RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190		M0R143	59 aa		7.55	□□□□□ -1.2
IRF3-231	ENST00000602190	KRTAP4-8	A0A0G2JLE6	195 aa		7.53	□□□□□ -1.2
IRF3-231	ENST00000602190	KRTAP4-8	Q9BYQ9	185 aa		7.53	□□□□□ -1.2
IRF3-231	ENST00000602190	LCE3B	Q5TA77	95 aa		7.52	□□□□□ -1.21
IRF3-231	ENST00000602190	TP53AIP1	Q9HCN2	124 aa		7.49	□□□□□ -1.21
IRF3-231	ENST00000602190		A8MUN3	132 aa		7.48	□□□□□ -1.21
IRF3-231	ENST00000602190	CYP4F30P	Q9H0H9	118 aa		7.46	□□□□□ -1.22
IRF3-231	ENST00000602190	PLAC4	Q8WY50	150 aa		7.4	□□□□□ -1.22
IRF3-231	ENST00000602190	TSTD3	H0UI37	97 aa		7.36	□□□□□ -1.23
IRF3-231	ENST00000602190	NDUFC1	O43677	76 aa		7.36	□□□□□ -1.23
IRF3-231	ENST00000602190	ADM2	Q7Z4H4	148 aa		7.36	□□□□□ -1.23
IRF3-231	ENST00000602190	GPR98	Q8WXG9	6306 aa		7.35	□□□□□ -1.23
IRF3-231	ENST00000602190	KRTAP10-12	P60413	245 aa		7.35	□□□□□ -1.23
IRF3-231	ENST00000602190	UBL5	Q9BZL1	73 aa		7.35	□□□□□ -1.23
IRF3-231	ENST00000602190	C9orf118	A6NHY6	69 aa		7.32	□□□□□ -1.24
IRF3-231	ENST00000602190	KRTAP10-7	P60409	375 aa	Predicted RBP	7.32	□□□□□ -1.24
IRF3-231	ENST00000602190		A0A1W2PPM0	123 aa		7.31	□□□□□ -1.24
IRF3-231	ENST00000602190	LOC101927531	A0A1B0GV80	90 aa		7.3	□□□□□ -1.24
IRF3-231	ENST00000602190	TRAV22	A0A0B4J277	110 aa		7.26	□□□□□ -1.25
IRF3-231	ENST00000602190	TAX1BP3	O14907	124 aa		7.26	□□□□□ -1.25
IRF3-231	ENST00000602190		K7EP34	96 aa		7.25	□□□□□ -1.25
IRF3-231	ENST00000602190		R4GN34	69 aa		7.21	□□□□□ -1.26
IRF3-231	ENST00000602190		P0C880	135 aa		7.19	□□□□□ -1.26
IRF3-231	ENST00000602190	BATF	Q16520	125 aa		7.19	□□□□□ -1.26
IRF3-231	ENST00000602190	DST	Q03001	7570 aa	Known RBP	7.19	□□□□□ -1.26
IRF3-231	ENST00000602190	PRO0461	Q9UI25	63 aa		7.17	□□□□□ -1.26
IRF3-231	ENST00000602190	TMA7	Q9Y2S6	64 aa	Known RBP	7.16	□□□□□ -1.26
IRF3-231	ENST00000602190	ACYP1	P07311	99 aa		7.14	□□□□□ -1.27
IRF3-231	ENST00000602190		M0QZ58	72 aa		7.13	□□□□□ -1.27
IRF3-231	ENST00000602190	KRTAP4-9	Q9BYQ8	210 aa		7.12	□□□□□ -1.27
IRF3-231	ENST00000602190	SPCS1	Q9Y6A9	102 aa		7.12	□□□□□ -1.27
IRF3-231	ENST00000602190	SMIM6	P0DI80	62 aa		7.1	□□□□□ -1.27
IRF3-231	ENST00000602190	C20orf197	Q8N268	126 aa		7.1	□□□□□ -1.27
IRF3-231	ENST00000602190	KRTAP3-2	Q9BYR7	98 aa		7.1	□□□□□ -1.27
IRF3-231	ENST00000602190	LCE5A	Q5TCM9	118 aa		7.06	□□□□□ -1.28
IRF3-231	ENST00000602190	ATOX1	O00244	68 aa		7.05	□□□□□ -1.28
IRF3-231	ENST00000602190	UQCRQ	O14949	82 aa		7.04	□□□□□ -1.28
IRF3-231	ENST00000602190		H0Y9P7	68 aa		7.03	□□□□□ -1.28
IRF3-231	ENST00000602190	LINC01554	Q52M75	96 aa		6.98	□□□□□ -1.29
IRF3-231	ENST00000602190	LCE1D	Q5T752	114 aa		6.96	□□□□□ -1.3
IRF3-231	ENST00000602190	KRTAP19-7	Q3SYF9	63 aa		6.94	□□□□□ -1.3
IRF3-231	ENST00000602190	KRTAP19-3	Q7Z4W3	81 aa		6.92	□□□□□ -1.3
IRF3-231	ENST00000602190	MT1E	P04732	61 aa		6.87	□□□□□ -1.31
IRF3-231	ENST00000602190	LINC00208	Q96KT6	92 aa		6.85	□□□□□ -1.31
IRF3-231	ENST00000602190	HMCN1	Q96RW7	5635 aa		6.83	□□□□□ -1.32
IRF3-231	ENST00000602190	ETDB	Q3ZM63	59 aa		6.82	□□□□□ -1.32
IRF3-231	ENST00000602190	DMAC1	Q96GE9	116 aa		6.82	□□□□□ -1.32
IRF3-231	ENST00000602190	LCE4A	Q5TA78	99 aa		6.81	□□□□□ -1.32
IRF3-231	ENST00000602190	ATP5EP2	Q5VTU8	51 aa		6.81	□□□□□ -1.32
IRF3-231	ENST00000602190	KRTAP5-10	Q6L8G5	202 aa		6.8	□□□□□ -1.32
IRF3-231	ENST00000602190		F8W1H4	67 aa		6.78	□□□□□ -1.32
IRF3-231	ENST00000602190	COL5A1-AS1	Q5SY13	56 aa		6.76	□□□□□ -1.33
IRF3-231	ENST00000602190	HIST1H4A	P62805	103 aa	Known RBP	6.75	□□□□□ -1.33
IRF3-231	ENST00000602190	OCR1	Q9BZK8	76 aa		6.75	□□□□□ -1.33
IRF3-231	ENST00000602190	CYSTM1	Q9H1C7	97 aa		6.75	□□□□□ -1.33
IRF3-231	ENST00000602190	AHNAK2	Q8IVF2	5795 aa		6.74	□□□□□ -1.33
IRF3-231	ENST00000602190	MT-ATP8	P03928	68 aa		6.72	□□□□□ -1.33
IRF3-231	ENST00000602190	MT4	P47944	62 aa		6.71	□□□□□ -1.34
IRF3-231	ENST00000602190	FAM240A	A0A1B0GVK7	77 aa		6.7	□□□□□ -1.34
IRF3-231	ENST00000602190	MP68	P56378	58 aa		6.7	□□□□□ -1.34
IRF3-231	ENST00000602190	MT1G	P13640	62 aa		6.69	□□□□□ -1.34
IRF3-231	ENST00000602190	KRTAP5-4	Q6L8H1	288 aa		6.68	□□□□□ -1.34
IRF3-231	ENST00000602190	GTF2H5	Q6ZYL4	71 aa		6.68	□□□□□ -1.34
IRF3-231	ENST00000602190	TRAV7	A0A075B6U4	112 aa		6.63	□□□□□ -1.35
IRF3-231	ENST00000602190		H3BPC8	53 aa		6.63	□□□□□ -1.35
IRF3-231	ENST00000602190	KRTAP5-7	Q6L8G8	165 aa		6.62	□□□□□ -1.35
IRF3-231	ENST00000602190	LOC105371267	A0A1B0GV96	52 aa		6.59	□□□□□ -1.35
IRF3-231	ENST00000602190	PP632	Q6XCG6	107 aa		6.57	□□□□□ -1.36
IRF3-231	ENST00000602190	MT1M	Q8N339	61 aa		6.57	□□□□□ -1.36
IRF3-231	ENST00000602190	KRTAP4-6	Q9BYQ5	205 aa		6.55	□□□□□ -1.36
IRF3-231	ENST00000602190	KRTAP19-5	Q3LI72	72 aa		6.53	□□□□□ -1.36
IRF3-231	ENST00000602190	KRTAP13-4	Q3LI77	160 aa		6.53	□□□□□ -1.36
IRF3-231	ENST00000602190	LINC00643	Q86TS7	51 aa		6.53	□□□□□ -1.36
IRF3-231	ENST00000602190	CAMK2N1	Q7Z7J9	78 aa		6.49	□□□□□ -1.37
IRF3-231	ENST00000602190	KRTAP5-3	Q6L8H2	238 aa		6.48	□□□□□ -1.37
IRF3-231	ENST00000602190	MT1L	Q93083	61 aa		6.47	□□□□□ -1.37
IRF3-231	ENST00000602190	ACYP2	P14621	99 aa		6.46	□□□□□ -1.38
IRF3-231	ENST00000602190	SPTSSB	Q8NFR3	76 aa		6.45	□□□□□ -1.38
IRF3-231	ENST00000602190		A0A0D9SG42	100 aa		6.42	□□□□□ -1.38
IRF3-231	ENST00000602190	KRTAP4-3	Q9BYR4	195 aa		6.4	□□□□□ -1.38
IRF3-231	ENST00000602190	KRTAP20-2	Q3LI61	65 aa		6.27	□□□□□ -1.41
IRF3-231	ENST00000602190	CHKB-CPT1B	H3BT56	60 aa		6.24	□□□□□ -1.41
IRF3-231	ENST00000602190	SPRR5	A0A1B0GTR4	108 aa		6.2	□□□□□ -1.42
IRF3-231	ENST00000602190	SCGB1A1	P11684	91 aa		6.18	□□□□□ -1.42
IRF3-231	ENST00000602190	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.17	□□□□□ -1.42
IRF3-231	ENST00000602190	C10orf95	Q9H7T3	257 aa		6.14	□□□□□ -1.43
IRF3-231	ENST00000602190	KRTAP12-1	P59990	96 aa		6.11	□□□□□ -1.43
IRF3-231	ENST00000602190	PCP4L1	A6NKN8	68 aa		6.1	□□□□□ -1.43
IRF3-231	ENST00000602190	LCE3A	Q5TA76	89 aa		6.1	□□□□□ -1.43
IRF3-231	ENST00000602190	KRTAP4-7	Q9BYR0	210 aa		6.09	□□□□□ -1.43
IRF3-231	ENST00000602190	SPINT4	Q6UDR6	99 aa		6.04	□□□□□ -1.44
IRF3-231	ENST00000602190	SPANXA2-OT1	Q8N9U9	137 aa		6.04	□□□□□ -1.44
IRF3-231	ENST00000602190	SPATA8	Q6RVD6	105 aa		6.02	□□□□□ -1.45
IRF3-231	ENST00000602190	KRTAP12-4	P60329	112 aa		5.99	□□□□□ -1.45
IRF3-231	ENST00000602190	SMIM20	Q8N5G0	67 aa		5.98	□□□□□ -1.45
IRF3-231	ENST00000602190	SYNE1	Q8NF91	8797 aa	Known RBP	5.92	□□□□□ -1.46
IRF3-231	ENST00000602190	SNURF	Q9Y675	71 aa		5.91	□□□□□ -1.46
IRF3-231	ENST00000602190		A0A1B0GU33	70 aa		5.89	□□□□□ -1.47
IRF3-231	ENST00000602190	TNP1	P09430	55 aa		5.89	□□□□□ -1.47
IRF3-231	ENST00000602190	SERP1	Q9Y6X1	66 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms