RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 H0YAA0 97 aa9.01□□□□□ -0.97
PNKP-212ENST00000599454 SPRR2EP22531 72 aa9□□□□□ -0.97
PNKP-212ENST00000599454 SPRR2BP35325 72 aa9□□□□□ -0.97
PNKP-212ENST00000599454 SPRR2AP35326 72 aa9□□□□□ -0.97
PNKP-212ENST00000599454 PRO2289Q9P1D8 64 aa9□□□□□ -0.97
PNKP-212ENST00000599454 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
PNKP-212ENST00000599454 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
PNKP-212ENST00000599454 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
PNKP-212ENST00000599454 LOC105371267A0A1B0GV96 52 aa8.94□□□□□ -0.98
PNKP-212ENST00000599454 NDUFC1O43677 76 aa8.94□□□□□ -0.98
PNKP-212ENST00000599454 A8MUN3 132 aa8.91□□□□□ -0.98
PNKP-212ENST00000599454 MT1XP80297 61 aa8.88□□□□□ -0.99
PNKP-212ENST00000599454 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
PNKP-212ENST00000599454 ADM2Q7Z4H4 148 aa8.85□□□□□ -0.99
PNKP-212ENST00000599454 KRTAP2-2Q9BYT5 123 aa8.85□□□□□ -0.99
PNKP-212ENST00000599454 KRTAP2-1Q9BYU5 128 aa8.85□□□□□ -0.99
PNKP-212ENST00000599454 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
PNKP-212ENST00000599454 K7EP34 96 aa8.83□□□□□ -1
PNKP-212ENST00000599454 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
PNKP-212ENST00000599454 KRTAP12-2P59991 146 aa8.81□□□□□ -1
PNKP-212ENST00000599454 ACYP1P07311 99 aa8.78□□□□□ -1
PNKP-212ENST00000599454 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
PNKP-212ENST00000599454 ATOX1O00244 68 aa8.76□□□□□ -1.01
PNKP-212ENST00000599454 UQCRQO14949 82 aa8.74□□□□□ -1.01
PNKP-212ENST00000599454 H0Y9P7 68 aa8.72□□□□□ -1.01
PNKP-212ENST00000599454 SPRR2DP22532 72 aa8.71□□□□□ -1.02
PNKP-212ENST00000599454 R4GN34 69 aa8.69□□□□□ -1.02
PNKP-212ENST00000599454 F8W1H4 67 aa8.68□□□□□ -1.02
PNKP-212ENST00000599454 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
PNKP-212ENST00000599454 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
PNKP-212ENST00000599454 C20orf197Q8N268 126 aa8.65□□□□□ -1.02
PNKP-212ENST00000599454 KRTAP4-8A0A0G2JLE6 195 aa8.61□□□□□ -1.03
PNKP-212ENST00000599454 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
PNKP-212ENST00000599454 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
PNKP-212ENST00000599454 M0QZ58 72 aa8.58□□□□□ -1.04
PNKP-212ENST00000599454 HIST1H4AP62805 103 aaKnown RBP8.58□□□□□ -1.04
PNKP-212ENST00000599454 P0C880 135 aa8.57□□□□□ -1.04
PNKP-212ENST00000599454 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
PNKP-212ENST00000599454 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
PNKP-212ENST00000599454 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
PNKP-212ENST00000599454 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
PNKP-212ENST00000599454 MP68P56378 58 aa8.46□□□□□ -1.06
PNKP-212ENST00000599454 KRTAP10-7P60409 375 aaPredicted RBP8.46□□□□□ -1.06
PNKP-212ENST00000599454 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
PNKP-212ENST00000599454 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
PNKP-212ENST00000599454 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
PNKP-212ENST00000599454 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
PNKP-212ENST00000599454 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
PNKP-212ENST00000599454 LINC00643Q86TS7 51 aa8.33□□□□□ -1.08
PNKP-212ENST00000599454 H3BPC8 53 aa8.3□□□□□ -1.08
PNKP-212ENST00000599454 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
PNKP-212ENST00000599454 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
PNKP-212ENST00000599454 GPR98Q8WXG9 6306 aa8.12□□□□□ -1.11
PNKP-212ENST00000599454 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
PNKP-212ENST00000599454 ACYP2P14621 99 aa8.08□□□□□ -1.12
PNKP-212ENST00000599454 A0A1B0GV90 55 aa8.05□□□□□ -1.12
PNKP-212ENST00000599454 DSTQ03001 7570 aaKnown RBP8.04□□□□□ -1.12
PNKP-212ENST00000599454 SCGB1A1P11684 91 aa8.03□□□□□ -1.12
PNKP-212ENST00000599454 LCE5AQ5TCM9 118 aa8.03□□□□□ -1.12
PNKP-212ENST00000599454 KRTAP4-9Q9BYQ8 210 aa7.98□□□□□ -1.13
PNKP-212ENST00000599454 KRTAP19-7Q3SYF9 63 aa7.95□□□□□ -1.14
PNKP-212ENST00000599454 KRTAP19-3Q7Z4W3 81 aa7.95□□□□□ -1.14
PNKP-212ENST00000599454 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
PNKP-212ENST00000599454 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
PNKP-212ENST00000599454 MT1EP04732 61 aa7.91□□□□□ -1.14
PNKP-212ENST00000599454 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
PNKP-212ENST00000599454 J3QR89 54 aa7.81□□□□□ -1.16
PNKP-212ENST00000599454 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
PNKP-212ENST00000599454 LCE1DQ5T752 114 aa7.78□□□□□ -1.16
PNKP-212ENST00000599454 SMIM20Q8N5G0 67 aa7.74□□□□□ -1.17
PNKP-212ENST00000599454 MT1GP13640 62 aa7.72□□□□□ -1.17
PNKP-212ENST00000599454 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
PNKP-212ENST00000599454 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
PNKP-212ENST00000599454 A0A0D9SG42 100 aa7.66□□□□□ -1.18
PNKP-212ENST00000599454 K7ERU9 68 aa7.65□□□□□ -1.18
PNKP-212ENST00000599454 MT4P47944 62 aa7.63□□□□□ -1.19
PNKP-212ENST00000599454 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
PNKP-212ENST00000599454 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
PNKP-212ENST00000599454 SVIPQ8NHG7 77 aa7.61□□□□□ -1.19
PNKP-212ENST00000599454 HMCN1Q96RW7 5635 aa7.6□□□□□ -1.19
PNKP-212ENST00000599454 SNURFQ9Y675 71 aa7.58□□□□□ -1.2
PNKP-212ENST00000599454 MT1MQ8N339 61 aa7.57□□□□□ -1.2
PNKP-212ENST00000599454 MT1LQ93083 61 aa7.49□□□□□ -1.21
PNKP-212ENST00000599454 AHNAK2Q8IVF2 5795 aa7.48□□□□□ -1.21
PNKP-212ENST00000599454 SEC61GP60059 68 aa7.48□□□□□ -1.21
PNKP-212ENST00000599454 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
PNKP-212ENST00000599454 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
PNKP-212ENST00000599454 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
PNKP-212ENST00000599454 KRTAP5-10Q6L8G5 202 aa7.45□□□□□ -1.22
PNKP-212ENST00000599454 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
PNKP-212ENST00000599454 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
PNKP-212ENST00000599454 COA5Q86WW8 74 aa7.39□□□□□ -1.23
PNKP-212ENST00000599454 A0A1B0GU33 70 aa7.37□□□□□ -1.23
PNKP-212ENST00000599454 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
PNKP-212ENST00000599454 KRTAP4-3Q9BYR4 195 aa7.34□□□□□ -1.23
PNKP-212ENST00000599454 SERP2Q8N6R1 65 aa7.29□□□□□ -1.24
PNKP-212ENST00000599454 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
PNKP-212ENST00000599454 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
PNKP-212ENST00000599454 KRTAP5-7Q6L8G8 165 aa7.24□□□□□ -1.25
PNKP-212ENST00000599454 TNP1P09430 55 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 490.4 ms