RNA–Protein interactions for RNA: ENST00000607941.5

SYT6-202, Transcript of synaptotagmin 6, humanhuman

TSL 2 BASIC

Gene SYT6, Length 4,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-202ENST00000607941 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
SYT6-202ENST00000607941 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
SYT6-202ENST00000607941 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
SYT6-202ENST00000607941 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
SYT6-202ENST00000607941 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
SYT6-202ENST00000607941 KRTAP3-3Q9BYR6 98 aa4.77□□□□□ -1.65
SYT6-202ENST00000607941 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
SYT6-202ENST00000607941 DNAH2Q9P225 4427 aa4.75□□□□□ -1.65
SYT6-202ENST00000607941 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
SYT6-202ENST00000607941 MT1HL1P0DM35 61 aa4.74□□□□□ -1.65
SYT6-202ENST00000607941 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
SYT6-202ENST00000607941 TNP1P09430 55 aa4.73□□□□□ -1.65
SYT6-202ENST00000607941 DNAH6Q9C0G6 4158 aa4.73□□□□□ -1.65
SYT6-202ENST00000607941 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
SYT6-202ENST00000607941 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
SYT6-202ENST00000607941 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
SYT6-202ENST00000607941 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
SYT6-202ENST00000607941 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
SYT6-202ENST00000607941 RYR1P21817 5038 aa4.66□□□□□ -1.66
SYT6-202ENST00000607941 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
SYT6-202ENST00000607941 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.66
SYT6-202ENST00000607941 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
SYT6-202ENST00000607941 SACSQ9NZJ4 4579 aa4.61□□□□□ -1.67
SYT6-202ENST00000607941 DNAH3Q8TD57 4116 aa4.61□□□□□ -1.67
SYT6-202ENST00000607941 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
SYT6-202ENST00000607941 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
SYT6-202ENST00000607941 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
SYT6-202ENST00000607941 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
SYT6-202ENST00000607941 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
SYT6-202ENST00000607941 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
SYT6-202ENST00000607941 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
SYT6-202ENST00000607941 RYR3Q15413 4870 aa4.51□□□□□ -1.69
SYT6-202ENST00000607941 FAT2Q9NYQ8 4349 aa4.46□□□□□ -1.69
SYT6-202ENST00000607941 ALMS1Q8TCU4 4167 aa4.46□□□□□ -1.7
SYT6-202ENST00000607941 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
SYT6-202ENST00000607941 LRP2P98164 4655 aa4.45□□□□□ -1.7
SYT6-202ENST00000607941 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
SYT6-202ENST00000607941 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
SYT6-202ENST00000607941 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.71
SYT6-202ENST00000607941 RYR2Q92736 4967 aa4.27□□□□□ -1.73
SYT6-202ENST00000607941 LPAP08519 4548 aa4.26□□□□□ -1.73
SYT6-202ENST00000607941 PKD1P98161 4303 aa4.25□□□□□ -1.73
SYT6-202ENST00000607941 HSPG2P98160 4391 aa4.25□□□□□ -1.73
SYT6-202ENST00000607941 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
SYT6-202ENST00000607941 HERC2O95714 4834 aa4.22□□□□□ -1.73
SYT6-202ENST00000607941 EPPK1P58107 5090 aaKnown RBP4.19□□□□□ -1.74
SYT6-202ENST00000607941 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
SYT6-202ENST00000607941 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
SYT6-202ENST00000607941 MUC2Q02817 5179 aa4.09□□□□□ -1.75
SYT6-202ENST00000607941 PCLOQ9Y6V0 5065 aa4.06□□□□□ -1.76
SYT6-202ENST00000607941 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
SYT6-202ENST00000607941 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
SYT6-202ENST00000607941 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
SYT6-202ENST00000607941 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
SYT6-202ENST00000607941 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
SYT6-202ENST00000607941 MT1HP80294 61 aa4.02□□□□□ -1.77
SYT6-202ENST00000607941 MT2AP02795 61 aa4□□□□□ -1.77
SYT6-202ENST00000607941 MT1FP04733 61 aa4□□□□□ -1.77
SYT6-202ENST00000607941 TNXBP22105 4242 aa3.98□□□□□ -1.77
SYT6-202ENST00000607941 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
SYT6-202ENST00000607941 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
SYT6-202ENST00000607941 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
SYT6-202ENST00000607941 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
SYT6-202ENST00000607941 HERC1Q15751 4861 aa3.93□□□□□ -1.78
SYT6-202ENST00000607941 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
SYT6-202ENST00000607941 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
SYT6-202ENST00000607941 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
SYT6-202ENST00000607941 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
SYT6-202ENST00000607941 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
SYT6-202ENST00000607941 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
SYT6-202ENST00000607941 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
SYT6-202ENST00000607941 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
SYT6-202ENST00000607941 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
SYT6-202ENST00000607941 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
SYT6-202ENST00000607941 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
SYT6-202ENST00000607941 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SYT6-202ENST00000607941 INE1O15225 51 aa3.74□□□□□ -1.81
SYT6-202ENST00000607941 MT1XP80297 61 aa3.72□□□□□ -1.81
SYT6-202ENST00000607941 MT1BP07438 61 aa3.72□□□□□ -1.81
SYT6-202ENST00000607941 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
SYT6-202ENST00000607941 KRTAP10-5P60370 271 aa3.7□□□□□ -1.82
SYT6-202ENST00000607941 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
SYT6-202ENST00000607941 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
SYT6-202ENST00000607941 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
SYT6-202ENST00000607941 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
SYT6-202ENST00000607941 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
SYT6-202ENST00000607941 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
SYT6-202ENST00000607941 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.83
SYT6-202ENST00000607941 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
SYT6-202ENST00000607941 USH2AO75445 5202 aa3.57□□□□□ -1.84
SYT6-202ENST00000607941 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
SYT6-202ENST00000607941 LCE2BO14633 110 aa3.53□□□□□ -1.84
SYT6-202ENST00000607941 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
SYT6-202ENST00000607941 KMT2DO14686 5537 aa3.48□□□□□ -1.85
SYT6-202ENST00000607941 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
SYT6-202ENST00000607941 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
SYT6-202ENST00000607941 MT1GP13640 62 aa3.41□□□□□ -1.86
SYT6-202ENST00000607941 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
SYT6-202ENST00000607941 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
SYT6-202ENST00000607941 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms