RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	ANK2	Q01484	3957 aa		6.62	□□□□□ -1.35
MUC1-223	ENST00000611571	LYST	Q99698	3801 aa		6.61	□□□□□ -1.35
MUC1-223	ENST00000611571	KRTAP10-10	P60014	251 aa		6.61	□□□□□ -1.35
MUC1-223	ENST00000611571	MYCBP2	O75592	4640 aa		6.58	□□□□□ -1.36
MUC1-223	ENST00000611571	LRP1B	Q9NZR2	4599 aa		6.58	□□□□□ -1.36
MUC1-223	ENST00000611571	KRTAP10-4	P60372	401 aa	Predicted RBP	6.58	□□□□□ -1.36
MUC1-223	ENST00000611571	MT1HL1	P0DM35	61 aa		6.54	□□□□□ -1.36
MUC1-223	ENST00000611571	KMT2A	Q03164	3969 aa		6.53	□□□□□ -1.36
MUC1-223	ENST00000611571	PRKDC	P78527	4128 aa	Known RBP	6.52	□□□□□ -1.36
MUC1-223	ENST00000611571	KRTAP4-5	Q9BYR2	181 aa		6.47	□□□□□ -1.37
MUC1-223	ENST00000611571	VPS13D	Q5THJ4	4388 aa		6.43	□□□□□ -1.38
MUC1-223	ENST00000611571	DNAH2	Q9P225	4427 aa		6.41	□□□□□ -1.38
MUC1-223	ENST00000611571	DYNC1H1	Q14204	4646 aa	Known RBP	6.4	□□□□□ -1.38
MUC1-223	ENST00000611571	DNAH17	Q9UFH2	4485 aa		6.39	□□□□□ -1.39
MUC1-223	ENST00000611571	FRAS1	Q86XX4	4008 aa		6.38	□□□□□ -1.39
MUC1-223	ENST00000611571	RYR1	P21817	5038 aa		6.37	□□□□□ -1.39
MUC1-223	ENST00000611571	FAT3	Q8TDW7	4589 aa		6.35	□□□□□ -1.39
MUC1-223	ENST00000611571	LOR	P23490	312 aa	Predicted RBP	6.34	□□□□□ -1.39
MUC1-223	ENST00000611571	KRTAP15-1	Q3LI76	137 aa		6.32	□□□□□ -1.4
MUC1-223	ENST00000611571	KIAA1109	Q2LD37	5005 aa		6.31	□□□□□ -1.4
MUC1-223	ENST00000611571	VPS13B	Q7Z7G8	4022 aa		6.29	□□□□□ -1.4
MUC1-223	ENST00000611571	DNAH7	Q8WXX0	4024 aa		6.28	□□□□□ -1.4
MUC1-223	ENST00000611571	DNAH6	Q9C0G6	4158 aa		6.26	□□□□□ -1.41
MUC1-223	ENST00000611571	LRP1	Q07954	4544 aa	Known RBP	6.25	□□□□□ -1.41
MUC1-223	ENST00000611571	SACS	Q9NZJ4	4579 aa		6.25	□□□□□ -1.41
MUC1-223	ENST00000611571	APOB	P04114	4563 aa	Known RBP	6.21	□□□□□ -1.42
MUC1-223	ENST00000611571	CMYA5	Q8N3K9	4069 aa		6.18	□□□□□ -1.42
MUC1-223	ENST00000611571	PRO2289	Q9P1D8	64 aa		6.13	□□□□□ -1.43
MUC1-223	ENST00000611571	DNAH3	Q8TD57	4116 aa		6.13	□□□□□ -1.43
MUC1-223	ENST00000611571	RYR3	Q15413	4870 aa		6.09	□□□□□ -1.43
MUC1-223	ENST00000611571	HECTD4	Q9Y4D8	3996 aa		6.08	□□□□□ -1.44
MUC1-223	ENST00000611571	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.07	□□□□□ -1.44
MUC1-223	ENST00000611571	KRTAP4-1	Q9BYQ7	146 aa		6.06	□□□□□ -1.44
MUC1-223	ENST00000611571	HYDIN	Q4G0P3	5121 aa		6.05	□□□□□ -1.44
MUC1-223	ENST00000611571	ALMS1	Q8TCU4	4167 aa		6.03	□□□□□ -1.44
MUC1-223	ENST00000611571	PKHD1	P08F94	4074 aa		6.03	□□□□□ -1.44
MUC1-223	ENST00000611571	LRP2	P98164	4655 aa		6.03	□□□□□ -1.44
MUC1-223	ENST00000611571	FAT2	Q9NYQ8	4349 aa		6	□□□□□ -1.45
MUC1-223	ENST00000611571	KRTAP17-1	Q9BYP8	105 aa		5.95	□□□□□ -1.46
MUC1-223	ENST00000611571	LCE3A	Q5TA76	89 aa		5.89	□□□□□ -1.47
MUC1-223	ENST00000611571	KRTAP10-12	P60413	245 aa		5.84	□□□□□ -1.48
MUC1-223	ENST00000611571	KRTAP12-3	P60328	96 aa		5.79	□□□□□ -1.48
MUC1-223	ENST00000611571	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.79	□□□□□ -1.48
MUC1-223	ENST00000611571	HERC2	O95714	4834 aa		5.73	□□□□□ -1.49
MUC1-223	ENST00000611571	RYR2	Q92736	4967 aa		5.71	□□□□□ -1.5
MUC1-223	ENST00000611571	CRCT1	Q9UGL9	99 aa		5.7	□□□□□ -1.5
MUC1-223	ENST00000611571	LPA	P08519	4548 aa		5.69	□□□□□ -1.5
MUC1-223	ENST00000611571	HSPG2	P98160	4391 aa		5.66	□□□□□ -1.5
MUC1-223	ENST00000611571	EPPK1	P58107	5090 aa	Known RBP	5.6	□□□□□ -1.51
MUC1-223	ENST00000611571	PCLO	Q9Y6V0	5065 aa		5.58	□□□□□ -1.52
MUC1-223	ENST00000611571	PKD1	P98161	4303 aa		5.58	□□□□□ -1.52
MUC1-223	ENST00000611571	KRTAP23-1	A1A580	65 aa		5.57	□□□□□ -1.52
MUC1-223	ENST00000611571	MT1H	P80294	61 aa		5.57	□□□□□ -1.52
MUC1-223	ENST00000611571	MT2A	P02795	61 aa		5.56	□□□□□ -1.52
MUC1-223	ENST00000611571	MT1F	P04733	61 aa		5.54	□□□□□ -1.52
MUC1-223	ENST00000611571	INE1	O15225	51 aa		5.51	□□□□□ -1.53
MUC1-223	ENST00000611571	SPRR2G	Q9BYE4	73 aa		5.5	□□□□□ -1.53
MUC1-223	ENST00000611571	MUC2	Q02817	5179 aa		5.43	□□□□□ -1.54
MUC1-223	ENST00000611571	KRTAP19-1	Q8IUB9	90 aa		5.42	□□□□□ -1.54
MUC1-223	ENST00000611571	FSIP2	Q5CZC0	6907 aa		5.38	□□□□□ -1.55
MUC1-223	ENST00000611571	ABCA13	Q86UQ4	5058 aa		5.36	□□□□□ -1.55
MUC1-223	ENST00000611571	RNF213	Q63HN8	5207 aa		5.33	□□□□□ -1.56
MUC1-223	ENST00000611571	PKHD1L1	Q86WI1	4243 aa		5.32	□□□□□ -1.56
MUC1-223	ENST00000611571	UBR4	Q5T4S7	5183 aa		5.3	□□□□□ -1.56
MUC1-223	ENST00000611571	KRTAP19-5	Q3LI72	72 aa		5.29	□□□□□ -1.56
MUC1-223	ENST00000611571	KRTAP8-1	Q8IUC2	63 aa		5.29	□□□□□ -1.56
MUC1-223	ENST00000611571	FAT4	Q6V0I7	4981 aa		5.29	□□□□□ -1.56
MUC1-223	ENST00000611571	KRTAP10-7	P60409	375 aa	Predicted RBP	5.28	□□□□□ -1.56
MUC1-223	ENST00000611571	TNXB	P22105	4242 aa		5.27	□□□□□ -1.57
MUC1-223	ENST00000611571	KRTAP10-5	P60370	271 aa		5.26	□□□□□ -1.57
MUC1-223	ENST00000611571	OBSCN	Q5VST9	7968 aa		5.24	□□□□□ -1.57
MUC1-223	ENST00000611571	HERC1	Q15751	4861 aa		5.24	□□□□□ -1.57
MUC1-223	ENST00000611571	SYNE1	Q8NF91	8797 aa	Known RBP	5.2	□□□□□ -1.58
MUC1-223	ENST00000611571	MUC17	Q685J3	4493 aa		5.2	□□□□□ -1.58
MUC1-223	ENST00000611571	LCE2C	Q5TA81	110 aa		5.19	□□□□□ -1.58
MUC1-223	ENST00000611571	MT1X	P80297	61 aa		5.17	□□□□□ -1.58
MUC1-223	ENST00000611571	BIRC6	Q9NR09	4857 aa		5.17	□□□□□ -1.58
MUC1-223	ENST00000611571	KRTAP9-8	Q9BYQ0	159 aa		5.14	□□□□□ -1.59
MUC1-223	ENST00000611571	MT1B	P07438	61 aa		5.14	□□□□□ -1.59
MUC1-223	ENST00000611571	LCE3C	Q5T5A8	94 aa		5.13	□□□□□ -1.59
MUC1-223	ENST00000611571	KRTAP19-2	Q3LHN2	52 aa		5.13	□□□□□ -1.59
MUC1-223	ENST00000611571	KRTAP4-8	A0A0G2JLE6	195 aa		5.12	□□□□□ -1.59
MUC1-223	ENST00000611571	KRTAP4-8	Q9BYQ9	185 aa		5.12	□□□□□ -1.59
MUC1-223	ENST00000611571	KRTAP19-8	Q3LI54	63 aa		5.11	□□□□□ -1.59
MUC1-223	ENST00000611571	FLG	P20930	4061 aa	Predicted RBP	5.05	□□□□□ -1.6
MUC1-223	ENST00000611571	SPRR5	A0A1B0GTR4	108 aa		5.03	□□□□□ -1.6
MUC1-223	ENST00000611571	HMCN2	Q8NDA2	5059 aa		4.99	□□□□□ -1.61
MUC1-223	ENST00000611571	KRTAP9-3	Q9BYQ3	159 aa		4.94	□□□□□ -1.62
MUC1-223	ENST00000611571	KRTAP4-7	Q9BYR0	210 aa		4.94	□□□□□ -1.62
MUC1-223	ENST00000611571	SPRR2F	Q96RM1	72 aa		4.92	□□□□□ -1.62
MUC1-223	ENST00000611571	LCE2B	O14633	110 aa		4.83	□□□□□ -1.64
MUC1-223	ENST00000611571	DST	Q03001	7570 aa	Known RBP	4.83	□□□□□ -1.64
MUC1-223	ENST00000611571	MT1G	P13640	62 aa		4.82	□□□□□ -1.64
MUC1-223	ENST00000611571	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.77	□□□□□ -1.65
MUC1-223	ENST00000611571	USH2A	O75445	5202 aa		4.77	□□□□□ -1.65
MUC1-223	ENST00000611571	LCE3B	Q5TA77	95 aa		4.74	□□□□□ -1.65
MUC1-223	ENST00000611571	KRTAP12-4	P60329	112 aa		4.71	□□□□□ -1.66
MUC1-223	ENST00000611571	KMT2D	O14686	5537 aa		4.69	□□□□□ -1.66
MUC1-223	ENST00000611571	MT1L	Q93083	61 aa		4.59	□□□□□ -1.68
MUC1-223	ENST00000611571	KRTAP4-3	Q9BYR4	195 aa		4.59	□□□□□ -1.68

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