RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
VRK3-204ENST00000593912 LEPROTL1O95214 131 aa0.69□□□□□ -2.3
VRK3-204ENST00000593912 FABP4P15090 132 aa0.69□□□□□ -2.3
VRK3-204ENST00000593912 CXCL6P80162 114 aa0.69□□□□□ -2.3
VRK3-204ENST00000593912 CHCHD1Q96BP2 118 aaKnown RBP0.69□□□□□ -2.3
VRK3-204ENST00000593912 LOC110117498A0A087WWA1 95 aa0.68□□□□□ -2.3
VRK3-204ENST00000593912 HSBP1O75506 76 aa0.68□□□□□ -2.3
VRK3-204ENST00000593912 HIST1H4GQ99525 98 aa0.68□□□□□ -2.3
VRK3-204ENST00000593912 SNCGO76070 127 aa0.67□□□□□ -2.3
VRK3-204ENST00000593912 COA6Q5JTJ3 125 aaKnown RBP0.67□□□□□ -2.3
VRK3-204ENST00000593912 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
VRK3-204ENST00000593912 H0YGX0 51 aa0.66□□□□□ -2.3
VRK3-204ENST00000593912 S100PP25815 95 aa0.66□□□□□ -2.3
VRK3-204ENST00000593912 COX19Q49B96 90 aa0.66□□□□□ -2.3
VRK3-204ENST00000593912 Q8N9L7 120 aa0.66□□□□□ -2.3
VRK3-204ENST00000593912 ORMDL1Q9P0S3 153 aa0.66□□□□□ -2.3
VRK3-204ENST00000593912 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
VRK3-204ENST00000593912 CYP4F30PQ9H0H9 118 aa0.65□□□□□ -2.31
VRK3-204ENST00000593912 PAM16Q9Y3D7 125 aa0.65□□□□□ -2.31
VRK3-204ENST00000593912 KRTAP13-4Q3LI77 160 aa0.64□□□□□ -2.31
VRK3-204ENST00000593912 A0A1B0GX51 115 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 C9JAW5 83 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 TMEM256-PLSCR3K7ERE1 68 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 BPY2O14599 106 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 ACYP1P07311 99 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 NREPQ16612 68 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 C21orf62-AS1Q17RA5 79 aa0.63□□□□□ -2.31
VRK3-204ENST00000593912 NAA38Q9BRA0 125 aaKnown RBP0.63□□□□□ -2.31
VRK3-204ENST00000593912 DNAL4O96015 105 aa0.62□□□□□ -2.31
VRK3-204ENST00000593912 UBE2V1Q13404 147 aa0.62□□□□□ -2.31
VRK3-204ENST00000593912 CEND1Q8N111 149 aa0.62□□□□□ -2.31
VRK3-204ENST00000593912 YPEL4Q96NS1 127 aa0.62□□□□□ -2.31
VRK3-204ENST00000593912 SYS1-DBNDD2H3BUS1 97 aa0.61□□□□□ -2.31
VRK3-204ENST00000593912 KRTAP25-1Q3LHN0 102 aa0.61□□□□□ -2.31
VRK3-204ENST00000593912 LINC01545Q5VT33 79 aa0.61□□□□□ -2.31
VRK3-204ENST00000593912 PET117Q6UWS5 81 aa0.61□□□□□ -2.31
VRK3-204ENST00000593912 TRIAP1O43715 76 aa0.6□□□□□ -2.31
VRK3-204ENST00000593912 RGS21Q2M5E4 152 aa0.6□□□□□ -2.31
VRK3-204ENST00000593912 LCE3CQ5T5A8 94 aa0.6□□□□□ -2.31
VRK3-204ENST00000593912 ATOH7Q8N100 152 aa0.6□□□□□ -2.31
VRK3-204ENST00000593912 H3BQ85 93 aa0.59□□□□□ -2.31
VRK3-204ENST00000593912 TRAV22A0A0B4J277 110 aa0.58□□□□□ -2.32
VRK3-204ENST00000593912 TNP1P09430 55 aa0.57□□□□□ -2.32
VRK3-204ENST00000593912 KRTDAPP60985 99 aa0.57□□□□□ -2.32
VRK3-204ENST00000593912 SPINT4Q6UDR6 99 aa0.57□□□□□ -2.32
VRK3-204ENST00000593912 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
VRK3-204ENST00000593912 H3BS24 57 aa0.56□□□□□ -2.32
VRK3-204ENST00000593912 C14orf132Q9NPU4 83 aa0.56□□□□□ -2.32
VRK3-204ENST00000593912 A0A0B4J2C4 111 aa0.55□□□□□ -2.32
VRK3-204ENST00000593912 LOC101927531A0A1B0GV80 90 aa0.55□□□□□ -2.32
VRK3-204ENST00000593912 A0A1B0GW54 56 aa0.55□□□□□ -2.32
VRK3-204ENST00000593912 SNAPINO95295 136 aa0.55□□□□□ -2.32
VRK3-204ENST00000593912 TP53AIP1Q9HCN2 124 aa0.54□□□□□ -2.32
VRK3-204ENST00000593912 TMEM238LA0A1B0GVL6 79 aa0.53□□□□□ -2.32
VRK3-204ENST00000593912 TMEM218A2RU14 115 aa0.53□□□□□ -2.32
VRK3-204ENST00000593912 BAALC-AS2P0C853 105 aa0.53□□□□□ -2.32
VRK3-204ENST00000593912 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
VRK3-204ENST00000593912 PSMB2P49721 201 aa0.52□□□□□ -2.33
VRK3-204ENST00000593912 KRTAP12-1P59990 96 aa0.52□□□□□ -2.33
VRK3-204ENST00000593912 PRO1854Q9UHT4 67 aa0.52□□□□□ -2.33
VRK3-204ENST00000593912 TRAV7A0A075B6U4 112 aa0.5□□□□□ -2.33
VRK3-204ENST00000593912 JMJD7-PLA2G4BH0Y9G9 81 aa0.49□□□□□ -2.33
VRK3-204ENST00000593912 hCG_2014768A0A024R1R8 64 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 H0Y9P7 68 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 K7ERJ3 54 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 FXYD2P54710 66 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 LINC00208Q96KT6 92 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 SPCS1Q9Y6A9 102 aa0.48□□□□□ -2.33
VRK3-204ENST00000593912 COX6CP09669 75 aa0.47□□□□□ -2.33
VRK3-204ENST00000593912 HIST3H2BBQ8N257 126 aa0.47□□□□□ -2.33
VRK3-204ENST00000593912 HIST1H2BLQ99880 126 aa0.47□□□□□ -2.33
VRK3-204ENST00000593912 DMAC1Q96GE9 116 aa0.46□□□□□ -2.34
VRK3-204ENST00000593912 APOC3P02656 99 aa0.44□□□□□ -2.34
VRK3-204ENST00000593912 SCGB1C2P0DMR2 95 aa0.44□□□□□ -2.34
VRK3-204ENST00000593912 SNRPEP62304 92 aaKnown RBP0.44□□□□□ -2.34
VRK3-204ENST00000593912 HSBP1L1C9JCN9 74 aa0.43□□□□□ -2.34
VRK3-204ENST00000593912 COX8AP10176 69 aa0.43□□□□□ -2.34
VRK3-204ENST00000593912 ATOX1O00244 68 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BKO60814 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BJP06899 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BOP23527 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BBP33778 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BDP58876 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BCP62807 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 ATXN8Q156A1 80 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST2H2BEQ16778 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 CLLU1Q5K131 121 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.42□□□□□ -2.34
VRK3-204ENST00000593912 LCE3EQ5T5B0 92 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BHQ93079 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BNQ99877 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 HIST1H2BMQ99879 126 aa0.42□□□□□ -2.34
VRK3-204ENST00000593912 C14orf144Q96I85 54 aa0.41□□□□□ -2.34
VRK3-204ENST00000593912 A8MU10 97 aa0.39□□□□□ -2.35
VRK3-204ENST00000593912 UQCRQO14949 82 aa0.39□□□□□ -2.35
VRK3-204ENST00000593912 DLEU1O43261 78 aa0.39□□□□□ -2.35
VRK3-204ENST00000593912 ACYP2P14621 99 aa0.39□□□□□ -2.35
VRK3-204ENST00000593912 SVBPQ8N300 66 aa0.39□□□□□ -2.35
VRK3-204ENST00000593912 SPTSSBQ8NFR3 76 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms