RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 DYNC2H1Q8NCM8 4307 aaKnown RBP1.47□□□□□ -2.17
NEB-218ENST00000603639 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
NEB-218ENST00000603639 DNAH2Q9P225 4427 aa1.47□□□□□ -2.17
NEB-218ENST00000603639 LYSTQ99698 3801 aa1.46□□□□□ -2.17
NEB-218ENST00000603639 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
NEB-218ENST00000603639 VPS13DQ5THJ4 4388 aa1.46□□□□□ -2.18
NEB-218ENST00000603639 ZNF469Q96JG9 3925 aaPredicted RBP1.46□□□□□ -2.18
NEB-218ENST00000603639 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
NEB-218ENST00000603639 DNAH17Q9UFH2 4485 aa1.45□□□□□ -2.18
NEB-218ENST00000603639 ZFHX4Q86UP3 3567 aa1.44□□□□□ -2.18
NEB-218ENST00000603639 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
NEB-218ENST00000603639 LORP23490 312 aaPredicted RBP1.43□□□□□ -2.18
NEB-218ENST00000603639 CUBNO60494 3623 aa1.43□□□□□ -2.18
NEB-218ENST00000603639 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
NEB-218ENST00000603639 RELNP78509 3460 aa1.43□□□□□ -2.18
NEB-218ENST00000603639 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
NEB-218ENST00000603639 KRTAP10-5P60370 271 aa1.4□□□□□ -2.19
NEB-218ENST00000603639 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
NEB-218ENST00000603639 SYNE2Q8WXH0 6885 aaKnown RBP1.39□□□□□ -2.19
NEB-218ENST00000603639 PKHD1P08F94 4074 aa1.39□□□□□ -2.19
NEB-218ENST00000603639 SVEP1Q4LDE5 3571 aa1.38□□□□□ -2.19
NEB-218ENST00000603639 DNAH8Q96JB1 4490 aa1.38□□□□□ -2.19
NEB-218ENST00000603639 PLECQ15149 4684 aaKnown RBP1.37□□□□□ -2.19
NEB-218ENST00000603639 PKHD1L1Q86WI1 4243 aa1.37□□□□□ -2.19
NEB-218ENST00000603639 DNAH9Q9NYC9 4486 aa1.36□□□□□ -2.19
NEB-218ENST00000603639 KRTAP10-12P60413 245 aa1.36□□□□□ -2.19
NEB-218ENST00000603639 SPRR2GQ9BYE4 73 aa1.36□□□□□ -2.19
NEB-218ENST00000603639 CSMD1Q96PZ7 3565 aa1.34□□□□□ -2.19
NEB-218ENST00000603639 TNXBP22105 4242 aa1.33□□□□□ -2.2
NEB-218ENST00000603639 KRTAP8-1Q8IUC2 63 aa1.33□□□□□ -2.2
NEB-218ENST00000603639 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
NEB-218ENST00000603639 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
NEB-218ENST00000603639 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
NEB-218ENST00000603639 PKD1P98161 4303 aa1.32□□□□□ -2.2
NEB-218ENST00000603639 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
NEB-218ENST00000603639 CSMD2Q7Z408 3487 aa1.31□□□□□ -2.2
NEB-218ENST00000603639 LCE3AQ5TA76 89 aa1.31□□□□□ -2.2
NEB-218ENST00000603639 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
NEB-218ENST00000603639 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
NEB-218ENST00000603639 CSMD3Q7Z407 3707 aa1.29□□□□□ -2.2
NEB-218ENST00000603639 KRTAP10-7P60409 375 aaPredicted RBP1.29□□□□□ -2.2
NEB-218ENST00000603639 FAT2Q9NYQ8 4349 aa1.28□□□□□ -2.2
NEB-218ENST00000603639 DYNC1H1Q14204 4646 aaKnown RBP1.27□□□□□ -2.21
NEB-218ENST00000603639 SACSQ9NZJ4 4579 aa1.27□□□□□ -2.21
NEB-218ENST00000603639 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
NEB-218ENST00000603639 HSPG2P98160 4391 aa1.26□□□□□ -2.21
NEB-218ENST00000603639 MT1EP04732 61 aa1.26□□□□□ -2.21
NEB-218ENST00000603639 MT1GP13640 62 aa1.25□□□□□ -2.21
NEB-218ENST00000603639 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
NEB-218ENST00000603639 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
NEB-218ENST00000603639 DNAH5Q8TE73 4624 aa1.23□□□□□ -2.21
NEB-218ENST00000603639 MT1LQ93083 61 aa1.23□□□□□ -2.21
NEB-218ENST00000603639 MT1AP04731 61 aa1.22□□□□□ -2.21
NEB-218ENST00000603639 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
NEB-218ENST00000603639 MT1FP04733 61 aa1.21□□□□□ -2.21
NEB-218ENST00000603639 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
NEB-218ENST00000603639 MYCBP2O75592 4640 aa1.21□□□□□ -2.22
NEB-218ENST00000603639 MT1HP80294 61 aa1.19□□□□□ -2.22
NEB-218ENST00000603639 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
NEB-218ENST00000603639 FAT1Q14517 4588 aa1.18□□□□□ -2.22
NEB-218ENST00000603639 RYR3Q15413 4870 aa1.18□□□□□ -2.22
NEB-218ENST00000603639 STARD9Q9P2P6 4700 aa1.16□□□□□ -2.22
NEB-218ENST00000603639 KRTAP4-5Q9BYR2 181 aa1.16□□□□□ -2.22
NEB-218ENST00000603639 MT2AP02795 61 aa1.16□□□□□ -2.22
NEB-218ENST00000603639 MT1MQ8N339 61 aa1.16□□□□□ -2.22
NEB-218ENST00000603639 KRTAP4-1Q9BYQ7 146 aa1.15□□□□□ -2.23
NEB-218ENST00000603639 DNHD1Q96M86 4753 aa1.15□□□□□ -2.23
NEB-218ENST00000603639 LRP1Q07954 4544 aaKnown RBP1.15□□□□□ -2.23
NEB-218ENST00000603639 SPRR2AP35326 72 aa1.13□□□□□ -2.23
NEB-218ENST00000603639 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
NEB-218ENST00000603639 HERC1Q15751 4861 aa1.12□□□□□ -2.23
NEB-218ENST00000603639 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
NEB-218ENST00000603639 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
NEB-218ENST00000603639 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
NEB-218ENST00000603639 MT1XP80297 61 aa1.11□□□□□ -2.23
NEB-218ENST00000603639 KRTAP9-8Q9BYQ0 159 aa1.11□□□□□ -2.23
NEB-218ENST00000603639 KRTAP4-7Q9BYR0 210 aa1.11□□□□□ -2.23
NEB-218ENST00000603639 KRTAP19-1Q8IUB9 90 aa1.11□□□□□ -2.23
NEB-218ENST00000603639 MUC17Q685J3 4493 aa1.1□□□□□ -2.23
NEB-218ENST00000603639 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
NEB-218ENST00000603639 SPRR2BP35325 72 aa1.09□□□□□ -2.23
NEB-218ENST00000603639 RYR1P21817 5038 aa1.09□□□□□ -2.24
NEB-218ENST00000603639 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
NEB-218ENST00000603639 LCE2CQ5TA81 110 aa1.08□□□□□ -2.24
NEB-218ENST00000603639 LCE2DQ5TA82 110 aaPredicted RBP1.08□□□□□ -2.24
NEB-218ENST00000603639 MT1BP07438 61 aa1.07□□□□□ -2.24
NEB-218ENST00000603639 KRTAP17-1Q9BYP8 105 aa1.06□□□□□ -2.24
NEB-218ENST00000603639 KMT2CQ8NEZ4 4911 aaKnown RBP1.06□□□□□ -2.24
NEB-218ENST00000603639 KRTAP4-8A0A0G2JLE6 195 aa1.05□□□□□ -2.24
NEB-218ENST00000603639 KRTAP4-8Q9BYQ9 185 aa1.05□□□□□ -2.24
NEB-218ENST00000603639 KRTAP9-3Q9BYQ3 159 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 RYR2Q92736 4967 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 LRP2P98164 4655 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 HERC2O95714 4834 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 LCE1AQ5T7P2 110 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 LCE2BO14633 110 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 KRTAP4-9Q9BYQ8 210 aa1.04□□□□□ -2.24
NEB-218ENST00000603639 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
NEB-218ENST00000603639 LOC100996750A0A140TA64 210 aa1.03□□□□□ -2.24
NEB-218ENST00000603639 KRTAP9-4Q9BYQ2 154 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms