RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
ZNF558-205ENST00000597304 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
ZNF558-205ENST00000597304 DNHD1Q96M86 4753 aa6.45□□□□□ -1.38
ZNF558-205ENST00000597304 S4R3F8 94 aa6.44□□□□□ -1.38
ZNF558-205ENST00000597304 DYNC1H1Q14204 4646 aaKnown RBP6.4□□□□□ -1.38
ZNF558-205ENST00000597304 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
ZNF558-205ENST00000597304 FAT1Q14517 4588 aa6.38□□□□□ -1.39
ZNF558-205ENST00000597304 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
ZNF558-205ENST00000597304 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
ZNF558-205ENST00000597304 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
ZNF558-205ENST00000597304 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
ZNF558-205ENST00000597304 XP32Q5T750 250 aa6.3□□□□□ -1.4
ZNF558-205ENST00000597304 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
ZNF558-205ENST00000597304 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
ZNF558-205ENST00000597304 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
ZNF558-205ENST00000597304 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
ZNF558-205ENST00000597304 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
ZNF558-205ENST00000597304 HSPG2P98160 4391 aa6.23□□□□□ -1.41
ZNF558-205ENST00000597304 TNXBP22105 4242 aa6.22□□□□□ -1.41
ZNF558-205ENST00000597304 M0QZ58 72 aa6.18□□□□□ -1.42
ZNF558-205ENST00000597304 Q5VSD8 79 aa6.13□□□□□ -1.43
ZNF558-205ENST00000597304 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
ZNF558-205ENST00000597304 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
ZNF558-205ENST00000597304 RYR2Q92736 4967 aa6.01□□□□□ -1.45
ZNF558-205ENST00000597304 LPAP08519 4548 aa5.99□□□□□ -1.45
ZNF558-205ENST00000597304 R4GN34 69 aa5.99□□□□□ -1.45
ZNF558-205ENST00000597304 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
ZNF558-205ENST00000597304 KMT2CQ8NEZ4 4911 aaKnown RBP5.95□□□□□ -1.46
ZNF558-205ENST00000597304 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
ZNF558-205ENST00000597304 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.46
ZNF558-205ENST00000597304 LRP2P98164 4655 aa5.89□□□□□ -1.47
ZNF558-205ENST00000597304 RYR1P21817 5038 aa5.84□□□□□ -1.47
ZNF558-205ENST00000597304 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
ZNF558-205ENST00000597304 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
ZNF558-205ENST00000597304 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
ZNF558-205ENST00000597304 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
ZNF558-205ENST00000597304 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
ZNF558-205ENST00000597304 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
ZNF558-205ENST00000597304 RYR3Q15413 4870 aa5.67□□□□□ -1.5
ZNF558-205ENST00000597304 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
ZNF558-205ENST00000597304 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
ZNF558-205ENST00000597304 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
ZNF558-205ENST00000597304 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
ZNF558-205ENST00000597304 KRTAP19-2Q3LHN2 52 aa5.57□□□□□ -1.52
ZNF558-205ENST00000597304 TNP1P09430 55 aa5.54□□□□□ -1.52
ZNF558-205ENST00000597304 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
ZNF558-205ENST00000597304 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
ZNF558-205ENST00000597304 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
ZNF558-205ENST00000597304 J3QL48 77 aa5.43□□□□□ -1.54
ZNF558-205ENST00000597304 EPPK1P58107 5090 aaKnown RBP5.42□□□□□ -1.54
ZNF558-205ENST00000597304 FLGP20930 4061 aaPredicted RBP5.37□□□□□ -1.55
ZNF558-205ENST00000597304 HERC1Q15751 4861 aa5.28□□□□□ -1.56
ZNF558-205ENST00000597304 MUC2Q02817 5179 aa5.26□□□□□ -1.57
ZNF558-205ENST00000597304 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
ZNF558-205ENST00000597304 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
ZNF558-205ENST00000597304 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
ZNF558-205ENST00000597304 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
ZNF558-205ENST00000597304 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
ZNF558-205ENST00000597304 BIRC6Q9NR09 4857 aa5.17□□□□□ -1.58
ZNF558-205ENST00000597304 HERC2O95714 4834 aa5.16□□□□□ -1.58
ZNF558-205ENST00000597304 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
ZNF558-205ENST00000597304 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
ZNF558-205ENST00000597304 M0R2T5 61 aa5.08□□□□□ -1.6
ZNF558-205ENST00000597304 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
ZNF558-205ENST00000597304 INE1O15225 51 aa5.02□□□□□ -1.61
ZNF558-205ENST00000597304 KRTAP10-10P60014 251 aa5□□□□□ -1.61
ZNF558-205ENST00000597304 MT1FP04733 61 aa4.99□□□□□ -1.61
ZNF558-205ENST00000597304 MT1HP80294 61 aa4.98□□□□□ -1.61
ZNF558-205ENST00000597304 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
ZNF558-205ENST00000597304 MT2AP02795 61 aa4.97□□□□□ -1.61
ZNF558-205ENST00000597304 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
ZNF558-205ENST00000597304 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
ZNF558-205ENST00000597304 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
ZNF558-205ENST00000597304 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
ZNF558-205ENST00000597304 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
ZNF558-205ENST00000597304 MT1XP80297 61 aa4.91□□□□□ -1.62
ZNF558-205ENST00000597304 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.62
ZNF558-205ENST00000597304 MT1BP07438 61 aa4.88□□□□□ -1.63
ZNF558-205ENST00000597304 UBR4Q5T4S7 5183 aa4.83□□□□□ -1.64
ZNF558-205ENST00000597304 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
ZNF558-205ENST00000597304 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
ZNF558-205ENST00000597304 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
ZNF558-205ENST00000597304 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
ZNF558-205ENST00000597304 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
ZNF558-205ENST00000597304 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
ZNF558-205ENST00000597304 LCE2BO14633 110 aa4.46□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
ZNF558-205ENST00000597304 KMT2DO14686 5537 aa4.4□□□□□ -1.7
ZNF558-205ENST00000597304 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
ZNF558-205ENST00000597304 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
ZNF558-205ENST00000597304 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
ZNF558-205ENST00000597304 USH2AO75445 5202 aa4.3□□□□□ -1.72
ZNF558-205ENST00000597304 MT1LQ93083 61 aa4.27□□□□□ -1.73
ZNF558-205ENST00000597304 MT1EP04732 61 aa4.23□□□□□ -1.73
ZNF558-205ENST00000597304 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
ZNF558-205ENST00000597304 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms