RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
ARHGEF1-213ENST00000595897 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
ARHGEF1-213ENST00000595897 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
ARHGEF1-213ENST00000595897 S4R3F8 94 aa8.9□□□□□ -0.98
ARHGEF1-213ENST00000595897 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
ARHGEF1-213ENST00000595897 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
ARHGEF1-213ENST00000595897 LRP1Q07954 4544 aaKnown RBP8.82□□□□□ -1
ARHGEF1-213ENST00000595897 P0C880 135 aa8.81□□□□□ -1
ARHGEF1-213ENST00000595897 FAT3Q8TDW7 4589 aa8.81□□□□□ -1
ARHGEF1-213ENST00000595897 XP32Q5T750 250 aa8.81□□□□□ -1
ARHGEF1-213ENST00000595897 HSPG2P98160 4391 aa8.79□□□□□ -1
ARHGEF1-213ENST00000595897 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
ARHGEF1-213ENST00000595897 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
ARHGEF1-213ENST00000595897 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
ARHGEF1-213ENST00000595897 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
ARHGEF1-213ENST00000595897 TNXBP22105 4242 aa8.7□□□□□ -1.02
ARHGEF1-213ENST00000595897 Q5VSD8 79 aa8.7□□□□□ -1.02
ARHGEF1-213ENST00000595897 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
ARHGEF1-213ENST00000595897 RYR2Q92736 4967 aa8.61□□□□□ -1.03
ARHGEF1-213ENST00000595897 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
ARHGEF1-213ENST00000595897 KRTAP21-3Q3LHN1 58 aa8.57□□□□□ -1.04
ARHGEF1-213ENST00000595897 KMT2CQ8NEZ4 4911 aaKnown RBP8.57□□□□□ -1.04
ARHGEF1-213ENST00000595897 M0QZ58 72 aa8.51□□□□□ -1.05
ARHGEF1-213ENST00000595897 LPAP08519 4548 aa8.47□□□□□ -1.05
ARHGEF1-213ENST00000595897 NDUFAF8A1L188 74 aa8.45□□□□□ -1.06
ARHGEF1-213ENST00000595897 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
ARHGEF1-213ENST00000595897 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
ARHGEF1-213ENST00000595897 LRP2P98164 4655 aa8.4□□□□□ -1.06
ARHGEF1-213ENST00000595897 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
ARHGEF1-213ENST00000595897 RYR1P21817 5038 aa8.35□□□□□ -1.07
ARHGEF1-213ENST00000595897 R4GN34 69 aa8.33□□□□□ -1.08
ARHGEF1-213ENST00000595897 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
ARHGEF1-213ENST00000595897 RYR3Q15413 4870 aa8.26□□□□□ -1.09
ARHGEF1-213ENST00000595897 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
ARHGEF1-213ENST00000595897 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
ARHGEF1-213ENST00000595897 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
ARHGEF1-213ENST00000595897 ABCA13Q86UQ4 5058 aa8.07□□□□□ -1.12
ARHGEF1-213ENST00000595897 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
ARHGEF1-213ENST00000595897 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
ARHGEF1-213ENST00000595897 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
ARHGEF1-213ENST00000595897 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
ARHGEF1-213ENST00000595897 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
ARHGEF1-213ENST00000595897 EPPK1P58107 5090 aaKnown RBP7.9□□□□□ -1.14
ARHGEF1-213ENST00000595897 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
ARHGEF1-213ENST00000595897 J3QL48 77 aa7.82□□□□□ -1.16
ARHGEF1-213ENST00000595897 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
ARHGEF1-213ENST00000595897 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
ARHGEF1-213ENST00000595897 MUC2Q02817 5179 aa7.68□□□□□ -1.18
ARHGEF1-213ENST00000595897 TNP1P09430 55 aa7.64□□□□□ -1.19
ARHGEF1-213ENST00000595897 HERC2O95714 4834 aa7.56□□□□□ -1.2
ARHGEF1-213ENST00000595897 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
ARHGEF1-213ENST00000595897 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
ARHGEF1-213ENST00000595897 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
ARHGEF1-213ENST00000595897 BIRC6Q9NR09 4857 aa7.36□□□□□ -1.23
ARHGEF1-213ENST00000595897 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
ARHGEF1-213ENST00000595897 HERC1Q15751 4861 aa7.31□□□□□ -1.24
ARHGEF1-213ENST00000595897 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
ARHGEF1-213ENST00000595897 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
ARHGEF1-213ENST00000595897 M0R2T5 61 aa7.26□□□□□ -1.25
ARHGEF1-213ENST00000595897 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
ARHGEF1-213ENST00000595897 LCE2CQ5TA81 110 aa7.21□□□□□ -1.25
ARHGEF1-213ENST00000595897 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
ARHGEF1-213ENST00000595897 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
ARHGEF1-213ENST00000595897 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
ARHGEF1-213ENST00000595897 MT1HP80294 61 aa7.04□□□□□ -1.28
ARHGEF1-213ENST00000595897 MT1FP04733 61 aa7.02□□□□□ -1.29
ARHGEF1-213ENST00000595897 MT2AP02795 61 aa6.99□□□□□ -1.29
ARHGEF1-213ENST00000595897 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
ARHGEF1-213ENST00000595897 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
ARHGEF1-213ENST00000595897 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
ARHGEF1-213ENST00000595897 KRTAP19-8Q3LI54 63 aa6.87□□□□□ -1.31
ARHGEF1-213ENST00000595897 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
ARHGEF1-213ENST00000595897 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
ARHGEF1-213ENST00000595897 KRTAP12-3P60328 96 aa6.84□□□□□ -1.32
ARHGEF1-213ENST00000595897 MT1XP80297 61 aa6.83□□□□□ -1.32
ARHGEF1-213ENST00000595897 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
ARHGEF1-213ENST00000595897 MT1BP07438 61 aa6.81□□□□□ -1.32
ARHGEF1-213ENST00000595897 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
ARHGEF1-213ENST00000595897 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
ARHGEF1-213ENST00000595897 INE1O15225 51 aa6.69□□□□□ -1.34
ARHGEF1-213ENST00000595897 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
ARHGEF1-213ENST00000595897 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.37
ARHGEF1-213ENST00000595897 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
ARHGEF1-213ENST00000595897 KMT2DO14686 5537 aa6.33□□□□□ -1.4
ARHGEF1-213ENST00000595897 USH2AO75445 5202 aa6.33□□□□□ -1.4
ARHGEF1-213ENST00000595897 LCE2BO14633 110 aa6.31□□□□□ -1.4
ARHGEF1-213ENST00000595897 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
ARHGEF1-213ENST00000595897 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
ARHGEF1-213ENST00000595897 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
ARHGEF1-213ENST00000595897 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
ARHGEF1-213ENST00000595897 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
ARHGEF1-213ENST00000595897 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
ARHGEF1-213ENST00000595897 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
ARHGEF1-213ENST00000595897 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
ARHGEF1-213ENST00000595897 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
ARHGEF1-213ENST00000595897 MT1LQ93083 61 aa5.93□□□□□ -1.46
ARHGEF1-213ENST00000595897 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
ARHGEF1-213ENST00000595897 MT1EP04732 61 aa5.89□□□□□ -1.47
ARHGEF1-213ENST00000595897 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
ARHGEF1-213ENST00000595897 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms