RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
UBE2F-223ENST00000612130 P0C880 135 aa7.03□□□□□ -1.28
UBE2F-223ENST00000612130 A0A0D9SG42 100 aa7.01□□□□□ -1.29
UBE2F-223ENST00000612130 S4R3F8 94 aa7.01□□□□□ -1.29
UBE2F-223ENST00000612130 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
UBE2F-223ENST00000612130 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
UBE2F-223ENST00000612130 FAT1Q14517 4588 aa6.97□□□□□ -1.29
UBE2F-223ENST00000612130 RYR3Q15413 4870 aa6.97□□□□□ -1.29
UBE2F-223ENST00000612130 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
UBE2F-223ENST00000612130 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
UBE2F-223ENST00000612130 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
UBE2F-223ENST00000612130 XP32Q5T750 250 aa6.9□□□□□ -1.3
UBE2F-223ENST00000612130 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
UBE2F-223ENST00000612130 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
UBE2F-223ENST00000612130 DMBT1Q9UGM3 2413 aaPredicted RBP6.86□□□□□ -1.31
UBE2F-223ENST00000612130 RYR2Q92736 4967 aa6.85□□□□□ -1.31
UBE2F-223ENST00000612130 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
UBE2F-223ENST00000612130 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
UBE2F-223ENST00000612130 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
UBE2F-223ENST00000612130 TNXBP22105 4242 aa6.83□□□□□ -1.32
UBE2F-223ENST00000612130 M0QZ58 72 aa6.77□□□□□ -1.33
UBE2F-223ENST00000612130 HSPG2P98160 4391 aa6.76□□□□□ -1.33
UBE2F-223ENST00000612130 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
UBE2F-223ENST00000612130 NDUFAF8A1L188 74 aa6.71□□□□□ -1.33
UBE2F-223ENST00000612130 Q5VSD8 79 aa6.71□□□□□ -1.34
UBE2F-223ENST00000612130 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
UBE2F-223ENST00000612130 MYCBP2O75592 4640 aa6.59□□□□□ -1.35
UBE2F-223ENST00000612130 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
UBE2F-223ENST00000612130 R4GN34 69 aa6.5□□□□□ -1.37
UBE2F-223ENST00000612130 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
UBE2F-223ENST00000612130 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
UBE2F-223ENST00000612130 LPAP08519 4548 aa6.45□□□□□ -1.38
UBE2F-223ENST00000612130 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
UBE2F-223ENST00000612130 RYR1P21817 5038 aa6.45□□□□□ -1.38
UBE2F-223ENST00000612130 HERC2O95714 4834 aa6.42□□□□□ -1.38
UBE2F-223ENST00000612130 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
UBE2F-223ENST00000612130 LRP2P98164 4655 aa6.4□□□□□ -1.38
UBE2F-223ENST00000612130 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
UBE2F-223ENST00000612130 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
UBE2F-223ENST00000612130 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
UBE2F-223ENST00000612130 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
UBE2F-223ENST00000612130 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
UBE2F-223ENST00000612130 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
UBE2F-223ENST00000612130 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
UBE2F-223ENST00000612130 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
UBE2F-223ENST00000612130 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
UBE2F-223ENST00000612130 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
UBE2F-223ENST00000612130 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
UBE2F-223ENST00000612130 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
UBE2F-223ENST00000612130 HERC1Q15751 4861 aa6.03□□□□□ -1.44
UBE2F-223ENST00000612130 J3QL48 77 aa6.03□□□□□ -1.44
UBE2F-223ENST00000612130 TNP1P09430 55 aa6.03□□□□□ -1.44
UBE2F-223ENST00000612130 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
UBE2F-223ENST00000612130 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
UBE2F-223ENST00000612130 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
UBE2F-223ENST00000612130 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
UBE2F-223ENST00000612130 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
UBE2F-223ENST00000612130 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
UBE2F-223ENST00000612130 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
UBE2F-223ENST00000612130 MUC2Q02817 5179 aa5.66□□□□□ -1.5
UBE2F-223ENST00000612130 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
UBE2F-223ENST00000612130 LCE2CQ5TA81 110 aa5.65□□□□□ -1.51
UBE2F-223ENST00000612130 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
UBE2F-223ENST00000612130 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
UBE2F-223ENST00000612130 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
UBE2F-223ENST00000612130 M0R2T5 61 aa5.5□□□□□ -1.53
UBE2F-223ENST00000612130 INE1O15225 51 aa5.48□□□□□ -1.53
UBE2F-223ENST00000612130 MT1HP80294 61 aa5.47□□□□□ -1.53
UBE2F-223ENST00000612130 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
UBE2F-223ENST00000612130 MT2AP02795 61 aa5.47□□□□□ -1.53
UBE2F-223ENST00000612130 MT1FP04733 61 aa5.47□□□□□ -1.53
UBE2F-223ENST00000612130 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
UBE2F-223ENST00000612130 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
UBE2F-223ENST00000612130 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
UBE2F-223ENST00000612130 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
UBE2F-223ENST00000612130 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
UBE2F-223ENST00000612130 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
UBE2F-223ENST00000612130 MT1XP80297 61 aa5.38□□□□□ -1.55
UBE2F-223ENST00000612130 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
UBE2F-223ENST00000612130 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
UBE2F-223ENST00000612130 MT1BP07438 61 aa5.36□□□□□ -1.55
UBE2F-223ENST00000612130 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
UBE2F-223ENST00000612130 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.58
UBE2F-223ENST00000612130 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
UBE2F-223ENST00000612130 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
UBE2F-223ENST00000612130 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
UBE2F-223ENST00000612130 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
UBE2F-223ENST00000612130 LCE2BO14633 110 aa5.01□□□□□ -1.61
UBE2F-223ENST00000612130 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
UBE2F-223ENST00000612130 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
UBE2F-223ENST00000612130 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
UBE2F-223ENST00000612130 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
UBE2F-223ENST00000612130 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
UBE2F-223ENST00000612130 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
UBE2F-223ENST00000612130 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
UBE2F-223ENST00000612130 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
UBE2F-223ENST00000612130 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
UBE2F-223ENST00000612130 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
UBE2F-223ENST00000612130 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
UBE2F-223ENST00000612130 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms