RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PKD1L1Q8TDX9 2849 aa2.63□□□□□ -1.99
SPTBN1-206ENST00000602898 NOTCH1P46531 2555 aa2.63□□□□□ -1.99
SPTBN1-206ENST00000602898 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
SPTBN1-206ENST00000602898 H3BNG1 76 aa2.61□□□□□ -1.99
SPTBN1-206ENST00000602898 Q6ZRN7 208 aaPredicted RBP2.61□□□□□ -1.99
SPTBN1-206ENST00000602898 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
SPTBN1-206ENST00000602898 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
SPTBN1-206ENST00000602898 HECTD4Q9Y4D8 3996 aa2.61□□□□□ -1.99
SPTBN1-206ENST00000602898 FAT2Q9NYQ8 4349 aa2.6□□□□□ -1.99
SPTBN1-206ENST00000602898 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
SPTBN1-206ENST00000602898 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
SPTBN1-206ENST00000602898 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
SPTBN1-206ENST00000602898 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
SPTBN1-206ENST00000602898 RPL37P61927 97 aaKnown RBP2.59□□□□□ -1.99
SPTBN1-206ENST00000602898 LRP1BQ9NZR2 4599 aa2.59□□□□□ -2
SPTBN1-206ENST00000602898 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
SPTBN1-206ENST00000602898 KRTAP10-3P60369 221 aa2.58□□□□□ -2
SPTBN1-206ENST00000602898 VWFP04275 2813 aa2.57□□□□□ -2
SPTBN1-206ENST00000602898 SPINK1P00995 79 aa2.57□□□□□ -2
SPTBN1-206ENST00000602898 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
SPTBN1-206ENST00000602898 LYSTQ99698 3801 aa2.56□□□□□ -2
SPTBN1-206ENST00000602898 PLAC4Q8WY50 150 aa2.56□□□□□ -2
SPTBN1-206ENST00000602898 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
SPTBN1-206ENST00000602898 DNAH9Q9NYC9 4486 aa2.55□□□□□ -2
SPTBN1-206ENST00000602898 HYDINQ4G0P3 5121 aa2.55□□□□□ -2
SPTBN1-206ENST00000602898 KMT2AQ03164 3969 aa2.55□□□□□ -2
SPTBN1-206ENST00000602898 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
SPTBN1-206ENST00000602898 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
SPTBN1-206ENST00000602898 SPINK6Q6UWN8 80 aa2.54□□□□□ -2
SPTBN1-206ENST00000602898 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
SPTBN1-206ENST00000602898 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
SPTBN1-206ENST00000602898 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
SPTBN1-206ENST00000602898 INE1O15225 51 aa2.52□□□□□ -2.01
SPTBN1-206ENST00000602898 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SPTBN1-206ENST00000602898 HUWE1Q7Z6Z7 4374 aaKnown RBP2.49□□□□□ -2.01
SPTBN1-206ENST00000602898 DNAH2Q9P225 4427 aa2.49□□□□□ -2.01
SPTBN1-206ENST00000602898 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
SPTBN1-206ENST00000602898 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
SPTBN1-206ENST00000602898 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
SPTBN1-206ENST00000602898 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
SPTBN1-206ENST00000602898 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
SPTBN1-206ENST00000602898 VPS13BQ7Z7G8 4022 aa2.47□□□□□ -2.01
SPTBN1-206ENST00000602898 DNAH11Q96DT5 4516 aa2.47□□□□□ -2.01
SPTBN1-206ENST00000602898 KRTAP1-5Q9BYS1 174 aa2.47□□□□□ -2.01
SPTBN1-206ENST00000602898 FAT3Q8TDW7 4589 aa2.47□□□□□ -2.01
SPTBN1-206ENST00000602898 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
SPTBN1-206ENST00000602898 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.02
SPTBN1-206ENST00000602898 S4R3F8 94 aa2.46□□□□□ -2.02
SPTBN1-206ENST00000602898 UBE2DNLQ8IWF7 75 aa2.44□□□□□ -2.02
SPTBN1-206ENST00000602898 PLECQ15149 4684 aaKnown RBP2.44□□□□□ -2.02
SPTBN1-206ENST00000602898 APLNQ9ULZ1 77 aa2.43□□□□□ -2.02
SPTBN1-206ENST00000602898 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
SPTBN1-206ENST00000602898 A0A0D9SG42 100 aa2.41□□□□□ -2.02
SPTBN1-206ENST00000602898 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
SPTBN1-206ENST00000602898 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
SPTBN1-206ENST00000602898 RYR1P21817 5038 aa2.4□□□□□ -2.03
SPTBN1-206ENST00000602898 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
SPTBN1-206ENST00000602898 STAB2Q8WWQ8 2551 aa2.39□□□□□ -2.03
SPTBN1-206ENST00000602898 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
SPTBN1-206ENST00000602898 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
SPTBN1-206ENST00000602898 VPS13DQ5THJ4 4388 aa2.39□□□□□ -2.03
SPTBN1-206ENST00000602898 ABCA13Q86UQ4 5058 aa2.38□□□□□ -2.03
SPTBN1-206ENST00000602898 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
SPTBN1-206ENST00000602898 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
SPTBN1-206ENST00000602898 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
SPTBN1-206ENST00000602898 KRTAP1-4P0C5Y4 121 aa2.34□□□□□ -2.03
SPTBN1-206ENST00000602898 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
SPTBN1-206ENST00000602898 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
SPTBN1-206ENST00000602898 HSPG2P98160 4391 aa2.32□□□□□ -2.04
SPTBN1-206ENST00000602898 DMBT1Q9UGM3 2413 aaPredicted RBP2.29□□□□□ -2.04
SPTBN1-206ENST00000602898 MT3P25713 68 aa2.29□□□□□ -2.04
SPTBN1-206ENST00000602898 PKD1P98161 4303 aa2.29□□□□□ -2.04
SPTBN1-206ENST00000602898 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
SPTBN1-206ENST00000602898 Q5VSD8 79 aa2.28□□□□□ -2.04
SPTBN1-206ENST00000602898 TNXBP22105 4242 aa2.28□□□□□ -2.04
SPTBN1-206ENST00000602898 KRTAP10-1P60331 282 aa2.26□□□□□ -2.05
SPTBN1-206ENST00000602898 FAT1Q14517 4588 aa2.26□□□□□ -2.05
SPTBN1-206ENST00000602898 HERC1Q15751 4861 aa2.25□□□□□ -2.05
SPTBN1-206ENST00000602898 M0QZ58 72 aa2.25□□□□□ -2.05
SPTBN1-206ENST00000602898 MYCBP2O75592 4640 aa2.25□□□□□ -2.05
SPTBN1-206ENST00000602898 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
SPTBN1-206ENST00000602898 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
SPTBN1-206ENST00000602898 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
SPTBN1-206ENST00000602898 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
SPTBN1-206ENST00000602898 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
SPTBN1-206ENST00000602898 DNAH5Q8TE73 4624 aa2.21□□□□□ -2.06
SPTBN1-206ENST00000602898 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
SPTBN1-206ENST00000602898 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
SPTBN1-206ENST00000602898 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
SPTBN1-206ENST00000602898 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
SPTBN1-206ENST00000602898 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
SPTBN1-206ENST00000602898 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
SPTBN1-206ENST00000602898 MT1HL1P0DM35 61 aa2.17□□□□□ -2.06
SPTBN1-206ENST00000602898 MUC17Q685J3 4493 aa2.14□□□□□ -2.07
SPTBN1-206ENST00000602898 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
SPTBN1-206ENST00000602898 SMR3BP02814 79 aaPredicted RBP2.12□□□□□ -2.07
SPTBN1-206ENST00000602898 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
SPTBN1-206ENST00000602898 LRP1Q07954 4544 aaKnown RBP2.09□□□□□ -2.07
SPTBN1-206ENST00000602898 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.08
SPTBN1-206ENST00000602898 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms