RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 TRIOO75962 3097 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 Q9Y3F1 56 aa0.94□□□□□ -2.26
LINC00343-211ENST00000608426 FAT3Q8TDW7 4589 aa0.94□□□□□ -2.26
LINC00343-211ENST00000608426 LRBAP50851 2863 aa0.94□□□□□ -2.26
LINC00343-211ENST00000608426 STAB1Q9NY15 2570 aa0.93□□□□□ -2.26
LINC00343-211ENST00000608426 BOD1L1Q8NFC6 3051 aa0.93□□□□□ -2.26
LINC00343-211ENST00000608426 MAP1BP46821 2468 aaKnown RBP0.93□□□□□ -2.26
LINC00343-211ENST00000608426 DNAH12Q6ZR08 3092 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 CSMD1Q96PZ7 3565 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 CEP250Q9BV73 2442 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 DEFB133Q30KQ1 61 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 RIF1Q5UIP0 2472 aaKnown RBP0.92□□□□□ -2.26
LINC00343-211ENST00000608426 DNAH1Q9P2D7 4330 aa0.92□□□□□ -2.26
LINC00343-211ENST00000608426 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
LINC00343-211ENST00000608426 KALRNO60229 2985 aa0.91□□□□□ -2.26
LINC00343-211ENST00000608426 EPG5Q9HCE0 2579 aa0.91□□□□□ -2.26
LINC00343-211ENST00000608426 DMDP11532 3685 aa0.91□□□□□ -2.26
LINC00343-211ENST00000608426 FAM186AA6NE01 2351 aa0.91□□□□□ -2.26
LINC00343-211ENST00000608426 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
LINC00343-211ENST00000608426 NSD1Q96L73 2696 aaPredicted RBP0.91□□□□□ -2.26
LINC00343-211ENST00000608426 ZANQ9Y493 2812 aa0.9□□□□□ -2.27
LINC00343-211ENST00000608426 PTPN13Q12923 2485 aa0.9□□□□□ -2.27
LINC00343-211ENST00000608426 SETXQ7Z333 2677 aaKnown RBP0.9□□□□□ -2.27
LINC00343-211ENST00000608426 NBEAL2Q6ZNJ1 2754 aa0.9□□□□□ -2.27
LINC00343-211ENST00000608426 ACANP16112 2415 aa0.89□□□□□ -2.27
LINC00343-211ENST00000608426 MTORP42345 2549 aa0.89□□□□□ -2.27
LINC00343-211ENST00000608426 HTTP42858 3142 aa0.89□□□□□ -2.27
LINC00343-211ENST00000608426 DCHS1Q96JQ0 3298 aa0.89□□□□□ -2.27
LINC00343-211ENST00000608426 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
LINC00343-211ENST00000608426 RPS29P62273 56 aaKnown RBP0.88□□□□□ -2.27
LINC00343-211ENST00000608426 MAST4O15021 2626 aa0.88□□□□□ -2.27
LINC00343-211ENST00000608426 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
LINC00343-211ENST00000608426 PLECQ15149 4684 aaKnown RBP0.88□□□□□ -2.27
LINC00343-211ENST00000608426 DNAH9Q9NYC9 4486 aa0.87□□□□□ -2.27
LINC00343-211ENST00000608426 NIPBLQ6KC79 2804 aaeCLIP0.86□□□□□ -2.27
LINC00343-211ENST00000608426 HIVEP1P15822 2718 aa0.86□□□□□ -2.27
LINC00343-211ENST00000608426 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
LINC00343-211ENST00000608426 ANKRD11Q6UB99 2663 aaPredicted RBP0.86□□□□□ -2.27
LINC00343-211ENST00000608426 PKHD1P08F94 4074 aa0.86□□□□□ -2.27
LINC00343-211ENST00000608426 SVEP1Q4LDE5 3571 aa0.86□□□□□ -2.27
LINC00343-211ENST00000608426 MUC3AQ02505 3323 aa0.86□□□□□ -2.27
LINC00343-211ENST00000608426 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
LINC00343-211ENST00000608426 FAT1Q14517 4588 aa0.85□□□□□ -2.27
LINC00343-211ENST00000608426 TRRAPQ9Y4A5 3859 aa0.85□□□□□ -2.27
LINC00343-211ENST00000608426 FREM2Q5SZK8 3169 aa0.85□□□□□ -2.27
LINC00343-211ENST00000608426 XIRP2A4UGR9 3374 aa0.85□□□□□ -2.27
LINC00343-211ENST00000608426 ITPR1Q14643 2758 aa0.85□□□□□ -2.27
LINC00343-211ENST00000608426 FLNBO75369 2602 aaKnown RBP0.85□□□□□ -2.27
LINC00343-211ENST00000608426 ACACBO00763 2458 aa0.84□□□□□ -2.27
LINC00343-211ENST00000608426 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
LINC00343-211ENST00000608426 USP9XQ93008 2570 aaPredicted RBP0.84□□□□□ -2.27
LINC00343-211ENST00000608426 SPRR2DP22532 72 aa0.84□□□□□ -2.27
LINC00343-211ENST00000608426 DNAH5Q8TE73 4624 aa0.84□□□□□ -2.28
LINC00343-211ENST00000608426 CSMD2Q7Z408 3487 aa0.84□□□□□ -2.28
LINC00343-211ENST00000608426 LAMA3Q16787 3333 aa0.84□□□□□ -2.28
LINC00343-211ENST00000608426 CMYA5Q8N3K9 4069 aa0.84□□□□□ -2.28
LINC00343-211ENST00000608426 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
LINC00343-211ENST00000608426 NCOR2Q9Y618 2525 aa0.83□□□□□ -2.28
LINC00343-211ENST00000608426 PCLOQ9Y6V0 5065 aa0.83□□□□□ -2.28
LINC00343-211ENST00000608426 MXRA5Q9NR99 2828 aa0.83□□□□□ -2.28
LINC00343-211ENST00000608426 TEP1Q99973 2627 aaKnown RBP0.83□□□□□ -2.28
LINC00343-211ENST00000608426 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
LINC00343-211ENST00000608426 HRNRQ86YZ3 2850 aaPredicted RBP0.82□□□□□ -2.28
LINC00343-211ENST00000608426 PCNTO95613 3336 aa0.82□□□□□ -2.28
LINC00343-211ENST00000608426 LPAP08519 4548 aa0.82□□□□□ -2.28
LINC00343-211ENST00000608426 MT1AP04731 61 aa0.82□□□□□ -2.28
LINC00343-211ENST00000608426 ANKHD1Q8IWZ3 2542 aaKnown RBP0.82□□□□□ -2.28
LINC00343-211ENST00000608426 ADGRG4Q8IZF6 3080 aa0.81□□□□□ -2.28
LINC00343-211ENST00000608426 CFAP47Q6ZTR5 3102 aa0.81□□□□□ -2.28
LINC00343-211ENST00000608426 SPRR2BP35325 72 aa0.81□□□□□ -2.28
LINC00343-211ENST00000608426 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
LINC00343-211ENST00000608426 WDFY4Q6ZS81 3184 aa0.81□□□□□ -2.28
LINC00343-211ENST00000608426 DNAH17Q9UFH2 4485 aa0.81□□□□□ -2.28
LINC00343-211ENST00000608426 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
LINC00343-211ENST00000608426 GPR98Q8WXG9 6306 aa0.79□□□□□ -2.28
LINC00343-211ENST00000608426 CD52P31358 61 aa0.79□□□□□ -2.28
LINC00343-211ENST00000608426 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
LINC00343-211ENST00000608426 LOC400499M0QZD8 3231 aa0.79□□□□□ -2.28
LINC00343-211ENST00000608426 SPEGQ15772 3267 aa0.79□□□□□ -2.28
LINC00343-211ENST00000608426 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
LINC00343-211ENST00000608426 DYNC1H1Q14204 4646 aaKnown RBP0.78□□□□□ -2.28
LINC00343-211ENST00000608426 MYO18BQ8IUG5 2567 aa0.78□□□□□ -2.28
LINC00343-211ENST00000608426 VPS13CQ709C8 3753 aa0.78□□□□□ -2.29
LINC00343-211ENST00000608426 VPS13AQ96RL7 3174 aa0.78□□□□□ -2.29
LINC00343-211ENST00000608426 LAMA2P24043 3122 aaKnown RBP0.77□□□□□ -2.29
LINC00343-211ENST00000608426 CFAP46Q8IYW2 2715 aa0.77□□□□□ -2.29
LINC00343-211ENST00000608426 ZFYVE26Q68DK2 2539 aa0.76□□□□□ -2.29
LINC00343-211ENST00000608426 SPRR2AP35326 72 aa0.76□□□□□ -2.29
LINC00343-211ENST00000608426 TGP01266 2768 aa0.76□□□□□ -2.29
LINC00343-211ENST00000608426 TLN2Q9Y4G6 2542 aa0.76□□□□□ -2.29
LINC00343-211ENST00000608426 TEX15Q9BXT5 2789 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 HTN3P15516 51 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 ITPR2Q14571 2701 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 LRP1BQ9NZR2 4599 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
LINC00343-211ENST00000608426 UTRNP46939 3433 aa0.74□□□□□ -2.29
LINC00343-211ENST00000608426 FLNAP21333 2647 aaKnown RBP0.74□□□□□ -2.29
LINC00343-211ENST00000608426 LAMA1P25391 3075 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms