RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.33
VPS36-207ENST00000611132 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
VPS36-207ENST00000611132 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
VPS36-207ENST00000611132 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
VPS36-207ENST00000611132 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
VPS36-207ENST00000611132 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
VPS36-207ENST00000611132 STARD9Q9P2P6 4700 aa6.57□□□□□ -1.36
VPS36-207ENST00000611132 LRP1BQ9NZR2 4599 aa6.54□□□□□ -1.36
VPS36-207ENST00000611132 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
VPS36-207ENST00000611132 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
VPS36-207ENST00000611132 ANK2Q01484 3957 aa6.46□□□□□ -1.37
VPS36-207ENST00000611132 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
VPS36-207ENST00000611132 FAT1Q14517 4588 aa6.4□□□□□ -1.38
VPS36-207ENST00000611132 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
VPS36-207ENST00000611132 FRAS1Q86XX4 4008 aa6.39□□□□□ -1.39
VPS36-207ENST00000611132 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
VPS36-207ENST00000611132 INE1O15225 51 aa6.35□□□□□ -1.39
VPS36-207ENST00000611132 DYNC2H1Q8NCM8 4307 aaKnown RBP6.35□□□□□ -1.39
VPS36-207ENST00000611132 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.39
VPS36-207ENST00000611132 LYSTQ99698 3801 aa6.33□□□□□ -1.4
VPS36-207ENST00000611132 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
VPS36-207ENST00000611132 PRKDCP78527 4128 aaKnown RBP6.3□□□□□ -1.4
VPS36-207ENST00000611132 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
VPS36-207ENST00000611132 CMYA5Q8N3K9 4069 aa6.26□□□□□ -1.41
VPS36-207ENST00000611132 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
VPS36-207ENST00000611132 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
VPS36-207ENST00000611132 DNAH7Q8WXX0 4024 aa6.2□□□□□ -1.42
VPS36-207ENST00000611132 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
VPS36-207ENST00000611132 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
VPS36-207ENST00000611132 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
VPS36-207ENST00000611132 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
VPS36-207ENST00000611132 KRTAP10-12P60413 245 aa6.15□□□□□ -1.43
VPS36-207ENST00000611132 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
VPS36-207ENST00000611132 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
VPS36-207ENST00000611132 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
VPS36-207ENST00000611132 RYR1P21817 5038 aa6□□□□□ -1.45
VPS36-207ENST00000611132 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
VPS36-207ENST00000611132 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
VPS36-207ENST00000611132 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
VPS36-207ENST00000611132 KIAA1109Q2LD37 5005 aa5.85□□□□□ -1.47
VPS36-207ENST00000611132 HYDINQ4G0P3 5121 aa5.85□□□□□ -1.47
VPS36-207ENST00000611132 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
VPS36-207ENST00000611132 PKHD1P08F94 4074 aa5.79□□□□□ -1.48
VPS36-207ENST00000611132 LRP2P98164 4655 aa5.77□□□□□ -1.49
VPS36-207ENST00000611132 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
VPS36-207ENST00000611132 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
VPS36-207ENST00000611132 RYR3Q15413 4870 aa5.72□□□□□ -1.49
VPS36-207ENST00000611132 MT2AP02795 61 aa5.72□□□□□ -1.49
VPS36-207ENST00000611132 PKD1P98161 4303 aa5.72□□□□□ -1.49
VPS36-207ENST00000611132 RYR2Q92736 4967 aa5.7□□□□□ -1.5
VPS36-207ENST00000611132 MT1HP80294 61 aa5.7□□□□□ -1.5
VPS36-207ENST00000611132 MT1FP04733 61 aa5.65□□□□□ -1.5
VPS36-207ENST00000611132 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
VPS36-207ENST00000611132 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
VPS36-207ENST00000611132 HSPG2P98160 4391 aa5.61□□□□□ -1.51
VPS36-207ENST00000611132 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
VPS36-207ENST00000611132 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
VPS36-207ENST00000611132 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
VPS36-207ENST00000611132 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
VPS36-207ENST00000611132 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
VPS36-207ENST00000611132 TNXBP22105 4242 aa5.48□□□□□ -1.53
VPS36-207ENST00000611132 LPAP08519 4548 aa5.44□□□□□ -1.54
VPS36-207ENST00000611132 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
VPS36-207ENST00000611132 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
VPS36-207ENST00000611132 MT1XP80297 61 aa5.41□□□□□ -1.54
VPS36-207ENST00000611132 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
VPS36-207ENST00000611132 MT1BP07438 61 aa5.35□□□□□ -1.55
VPS36-207ENST00000611132 LCE2CQ5TA81 110 aa5.34□□□□□ -1.56
VPS36-207ENST00000611132 HERC2O95714 4834 aa5.34□□□□□ -1.56
VPS36-207ENST00000611132 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
VPS36-207ENST00000611132 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
VPS36-207ENST00000611132 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
VPS36-207ENST00000611132 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
VPS36-207ENST00000611132 HERC1Q15751 4861 aa5.12□□□□□ -1.59
VPS36-207ENST00000611132 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
VPS36-207ENST00000611132 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
VPS36-207ENST00000611132 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
VPS36-207ENST00000611132 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
VPS36-207ENST00000611132 ABCA13Q86UQ4 5058 aa4.99□□□□□ -1.61
VPS36-207ENST00000611132 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
VPS36-207ENST00000611132 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.61
VPS36-207ENST00000611132 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
VPS36-207ENST00000611132 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
VPS36-207ENST00000611132 HMCN2Q8NDA2 5059 aa4.89□□□□□ -1.63
VPS36-207ENST00000611132 MT1GP13640 62 aa4.88□□□□□ -1.63
VPS36-207ENST00000611132 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
VPS36-207ENST00000611132 LCE2BO14633 110 aa4.85□□□□□ -1.63
VPS36-207ENST00000611132 MT1LQ93083 61 aa4.84□□□□□ -1.63
VPS36-207ENST00000611132 MUC2Q02817 5179 aa4.82□□□□□ -1.64
VPS36-207ENST00000611132 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
VPS36-207ENST00000611132 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
VPS36-207ENST00000611132 MT1EP04732 61 aa4.78□□□□□ -1.64
VPS36-207ENST00000611132 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
VPS36-207ENST00000611132 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
VPS36-207ENST00000611132 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
VPS36-207ENST00000611132 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
VPS36-207ENST00000611132 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
VPS36-207ENST00000611132 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
VPS36-207ENST00000611132 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
VPS36-207ENST00000611132 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms