWE1-214ENST00000612484 FAT1Q14517 4588 aa1.83□□□□□ -2.12
HUWE1-214ENST00000612484 HERC1Q15751 4861 aa1.81□□□□□ -2.12
HUWE1-214ENST00000612484 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
HUWE1-214ENST00000612484 LRP1BQ9NZR2 4599 aa1.8□□□□□ -2.12
HUWE1-214ENST00000612484 LCE2CQ5TA81 110 aa1.8□□□□□ -2.12
HUWE1-214ENST00000612484 LCE3BQ5TA77 95 aa1.79□□□□□ -2.12
HUWE1-214ENST00000612484 PRM1P04553 51 aa1.79□□□□□ -2.12
HUWE1-214ENST00000612484 SPRR2EP22531 72 aa1.79□□□□□ -2.12
HUWE1-214ENST00000612484 SPRR2BP35325 72 aa1.79□□□□□ -2.12
HUWE1-214ENST00000612484 SPRR2AP35326 72 aa1.79□□□□□ -2.12
HUWE1-214ENST00000612484 STARD9Q9P2P6 4700 aa1.78□□□□□ -2.12
HUWE1-214ENST00000612484 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.13
HUWE1-214ENST00000612484 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
HUWE1-214ENST00000612484 SPRR2DP22532 72 aa1.76□□□□□ -2.13
HUWE1-214ENST00000612484 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
HUWE1-214ENST00000612484 MT1HP80294 61 aa1.74□□□□□ -2.13
HUWE1-214ENST00000612484 LCE2BO14633 110 aa1.74□□□□□ -2.13
HUWE1-214ENST00000612484 HERC2O95714 4834 aa1.74□□□□□ -2.13
HUWE1-214ENST00000612484 LRP2P98164 4655 aa1.74□□□□□ -2.13
HUWE1-214ENST00000612484 KRTAP4-5Q9BYR2 181 aa1.73□□□□□ -2.13
HUWE1-214ENST00000612484 MT1LQ93083 61 aa1.72□□□□□ -2.13
HUWE1-214ENST00000612484 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
HUWE1-214ENST00000612484 MT1AP04731 61 aa1.7□□□□□ -2.14
HUWE1-214ENST00000612484 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
HUWE1-214ENST00000612484 MT1XP80297 61 aa1.69□□□□□ -2.14
HUWE1-214ENST00000612484 MT2AP02795 61 aa1.69□□□□□ -2.14
HUWE1-214ENST00000612484 MT1EP04732 61 aa1.68□□□□□ -2.14
HUWE1-214ENST00000612484 LCE2AQ5TA79 106 aaPredicted RBP1.68□□□□□ -2.14
HUWE1-214ENST00000612484 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
HUWE1-214ENST00000612484 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
HUWE1-214ENST00000612484 MT1GP13640 62 aa1.66□□□□□ -2.14
HUWE1-214ENST00000612484 MT1FP04733 61 aa1.64□□□□□ -2.15
HUWE1-214ENST00000612484 LCE2DQ5TA82 110 aaPredicted RBP1.63□□□□□ -2.15
HUWE1-214ENST00000612484 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
HUWE1-214ENST00000612484 KRTAP9-6A0A140TA67 174 aa1.59□□□□□ -2.15
HUWE1-214ENST00000612484 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
HUWE1-214ENST00000612484 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
HUWE1-214ENST00000612484 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms