RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 C14orf177Q52M58 125 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 KRTAP10-8P60410 259 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 KRTAP1-5Q9BYS1 174 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
LINC01109-201ENST00000603837 KMT2AQ03164 3969 aa2.57□□□□□ -2
LINC01109-201ENST00000603837 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
LINC01109-201ENST00000603837 PLECQ15149 4684 aaKnown RBP2.57□□□□□ -2
LINC01109-201ENST00000603837 DNAH10Q8IVF4 4471 aa2.57□□□□□ -2
LINC01109-201ENST00000603837 SRRM2Q9UQ35 2752 aaKnown RBP2.56□□□□□ -2
LINC01109-201ENST00000603837 SPINK6Q6UWN8 80 aa2.56□□□□□ -2
LINC01109-201ENST00000603837 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
LINC01109-201ENST00000603837 UBE2DNLQ8IWF7 75 aa2.54□□□□□ -2
LINC01109-201ENST00000603837 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
LINC01109-201ENST00000603837 FRAS1Q86XX4 4008 aa2.5□□□□□ -2.01
LINC01109-201ENST00000603837 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
LINC01109-201ENST00000603837 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
LINC01109-201ENST00000603837 HYDINQ4G0P3 5121 aa2.48□□□□□ -2.01
LINC01109-201ENST00000603837 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
LINC01109-201ENST00000603837 VPS13DQ5THJ4 4388 aa2.47□□□□□ -2.01
LINC01109-201ENST00000603837 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
LINC01109-201ENST00000603837 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
LINC01109-201ENST00000603837 DNAH6Q9C0G6 4158 aa2.46□□□□□ -2.01
LINC01109-201ENST00000603837 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
LINC01109-201ENST00000603837 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
LINC01109-201ENST00000603837 A0A0D9SG42 100 aa2.45□□□□□ -2.02
LINC01109-201ENST00000603837 MT3P25713 68 aa2.45□□□□□ -2.02
LINC01109-201ENST00000603837 PKHD1P08F94 4074 aa2.45□□□□□ -2.02
LINC01109-201ENST00000603837 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
LINC01109-201ENST00000603837 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
LINC01109-201ENST00000603837 DNAH8Q96JB1 4490 aa2.42□□□□□ -2.02
LINC01109-201ENST00000603837 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
LINC01109-201ENST00000603837 Q6ZRN7 208 aaPredicted RBP2.41□□□□□ -2.02
LINC01109-201ENST00000603837 SACSQ9NZJ4 4579 aa2.4□□□□□ -2.02
LINC01109-201ENST00000603837 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
LINC01109-201ENST00000603837 S4R3F8 94 aa2.4□□□□□ -2.03
LINC01109-201ENST00000603837 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
LINC01109-201ENST00000603837 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
LINC01109-201ENST00000603837 RYR3Q15413 4870 aa2.37□□□□□ -2.03
LINC01109-201ENST00000603837 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
LINC01109-201ENST00000603837 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
LINC01109-201ENST00000603837 RYR2Q92736 4967 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 VPS13BQ7Z7G8 4022 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 FAT1Q14517 4588 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 PKD1P98161 4303 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 LRP1BQ9NZR2 4599 aa2.35□□□□□ -2.03
LINC01109-201ENST00000603837 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
LINC01109-201ENST00000603837 SMR3BP02814 79 aaPredicted RBP2.34□□□□□ -2.03
LINC01109-201ENST00000603837 BIRC6Q9NR09 4857 aa2.34□□□□□ -2.03
LINC01109-201ENST00000603837 KRTAP10-1P60331 282 aa2.34□□□□□ -2.04
LINC01109-201ENST00000603837 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
LINC01109-201ENST00000603837 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
LINC01109-201ENST00000603837 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
LINC01109-201ENST00000603837 INE1O15225 51 aa2.31□□□□□ -2.04
LINC01109-201ENST00000603837 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
LINC01109-201ENST00000603837 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
LINC01109-201ENST00000603837 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
LINC01109-201ENST00000603837 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
LINC01109-201ENST00000603837 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.04
LINC01109-201ENST00000603837 LRP1Q07954 4544 aaKnown RBP2.27□□□□□ -2.05
LINC01109-201ENST00000603837 KRTAP10-7P60409 375 aaPredicted RBP2.26□□□□□ -2.05
LINC01109-201ENST00000603837 HERC2O95714 4834 aa2.26□□□□□ -2.05
LINC01109-201ENST00000603837 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
LINC01109-201ENST00000603837 HSPG2P98160 4391 aa2.24□□□□□ -2.05
LINC01109-201ENST00000603837 RYR1P21817 5038 aa2.23□□□□□ -2.05
LINC01109-201ENST00000603837 FAT3Q8TDW7 4589 aa2.22□□□□□ -2.05
LINC01109-201ENST00000603837 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.06
LINC01109-201ENST00000603837 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
LINC01109-201ENST00000603837 Q5VSD8 79 aa2.2□□□□□ -2.06
LINC01109-201ENST00000603837 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
LINC01109-201ENST00000603837 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
LINC01109-201ENST00000603837 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
LINC01109-201ENST00000603837 M0QZ58 72 aa2.19□□□□□ -2.06
LINC01109-201ENST00000603837 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
LINC01109-201ENST00000603837 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
LINC01109-201ENST00000603837 TNXBP22105 4242 aa2.18□□□□□ -2.06
LINC01109-201ENST00000603837 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
LINC01109-201ENST00000603837 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
LINC01109-201ENST00000603837 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
LINC01109-201ENST00000603837 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
LINC01109-201ENST00000603837 PCLOQ9Y6V0 5065 aa2.14□□□□□ -2.07
LINC01109-201ENST00000603837 HERC1Q15751 4861 aa2.14□□□□□ -2.07
LINC01109-201ENST00000603837 LRP2P98164 4655 aa2.12□□□□□ -2.07
LINC01109-201ENST00000603837 KRTAP10-5P60370 271 aa2.12□□□□□ -2.07
LINC01109-201ENST00000603837 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
LINC01109-201ENST00000603837 LPAP08519 4548 aa2.11□□□□□ -2.07
LINC01109-201ENST00000603837 MUC2Q02817 5179 aa2.1□□□□□ -2.07
LINC01109-201ENST00000603837 MT1HL1P0DM35 61 aa2.09□□□□□ -2.08
LINC01109-201ENST00000603837 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
LINC01109-201ENST00000603837 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
LINC01109-201ENST00000603837 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
LINC01109-201ENST00000603837 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.09
LINC01109-201ENST00000603837 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
LINC01109-201ENST00000603837 TNP1P09430 55 aa1.98□□□□□ -2.09
LINC01109-201ENST00000603837 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
LINC01109-201ENST00000603837 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms